Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_11394
Subject:
XR_001749741.1
Aligned Length:
1307
Identities:
437
Gaps:
862

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GATCTCGGGTTTGTCGGGCTGAAATGTGGCGGGTCTCGGAAGGTTCCGACCTCAGTAAAGAGAGCTAACGTGTA  74

Query    1  ------------------------ATGAATCGTCACCTGTGTGTTTGGCTTTTTAGACATCCATCTCTTAATGG  50
                                    ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  TTCTTCTTTTTCTTAGATGCTGAGATGAATCGTCACCTGTGTGTTTGGCTTTTTAGACATCCATCTCTTAATGG  148

Query   51  TTACCTCCAGTGTCACATCCAGCTCCATTCTCATCAATTTAGACAGATACATCTTGATACAAGGCTGCAAGTTT  124
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  TTACCTCCAGTGTCACATCCAGCTCCATTCTCATCAATTTAGACAGATACATCTTGATACAAGGCTGCAAGTTT  222

Query  125  TTAGACAAAACAGGAATTGCATTCTTCATCTGTTAAGTAAGAATTGGTCCAGGAGATATTGCCATCAAGACACC  198
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  TTAGACAAAACAGGAATTGCATTCTTCATCTGTTAAGTAAGAATTGGTCCAGGAGATATTGCCATCAAGACACC  296

Query  199  AAGATGCTCTGGAAGCATAAAGCACTACAGAAATATATGGAGAACCTGAGTAAGGAGTACCAAACACTTGAGCA  272
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  AAGATGCTCTGGAAGCATAAAGCACTACAGAAATATATGGAGAACCTGAGTAAGGAGTACCAAACACTTGAGCA  370

Query  273  ATGTCTGCAGCATATCCCTGTGAATGAGGAAAACCGAAGGTCCTTGAACAGAAGGCATGCTGAGTTGGCACCTC  346
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  ATGTCTGCAGCATATCCCTGTGAATGAGGAAAACCGAAGGTCCTTGAACAGAAGGCATGCTGAGTTGGCACCTC  444

Query  347  TTGCAGCCATTTACCAAGAAATTCAGGAGACTGAACAAGCAATTGAAGAATTAGAATCAATGTGTAAAA-----  415
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
Sbjct  445  TTGCAGCCATTTACCAAGAAATTCAGGAGACTGAACAAGCAATTGAAGAATTAGAATCAATGTGTAAAAGCCTA  518

Query  416  ---AGACA----------GAGT--------CTTGCTCTGTGGCCCAGGCTGGAATGCAG---------------  453
               |.|||          .|||        |||||.||        ||..|.||.|||.               
Sbjct  519  AATAAACAAGATGAAAAGCAGTTACAAGAACTTGCACT--------GGAAGAAAGGCAAACCATTGATCAAAAA  584

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct  585  ATCAACATGTTGTACAATGAGCTTTTCCAGAGCCTTGTGCCAAAGGAGAAATATGACAAAAATGATGTTATTTT  658

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct  659  AGAGGTGACAGCTGGAAGGACTACTGGAGGTGACATCTGCCAACAATTTACCCGAGAAATATTTGACATGTACC  732

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct  733  AGAATTATTCGTGCTATAAACACTGGCAATTTGAACTTCTGAATTATACACCAGCAGATTATGGTGGACTACAT  806

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct  807  CATGCAGCCGCCCGAATTTCCGGTGACGGTGTCTATAAGCATTTGAAGTATGAGGGTGGGATTCACCGAGTTCA  880

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct  881  GCGCATCCCCGAGGTGGGCCTGTCCTCAAGGATGCAGCGCATTCACACAGGAACGATGTCGGTTATTGTCCTTC  954

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct  955  CTCAGCCAGATGAGGTGGATGTGAAATTGGACCCCAAGGATTTGCGAATAGATACATTTCGAGCCAAAGGAGCA  1028

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 1029  GGAGGGCAGCATGTTAATAAAACTGATAGTGCCGTCAGACTTGTCCACATCCCCACAGAGATGGGGTTTCACTG  1102

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 1103  TGTTATCCAGTATGGTCGTGATCTCCTGACCTTGTGATCCACCCGCCTTGCCTTCCCAAAATCCTCGGATTACA  1176

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 1177  GGTGTGAGCCACTGCGCCCAGCCATTATAAAGGGCTAGTAGTAGAATGCCAACAAGAAAGATCACAGATAAAAA  1250

Query  454  -------------------------------------------------  453
                                                             
Sbjct 1251  ATAAAGAAATAGCCTTTCGTGTGTTGAGAGCTAGACTCTACCAGCAGAT  1299

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