Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11399
- Subject:
- XR_001748926.2
- Aligned Length:
- 4363
- Identities:
- 765
- Gaps:
- 3598
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ACTTCCTCTCGCTTCCGCCCGCCTCCCTGGCTCGCCGGCTGGCGTCGCCACCGCCTCCTCGTCCCCGGCCACCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTGTCGCCGCTGCTGCAATTCAAGGCGCACACTATCCCACTTTCCCGCTGGAGGCGCAGAGGATGCCCCTTGAG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCAGACCTGGAGAAATAGCCCCAGGGCCCGGCAGGAGGAGCCTTGGTGGCGAGAAAGGAAATCCAGGCTCCCCT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TTCCTTAAAGCCACTGCAGCAGCTGGGAAGGCGCCCACAGAGCGGGCGCGCCAAGCGGGACGCGGGAGTCGCAG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AGAGGGACCCCGGGCGCCTGCTGAGCTCAGCTGGCAGAGTTTGCAAGTGGCGGAGACCCTTCAGGTGGCATCCC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGAGTCCTGATGCCTGACTGGATGGAGGCCCACCAGCTTCTGTTCCCATGAGGTAGAAAGGCCAAGCTTGGTCT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TCAGCTGGGGAAGAGGCCAGAAACAAGGCCCCCAGTGAAATAACCCAGATCCATTGGCCTGAGGAGCAGAGAAA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GGGCAAGAAGTGAACTGCAGCTGCTGGTAACCCTCAGAAACCTTCTCCAAGTGCTATTCTCACAGTTCTTTAGG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AACACTCTGAAGTGAAGAACAATATGTAGGAAAATGGGACCAACTTATGTGTGTTCTGAGCCTCAAAACCCCCT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TGTTGGCCCAAAGAAGCTCACCTTCAGTTTGGGAGGGCTGGTAAGCTCCATCCTTTCTCATGGCCTCAGCCAAG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CATTGAACTTGCCCTCCCCTTCTGGCCTTGGTGATCACTTTTTCAGGAAGAGTGAGACTGAGGACCCCCAAGTG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TTCCATCCCTAAGGAAAGCTTGGGAAACCAAGCCCCTTCCATCCTCTCCCAAGCACCCCAGCCAAGCCCCAGAG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AGCCAGTCCGGAATGATCCCACTATGGCCAAGCTCTGGTTCAAATTCCAGCGGTACTTCCGCCGGAAACCTGTG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CGCTTCTTTACCTTCCTGGCACTCTACCTGACTGCTGGGAGCCTTGTCTTCCTTCACTCTGGCTTTGTGGGCCA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GCCCGCTGTCTCGGGGAACCAGGCGAACCCCGCTGCTGCAGGAGGCCCAGCTGAGGGTGCTGAGCTGTCCTTCT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TGGGTGACATGCATCTGGGCAGAGGTTTCCGGGACACAGGTGAAGCCTCAAGCATTGCTCGCAGGTACGGACCC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TGGTTCAAGGGCAAGGATGGGAATGAGAGAGCCAAGCTTGGCGACTACGGTGGAGCCTGGAGCCGAGCCCTCAA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GGGGAGGGTTGTCCGGGAGAAGGAGGAAGAGCGAGATGGAAGTGCAGTGTTCCGGGGCTGCTTCCGCAGGCCCG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 ACAACCTTTCCCTGGCCTTACCCGTGACAGCTGCCATGCTGAACATGTCTGTGGACAAATGCGTGGACTTCTGC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 ACTGAGAAGGAGTACCCGCTGGCAGCTCTTGCAGGCACCGCCTGCCACTGTGGGTTTCCCACCACCCGATTCCC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GCTCCATGACAGAGAGGATGAGCAGCTCTGTGCCCAGAAGTGCAGCGCGGAGGAGTTTGAGAGCTGCGGGACTC 1554
Query 1 -----------------------------------------------ATGGACAGAAGGTTCCTGCCAGGCAAG 27
|||||||||||||||||||||||||||
Sbjct 1555 CTAGTTACTTCATTGTGTACCAGACACAAGTCCAAGACAACCGTTGCATGGACAGAAGGTTCCTGCCAGGCAAG 1628
Query 28 TCCAAGCAGCTCATTGCTTTGGCCAGCTTCCCAGGTGCTGGCAACACGTGGGCTCGCCACCTCATTGAATTGGC 101
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 TCCAAGCAGCTCATTGCTTTGGCCAGCTTCCCAGGTGCTGGCAACACGTGGGCTCGCCACCTCATTGAATTGGC 1702
Query 102 CACAGGCTTCTACACTGGCAGCTACTACTTCGATGGCTCCCTCTACAACAAAGGGTTTAAAGGTGAGCGGGACC 175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 CACAGGCTTCTACACTGGCAGCTACTACTTCGATGGCTCCCTCTACAACAAAGGGTTTAAAGGTGAGCGGGACC 1776
Query 176 ACTGGCGCAGCGGACGGACCATCTGCATCAAGACGCACGAAAGCGGCCAGAAAGAGATCGAGGCCTTCGACGCC 249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 ACTGGCGCAGCGGACGGACCATCTGCATCAAGACGCACGAAAGCGGCCAGAAAGAGATCGAGGCCTTCGACGCC 1850
Query 250 GCCATCCTGCTCATCCGCAACCCCTACAAAGCCCTCATGGCTGAGTTCAACCGCAAGTACGGCGGCCACATAGG 323
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 GCCATCCTGCTCATCCGCAACCCCTACAAAGCCCTCATGGCTGAGTTCAACCGCAAGTACGGCGGCCACATAGG 1924
Query 324 CTTTGCTGCGCATGCCCACTGGAAGGGCAA-------------------------------------------- 353
||||||||||||||||||||||||||||||
Sbjct 1925 CTTTGCTGCGCATGCCCACTGGAAGGGCAAAGTAATTTGAGAGTTTCAAGAGAGGAAGCATTGCCATAGGAGGG 1998
Query 354 -------------------------------------------------------------------------- 353
Sbjct 1999 GGCCAGGTGGACAAACATCTGCTGCTGAAACAGCTTGGATATCTATTGTGCTTTTGGAGGGATGTTTGGACTAA 2072
Query 354 -------------------------------------------------------------------------- 353
Sbjct 2073 AATGATGGAGCATGTGGAGAGTCAGGAGATACAGGAGGACAAATAGCATCGTGGACAATCATAACACTAACCAG 2146
Query 354 --------------------------AGGAGCCGTACCAGGATCTTTGCAAATCTTATTTCGCTCGATTTGCAC 401
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147 TATTTATTGAGCACCTTGCTTGTCCCAGGAGCCGTACCAGGATCTTTGCAAATCTTATTTCGCTCGATTTGCAC 2220
Query 402 AGCATCTGTAGGAGAGTGGCCAGAGTTCGTGAGGAACTATGCCCCGTGGTGGGCCACTCACACACTGGACTGGC 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221 AGCATCTGTAGGAGAGTGGCCAGAGTTCGTGAGGAACTATGCCCCGTGGTGGGCCACTCACACACTGGACTGGC 2294
Query 476 TCAAGTTTGGCAAGAAGGTGCTGGTGGTGCACTTTGAGGACCTGAAGCAGGACCTCTTTGTCCAGCTGGGCCGG 549
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295 TCAAGTTTGGCAAGAAGGTGCTGGTGGTGCACTTTGAGGACCTGAAGCAGGACCTCTTTGTCCAGCTGGGCCGG 2368
Query 550 ATGGTCAGCCTGCTGGGCGTGGCTGTCAGGGAGGACCGGCTGCTCTGTGTGGAGAGCCAGAAGGATGGCAACTT 623
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369 ATGGTCAGCCTGCTGGGCGTGGCTGTCAGGGAGGACCGGCTGCTCTGTGTGGAGAGCCAGAAGGATGGCAACTT 2442
Query 624 CAAGCGCTCAGGGCTCCGGAAGCTCGAGTATGACCCCTATACTGCGGACATGCAGAAGACCATCTCTGCCTACA 697
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2443 CAAGCGCTCAGGGCTCCGGAAGCTCGAGTATGACCCCTATACTGCGGACATGCAGAAGACCATCTCTGCCTACA 2516
Query 698 TCAAGATGGTGGATGCAGCCCTCAAAGGGCGGAACCTAACGGGTGTCCCCGATGACTACTACCCAAGA------ 765
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2517 TCAAGATGGTGGATGCAGCCCTCAAAGGGCGGAACCTAACGGGTGTCCCCGATGACTACTACCCAAGATGATGC 2590
Query 766 -------------------------------------------------------------------------- 765
Sbjct 2591 GTCCACACAGGGGGAGGGTAGACTGGGAGTCCTGACCACGCAGGCCCTGGGGACTCAAGACCCCTGGTTACCCC 2664
Query 766 -------------------------------------------------------------------------- 765
Sbjct 2665 CACTCATCTGTCCTCTCTTTGGTCTGGGGACAATCCCCTTGGCTGCTCTTTGCCTTCAATGAGTTTCCTGCATG 2738
Query 766 -------------------------------------------------------------------------- 765
Sbjct 2739 ACAGAGGAGGCTCAAGGGAAGAGATTGCCCAGGCACTACCACTCTGCTCACATGTTCCCCCCTTGGCAATGTGG 2812
Query 766 -------------------------------------------------------------------------- 765
Sbjct 2813 GGCATCTTGTTTAGGGGGTTCTAGTTACATGGACTCTTTTCTGTCTCCTGGGTCCCTGCCCCCACCACTCTGGG 2886
Query 766 -------------------------------------------------------------------------- 765
Sbjct 2887 TTCCATTTGTGGGAGGGAGGGCTCATCCACATCATGGAGACTTGCTGGATGCCCCATGGCAATTGTCAAGGCTC 2960
Query 766 -------------------------------------------------------------------------- 765
Sbjct 2961 TTGATGCAAGAGCCCAGGGGGCTATTGTAAAAACTTGGCCCCAGATGCTTGTCCCTTCTGGGCTGAGATTTCGC 3034
Query 766 -------------------------------------------------------------------------- 765
Sbjct 3035 AGCCCCCTTCTCATCTCCACCCAAGAAGTGCTGGCACCGATGTTTAACTCAGGCCACCTTCTGTTCTAAAGAAA 3108
Query 766 -------------------------------------------------------------------------- 765
Sbjct 3109 GATTGCTGGGAAGTTTCTCCGTGGCCTTAGGTTTCTGACATCCTGGATAGTGTGGGGAGGTAATGGTGCTCACA 3182
Query 766 -------------------------------------------------------------------------- 765
Sbjct 3183 GTAGGTTAATTGGAGACACCATGTGGGGCCATTGGTGTTATGAGCCCCCCAGGCCACACTGCTTCTCAGAAATG 3256
Query 766 -------------------------------------------------------------------------- 765
Sbjct 3257 AGCTGCTTGCCTTTCCACCTCCAGGGCATGAACCCTGCCCCTTTCTATCCATGCTGTGTCCAGGAGGTGACCTT 3330
Query 766 -------------------------------------------------------------------------- 765
Sbjct 3331 GAGATCCTGATACCACCTTCAAGGAACCTCAGGCACCAACAGTGAGCCCACGAGGATGGTCACATGCCATGTGC 3404
Query 766 -------------------------------------------------------------------------- 765
Sbjct 3405 AGAATTTGACTTAAGAGAGAGCCCCAGTGACACATCTCTCCATGGTGGGCTCCAGTCAGTCTTACACTGCCCTT 3478
Query 766 -------------------------------------------------------------------------- 765
Sbjct 3479 CTGACCCCTACAAATGGGTCCTTTGCTATCCAGGTGAGACAGCAAGAGTGTTCTTAATCAGATGGAACCACACC 3552
Query 766 -------------------------------------------------------------------------- 765
Sbjct 3553 CAAAATGGACCCCCACTACCTTCCCAGACCATATATCTCCCCTTGATCATAGTCCAACAGGGCCAGCTTCCCTT 3626
Query 766 -------------------------------------------------------------------------- 765
Sbjct 3627 GGGGGCCCTTTAAGGAATGGGGTGAATGAAATTGTGTCATTTCTATACAAACACTGCTCTCTTGATGCTGAAAT 3700
Query 766 -------------------------------------------------------------------------- 765
Sbjct 3701 GCCAAACCGAAGGATTTCTGAGGACCTAAATCACGGAGCATCAATCTTACAAAGTGTTGGTCCAGAGTCCCATC 3774
Query 766 -------------------------------------------------------------------------- 765
Sbjct 3775 TCTTCCCCAACCCTGGATACCAGTAGCTTCCCACCCAGTCCAAACCTGCACCATCCATCATTATGTAGATGAAA 3848
Query 766 -------------------------------------------------------------------------- 765
Sbjct 3849 AAGCCATAGGTCATAGCCTCTTTGCTATTCTATTGGAGTAGCCTCCCTAGGCAGTCCCTCTGAAGCCTTGGAGT 3922
Query 766 -------------------------------------------------------------------------- 765
Sbjct 3923 GCAGGTAAATGCTCATTCCCAAGTAGCAAAGAGACCATGGAGAAGGTGCGTGTAAAGAGATATATTTTTGTAAG 3996
Query 766 -------------------------------------------------------------------------- 765
Sbjct 3997 AGGAATATGATTAATACATTCCGCCCCTTGGAACCTGGCCATGCAAAGCAAGGGCACAGGGATTAGACCTGTGG 4070
Query 766 -------------------------------------------------------------------------- 765
Sbjct 4071 CACACTTCCCCAATTCCCTCATCTGTAGGATTTGGGCTGCCCCAGGCCCACCCAGGGGGCTCTGAATGTATTTT 4144
Query 766 -------------------------------------------------------------------------- 765
Sbjct 4145 GTACCGTGTTTCTTTCCCCCAGGAGAATTTTTAGTCTTCTTTCATGAAGCAGTGGAGGGGTTGGCCTCCCTTCT 4218
Query 766 -------------------------------------------------------------------------- 765
Sbjct 4219 ACTGGGAGGTTGACTCTCTCTGGGAGACTCTTGGTCCAAGACCTGGGTCAGTTCTTTGCTGGTGGTCCCCTCTG 4292
Query 766 ----------------------------------------------------------------------- 765
Sbjct 4293 ACCACAAGCTTCTGCCTGAAGATTCCTCAGGTCAACACCATCATTAAATGCGAGTTTTGTTGATGATTCTA 4363
