Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_11391
Subject:
XR_001755170.2
Aligned Length:
2331
Identities:
634
Gaps:
1621

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AGTGCAGTGGCAGGAACTTGGCTCACTGCAACCTCCGCTTCCCAGGTTCAAGTGATTCTCCTGCCTCAGCCTCC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  AGAGTAGCTGGGATTACAGGCGCACGTCACCACACCTGGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CCATGTTGGTCAGGCTGGTCTCGAACTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  ACAGGCGTGAGCCACCGTGCCCGGCCGGGAGGTCACTTTAAGGAGGGCTGTCCAACTGCAAGGAGCCGCAAGCA  296

Query    1  ------------------------------------------------------------------ATGAATCC  8
                                                                              ||||||||
Sbjct  297  GGAAGTGAAACCACAGCACTTCAAAAAAAGAGGGAGACTGGGACAAGCGTATCTAAGAGGCTGAACATGAATCC  370

Query    9  ACAGATCAGAAATCCGATGGAGCGGATGTATCGAGACACATTCTACGACAACTTTGAAAACGAACCCATCCTCT  82
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  ACAGATCAGAAATCCGATGGAGCGGATGTATCGAGACACATTCTACGACAACTTTGAAAACGAACCCATCCTCT  444

Query   83  ATGGTCGGAGCTACACTTGGCTGTGCTATGAAGTGAAAATAAAGAGGGGCCGCTCAAATCTCCTTTGGGACACA  156
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  ATGGTCGGAGCTACACTTGGCTGTGCTATGAAGTGAAAATAAAGAGGGGCCGCTCAAATCTCCTTTGGGACACA  518

Query  157  GGGGTCTTTCGAGGCC------------------------------------AGGTGTATTTCGAGCCTCAGTA  194
            ||||||||||||||||                                    |||||||||||..|..|.||.|
Sbjct  519  GGGGTCTTTCGAGGCCCGGTACTACCCAAACGTCAGTCGAATCACAGGCAGGAGGTGTATTTCCGGTTTGAGAA  592

Query  195  CCACGCAGAAATGTGCTTCCTCTCTTGGTTCTGTGGCAACCAGCTGCCTGCTTACAAGTGTTTCCAGATCACCT  268
            |||||||||||||||||||.|.|||||||||||||||||||..|||||||||.|||.|.|.|||||||||||||
Sbjct  593  CCACGCAGAAATGTGCTTCTTATCTTGGTTCTGTGGCAACCGACTGCCTGCTAACAGGCGCTTCCAGATCACCT  666

Query  269  GGTTTGTATCCTGGACCCCCTGCCCGGACTGTGTGGCGAAGCTGGCCGAATTCCTGTCTGAGCACCCCAATGTC  342
            ||||||||||.||||.||||||||.|..||||||||.||||.||.||.|||||.||.|||||||||||||||||
Sbjct  667  GGTTTGTATCATGGAACCCCTGCCTGCCCTGTGTGGTGAAGGTGACCAAATTCTTGGCTGAGCACCCCAATGTC  740

Query  343  ACCCTGACCATCTCCGCCGCCCGCCTCTACTACTACTGGGAAAGAGATTACCGAAGGGCGCTCTGCAGGCTGAG  416
            ||||||||||||||.|||||||||||||||||||||.||||.|||||||..||..|||.||||..|||||||..
Sbjct  741  ACCCTGACCATCTCTGCCGCCCGCCTCTACTACTACCGGGATAGAGATTGGCGGTGGGTGCTCCTCAGGCTGCA  814

Query  417  TCAGGCAGGAGCCCGCGTGAAGATCATGGACTATGAAGAATTTGCATACTGCTGGGAAAACTTTGTGTACAATG  490
            |.|||||||.|||||.|||||||||||||||||||||||.||||||||||||||||||||||||||||.|||||
Sbjct  815  TAAGGCAGGGGCCCGTGTGAAGATCATGGACTATGAAGACTTTGCATACTGCTGGGAAAACTTTGTGTGCAATG  888

Query  491  AAGGTCAGCAATTCATGCCTTGGTACAAATTCGATGAAAATTATGCATTCCTGCACCGCACGCTAAAGGAGATT  564
            |||||||||.|||||||||||||||||||||||||||.||||||||||.|||||||||||||||||||||||||
Sbjct  889  AAGGTCAGCCATTCATGCCTTGGTACAAATTCGATGACAATTATGCATCCCTGCACCGCACGCTAAAGGAGATT  962

Query  565  CTCAGG------CTAAGAATCTTCTCTGTGGCTTTTACGGCCGCCATGC-----GGAGCTGCGCT-TCTTGGAC  626
            ||||||      ||.|||..|.|   |||               |||||     ||.|||.| || ||||||  
Sbjct  963  CTCAGGTGGATCCTGAGACCCAT---TGT---------------CATGCAGAAAGGTGCTTC-CTCTCTTGG--  1015

Query  627  CTGGTTCCTTCTTTG--------CAGT-TGGACCCGGCCCAGATCTACAGGGTCACTTGGTTCATCTCCTGGAG  691
                    ||||.||        |.|| |   ||...|.|| |.||||..||||||.||||.||..||.|||||
Sbjct 1016  --------TTCTGTGACGACATACTGTCT---CCTAACACA-AACTACGAGGTCACCTGGTACACATCTTGGAG  1077

Query  692  CCCCTGCTTCTCCTGGGGCTGTGCCGGGGAAGTGCGTGCGTTCCT--TCAGGAGAACACA--CACG--------  753
            |||.|||    ||.|.|  |||||.|||||.|||...|.||||||  .||||    ||||  .|||        
Sbjct 1078  CCCTTGC----CCAGAG--TGTGCAGGGGAGGTGGCCGAGTTCCTGGCCAGG----CACAGCAACGTGAATCTC  1141

Query  754  --------------------------------------------------------------------------  753
                                                                                      
Sbjct 1142  ACCATCTTCACCGCCCGCCTCTGCTACTTCTGGGATACAGATTACCAGGAGGGGCTCTGCAGCCTGAGTCAGGA  1215

Query  754  --------------------------------------------------------------------------  753
                                                                                      
Sbjct 1216  AGGGGCCTCCGTGAAGATCATGGGCTACAAAGATTTTGTATCTTGTTGGAAAAACTTTGTGTACAGTGATGATG  1289

Query  754  --------------------------------------------------------------------------  753
                                                                                      
Sbjct 1290  AGCCATTCAAGCCTTGGAAGGGACTACAAACCAACTTTCGACTTCTGAAAAGAAGGCTACGGGAGATTCTCCAG  1363

Query  754  --------------------------------------------------------------------------  753
                                                                                      
Sbjct 1364  TGAGGGGTCTCCCTGGGCCTCATGGTCTGTCTCTTCTAGCCTCCTGCTCATGCTGCACGGGCCTCCCCTCCATC  1437

Query  754  --------------------------------------------------------------------------  753
                                                                                      
Sbjct 1438  CTGCACCAGCTGTGCTTTTGCCTGGTCATCCTGAGCCCCTCCTGGCCTCAGGGCCATTCCATAGTGCCCCCCTG  1511

Query  754  --------------------------------------------------------------------------  753
                                                                                      
Sbjct 1512  CCTCACCACCTCCTCCCCGCTCTCCCAGGCTCTTCTTGTAGAGGCTCTCCATCCACCTCCCCAGTCCTGTTCCC  1585

Query  754  --------------------------------------------------------------------------  753
                                                                                      
Sbjct 1586  CCAGCCTGGGTGCCCCTAACTTGACTCTTCCCATCTCCCCAGCATAACCAAATCTTTTTTTTTTTTTTTTTTTT  1659

Query  754  --------------------------------------------------------------------------  753
                                                                                      
Sbjct 1660  TTGAGACGGAGTTTCACTCTGTCGCCCAGACTAGAGTGCAATGGCTGGATCTCAGCTCACTGCAAACTCTGCTT  1733

Query  754  --------------------------------------------------------------------------  753
                                                                                      
Sbjct 1734  ACTGGGTTCAAGTGATTCTCCTGTCTCAGCTTCTGAGTAGCTGGGATTACAGATGCCTGCCACCACGCCCAGCT  1807

Query  754  --------------------------------------------------------------------------  753
                                                                                      
Sbjct 1808  AATTTTTTTTTTTTTTTTTTTTTTTTTTTGTATTTTTAGTAGTGACTGGGTTTCACCATGTTGGCCAGGCTGGT  1881

Query  754  --------------------------------------------------------------------------  753
                                                                                      
Sbjct 1882  CTTGAACTCCTGACCTCAGGTGATCTGCCCATCTCTGTCTCCCAAAGTGCTGGGATTACGGGCGTGAGCCACCC  1955

Query  754  --------------------------------------------------------------------------  753
                                                                                      
Sbjct 1956  GGCTCGGCCGCACAACCAAATCTTATTAAACTCAATCTAGTCTGGCCCTGGTGACTCACGCCTTTCGGAGGCAG  2029

Query  754  --------------------------------------------------------------------------  753
                                                                                      
Sbjct 2030  AGGTGGGAGAATCGCTTGAGCCCAGAAGTTTGAGACCAGCCTGGGCCACACGACAAAGCCCCATTTCTACAAAA  2103

Query  754  --------------------------------------------------------------------------  753
                                                                                      
Sbjct 2104  AAAAATACCAAAAAAAAGCCAGATGTGGTGGCATGCACCTGTAGTTTAAGCTACTTGGGAGGATGAAGTGGGAG  2177

Query  754  --------------------------------------------------------------------------  753
                                                                                      
Sbjct 2178  GACTGCTTGAGCCGGGGAGGTGGAGGCTGGAGTAAACTGAGATCGCGCCACAGAACTCCAGTTTGAGCAACAGA  2251

Query  754  -------------------------------------  753
                                                 
Sbjct 2252  TCAAGACCCTGCCTGAAAATAAATCAATAAATACACT  2288

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