Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11391
- Subject:
- XR_001755170.2
- Aligned Length:
- 2331
- Identities:
- 634
- Gaps:
- 1621
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGTGCAGTGGCAGGAACTTGGCTCACTGCAACCTCCGCTTCCCAGGTTCAAGTGATTCTCCTGCCTCAGCCTCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGAGTAGCTGGGATTACAGGCGCACGTCACCACACCTGGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCATGTTGGTCAGGCTGGTCTCGAACTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ACAGGCGTGAGCCACCGTGCCCGGCCGGGAGGTCACTTTAAGGAGGGCTGTCCAACTGCAAGGAGCCGCAAGCA 296
Query 1 ------------------------------------------------------------------ATGAATCC 8
||||||||
Sbjct 297 GGAAGTGAAACCACAGCACTTCAAAAAAAGAGGGAGACTGGGACAAGCGTATCTAAGAGGCTGAACATGAATCC 370
Query 9 ACAGATCAGAAATCCGATGGAGCGGATGTATCGAGACACATTCTACGACAACTTTGAAAACGAACCCATCCTCT 82
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 ACAGATCAGAAATCCGATGGAGCGGATGTATCGAGACACATTCTACGACAACTTTGAAAACGAACCCATCCTCT 444
Query 83 ATGGTCGGAGCTACACTTGGCTGTGCTATGAAGTGAAAATAAAGAGGGGCCGCTCAAATCTCCTTTGGGACACA 156
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 ATGGTCGGAGCTACACTTGGCTGTGCTATGAAGTGAAAATAAAGAGGGGCCGCTCAAATCTCCTTTGGGACACA 518
Query 157 GGGGTCTTTCGAGGCC------------------------------------AGGTGTATTTCGAGCCTCAGTA 194
|||||||||||||||| |||||||||||..|..|.||.|
Sbjct 519 GGGGTCTTTCGAGGCCCGGTACTACCCAAACGTCAGTCGAATCACAGGCAGGAGGTGTATTTCCGGTTTGAGAA 592
Query 195 CCACGCAGAAATGTGCTTCCTCTCTTGGTTCTGTGGCAACCAGCTGCCTGCTTACAAGTGTTTCCAGATCACCT 268
|||||||||||||||||||.|.|||||||||||||||||||..|||||||||.|||.|.|.|||||||||||||
Sbjct 593 CCACGCAGAAATGTGCTTCTTATCTTGGTTCTGTGGCAACCGACTGCCTGCTAACAGGCGCTTCCAGATCACCT 666
Query 269 GGTTTGTATCCTGGACCCCCTGCCCGGACTGTGTGGCGAAGCTGGCCGAATTCCTGTCTGAGCACCCCAATGTC 342
||||||||||.||||.||||||||.|..||||||||.||||.||.||.|||||.||.|||||||||||||||||
Sbjct 667 GGTTTGTATCATGGAACCCCTGCCTGCCCTGTGTGGTGAAGGTGACCAAATTCTTGGCTGAGCACCCCAATGTC 740
Query 343 ACCCTGACCATCTCCGCCGCCCGCCTCTACTACTACTGGGAAAGAGATTACCGAAGGGCGCTCTGCAGGCTGAG 416
||||||||||||||.|||||||||||||||||||||.||||.|||||||..||..|||.||||..|||||||..
Sbjct 741 ACCCTGACCATCTCTGCCGCCCGCCTCTACTACTACCGGGATAGAGATTGGCGGTGGGTGCTCCTCAGGCTGCA 814
Query 417 TCAGGCAGGAGCCCGCGTGAAGATCATGGACTATGAAGAATTTGCATACTGCTGGGAAAACTTTGTGTACAATG 490
|.|||||||.|||||.|||||||||||||||||||||||.||||||||||||||||||||||||||||.|||||
Sbjct 815 TAAGGCAGGGGCCCGTGTGAAGATCATGGACTATGAAGACTTTGCATACTGCTGGGAAAACTTTGTGTGCAATG 888
Query 491 AAGGTCAGCAATTCATGCCTTGGTACAAATTCGATGAAAATTATGCATTCCTGCACCGCACGCTAAAGGAGATT 564
|||||||||.|||||||||||||||||||||||||||.||||||||||.|||||||||||||||||||||||||
Sbjct 889 AAGGTCAGCCATTCATGCCTTGGTACAAATTCGATGACAATTATGCATCCCTGCACCGCACGCTAAAGGAGATT 962
Query 565 CTCAGG------CTAAGAATCTTCTCTGTGGCTTTTACGGCCGCCATGC-----GGAGCTGCGCT-TCTTGGAC 626
|||||| ||.|||..|.| ||| ||||| ||.|||.| || ||||||
Sbjct 963 CTCAGGTGGATCCTGAGACCCAT---TGT---------------CATGCAGAAAGGTGCTTC-CTCTCTTGG-- 1015
Query 627 CTGGTTCCTTCTTTG--------CAGT-TGGACCCGGCCCAGATCTACAGGGTCACTTGGTTCATCTCCTGGAG 691
||||.|| |.|| | ||...|.|| |.||||..||||||.||||.||..||.|||||
Sbjct 1016 --------TTCTGTGACGACATACTGTCT---CCTAACACA-AACTACGAGGTCACCTGGTACACATCTTGGAG 1077
Query 692 CCCCTGCTTCTCCTGGGGCTGTGCCGGGGAAGTGCGTGCGTTCCT--TCAGGAGAACACA--CACG-------- 753
|||.||| ||.|.| |||||.|||||.|||...|.|||||| .|||| |||| .|||
Sbjct 1078 CCCTTGC----CCAGAG--TGTGCAGGGGAGGTGGCCGAGTTCCTGGCCAGG----CACAGCAACGTGAATCTC 1141
Query 754 -------------------------------------------------------------------------- 753
Sbjct 1142 ACCATCTTCACCGCCCGCCTCTGCTACTTCTGGGATACAGATTACCAGGAGGGGCTCTGCAGCCTGAGTCAGGA 1215
Query 754 -------------------------------------------------------------------------- 753
Sbjct 1216 AGGGGCCTCCGTGAAGATCATGGGCTACAAAGATTTTGTATCTTGTTGGAAAAACTTTGTGTACAGTGATGATG 1289
Query 754 -------------------------------------------------------------------------- 753
Sbjct 1290 AGCCATTCAAGCCTTGGAAGGGACTACAAACCAACTTTCGACTTCTGAAAAGAAGGCTACGGGAGATTCTCCAG 1363
Query 754 -------------------------------------------------------------------------- 753
Sbjct 1364 TGAGGGGTCTCCCTGGGCCTCATGGTCTGTCTCTTCTAGCCTCCTGCTCATGCTGCACGGGCCTCCCCTCCATC 1437
Query 754 -------------------------------------------------------------------------- 753
Sbjct 1438 CTGCACCAGCTGTGCTTTTGCCTGGTCATCCTGAGCCCCTCCTGGCCTCAGGGCCATTCCATAGTGCCCCCCTG 1511
Query 754 -------------------------------------------------------------------------- 753
Sbjct 1512 CCTCACCACCTCCTCCCCGCTCTCCCAGGCTCTTCTTGTAGAGGCTCTCCATCCACCTCCCCAGTCCTGTTCCC 1585
Query 754 -------------------------------------------------------------------------- 753
Sbjct 1586 CCAGCCTGGGTGCCCCTAACTTGACTCTTCCCATCTCCCCAGCATAACCAAATCTTTTTTTTTTTTTTTTTTTT 1659
Query 754 -------------------------------------------------------------------------- 753
Sbjct 1660 TTGAGACGGAGTTTCACTCTGTCGCCCAGACTAGAGTGCAATGGCTGGATCTCAGCTCACTGCAAACTCTGCTT 1733
Query 754 -------------------------------------------------------------------------- 753
Sbjct 1734 ACTGGGTTCAAGTGATTCTCCTGTCTCAGCTTCTGAGTAGCTGGGATTACAGATGCCTGCCACCACGCCCAGCT 1807
Query 754 -------------------------------------------------------------------------- 753
Sbjct 1808 AATTTTTTTTTTTTTTTTTTTTTTTTTTTGTATTTTTAGTAGTGACTGGGTTTCACCATGTTGGCCAGGCTGGT 1881
Query 754 -------------------------------------------------------------------------- 753
Sbjct 1882 CTTGAACTCCTGACCTCAGGTGATCTGCCCATCTCTGTCTCCCAAAGTGCTGGGATTACGGGCGTGAGCCACCC 1955
Query 754 -------------------------------------------------------------------------- 753
Sbjct 1956 GGCTCGGCCGCACAACCAAATCTTATTAAACTCAATCTAGTCTGGCCCTGGTGACTCACGCCTTTCGGAGGCAG 2029
Query 754 -------------------------------------------------------------------------- 753
Sbjct 2030 AGGTGGGAGAATCGCTTGAGCCCAGAAGTTTGAGACCAGCCTGGGCCACACGACAAAGCCCCATTTCTACAAAA 2103
Query 754 -------------------------------------------------------------------------- 753
Sbjct 2104 AAAAATACCAAAAAAAAGCCAGATGTGGTGGCATGCACCTGTAGTTTAAGCTACTTGGGAGGATGAAGTGGGAG 2177
Query 754 -------------------------------------------------------------------------- 753
Sbjct 2178 GACTGCTTGAGCCGGGGAGGTGGAGGCTGGAGTAAACTGAGATCGCGCCACAGAACTCCAGTTTGAGCAACAGA 2251
Query 754 ------------------------------------- 753
Sbjct 2252 TCAAGACCCTGCCTGAAAATAAATCAATAAATACACT 2288
