Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11428
- Subject:
- XM_006510895.4
- Aligned Length:
- 2712
- Identities:
- 1602
- Gaps:
- 942
Alignment
Query 1 ATGTCGGGACGAACGCTCACGGATCGGATCGCCGCCGCTCAGTACAGCGTTACAGGCTCTGCTGTAGCAAGAGC 74
||||||||.|.|||||||||||||||||||||||||||||||||||||||.||.||||||||||||||||||||
Sbjct 1 ATGTCGGGCCAAACGCTCACGGATCGGATCGCCGCCGCTCAGTACAGCGTGACTGGCTCTGCTGTAGCAAGAGC 74
Query 75 GGTCTGCAAAGCCACTACTCATGAAGTAATGGGCCCCAAGAAAAAGCACCTGGACTATTTGATCCAGGCTACCA 148
.||||||||||||||.||||||||.||.||||||||||||||.|||||||||||||||||||||||||||||||
Sbjct 75 AGTCTGCAAAGCCACCACTCATGAGGTGATGGGCCCCAAGAAGAAGCACCTGGACTATTTGATCCAGGCTACCA 148
Query 149 ACGAGACCAATGTTAATATTCCTCAGATGGCCGACACTCTCTTTGAGCGGGCAACAAACAGTAGCTGGGTGGTT 222
|.|||||||||||.|||||.|||||||||||||||||.||||||||||||||.||||||||||||||||||||.
Sbjct 149 ATGAGACCAATGTCAATATCCCTCAGATGGCCGACACCCTCTTTGAGCGGGCGACAAACAGTAGCTGGGTGGTG 222
Query 223 GTGTTTAAGGCTTTAGTGACAACACATCATCTCATGGTGCATGGAAATGAGAGATTTATTCAATATTTGGCTTC 296
||.|||||.|||||||||||.|||||.|||||||||||||||||||||||||||||||||||.||||||||.||
Sbjct 223 GTATTTAAAGCTTTAGTGACCACACACCATCTCATGGTGCATGGAAATGAGAGATTTATTCAGTATTTGGCCTC 296
Query 297 TAGAAATACACTATTCAATCTCAGCAATTTTTTGGACAAAAGTGGATCCCATGGTTATGATATGTCTACCTTCA 370
|||.|||||.|||||||||||||||||.|||.|.||.||||||||||||||.|||||||||||||||||.||||
Sbjct 297 TAGGAATACGCTATTCAATCTCAGCAACTTTCTAGATAAAAGTGGATCCCACGGTTATGATATGTCTACGTTCA 370
Query 371 TAAGGCGCTATAGTAGATATTTGAATGAAAAGGCTTTTTCTTACAGACAGATGGCCTTTGATTTTGCCAGGGTG 444
||.||||.||.||||||||.|||||||||||||||||.||.||||||||||||||.|||||.||||||||.|||
Sbjct 371 TACGGCGTTACAGTAGATACTTGAATGAAAAGGCTTTCTCCTACAGACAGATGGCATTTGACTTTGCCAGAGTG 444
Query 445 AAGAAAGGGGCCGATGGTGTAATGAGGACAATGGCTCCCGAAAAGCTGCTAAAGAGTATGCCAATACTACAGGG 518
|||||||||||.||.|||||.||||||||.||||.|||.||||||||.||.||||||||||||||.||.|||||
Sbjct 445 AAGAAAGGGGCTGACGGTGTCATGAGGACGATGGTTCCTGAAAAGCTCCTGAAGAGTATGCCAATCCTGCAGGG 518
Query 519 ACAAATTGATGCACTGCTTGAATTTGATGTGCATCCAAATGAACTAACAAATGGTGTCATAAATGCAGCATTTA 592
.||.||.|||||||||||.||.||||||||||||||||||||||||||.|||||||||||||||||.|||||||
Sbjct 519 GCAGATCGATGCACTGCTGGAGTTTGATGTGCATCCAAATGAACTAACCAATGGTGTCATAAATGCTGCATTTA 592
Query 593 TGCTTCTTTTCAAAGATCTTATCAAACTTTTTGCTTGCTACAATGATGGTGTTATTAACTTACTCGAAAAGTTT 666
||||||||||||||||||||||||||||.|||||||||||||||||.||.||.|||||||||||.|||||.|||
Sbjct 593 TGCTTCTTTTCAAAGATCTTATCAAACTGTTTGCTTGCTACAATGACGGCGTCATTAACTTACTTGAAAAATTT 666
Query 667 TTTGAAATGAAGAAAGGACAATGTAAAGATGCTCTAGAAATTTACAAACGATTTCTAACTAGAATGACACGAGT 740
||.||.|||||||||||.|||||.|||||.||.||||||||||||||.||||||||||||||||||||..|.||
Sbjct 667 TTCGAGATGAAGAAAGGTCAATGCAAAGACGCGCTAGAAATTTACAAGCGATTTCTAACTAGAATGACGAGGGT 740
Query 741 GTCTGAATTTCTCAAGGTTG------------------------------------------CAGAGGCTCCCA 772
|||||||||.||||||||.| ||.|||||||||
Sbjct 741 GTCTGAATTCCTCAAGGTCGCCGAGCAAGTTGGTATTGATAAAGGTGACATTCCCGACCTCACACAGGCTCCCA 814
Query 773 GCAGTCTTATGGAGACGCTTGAACAGCATCTAAATACATTAGAAGGAAAGAAACCTGGAAACAAATCTGGTGCT 846
||||||||||||||||.||||||||.|||||||||||..|||||||||||||||||||||||||||||||||||
Sbjct 815 GCAGTCTTATGGAGACCCTTGAACAACATCTAAATACCCTAGAAGGAAAGAAACCTGGAAACAAATCTGGTGCT 888
Query 847 CCCTCTCCATTAAGTAAGTCTTCTCCAGCCACAACTGTTACGTCTCCTAATTCTACACCAGCTAAAACTATTGA 920
|||||||||.|||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||.||
Sbjct 889 CCCTCTCCACTAAGTAAGTCTTCTCCAGCCACAACTGTTACATCTCCTAATTCTACACCAGCTAAAACTATCGA 962
Query 921 CACATCCCCACCGGTTGATTTATTTGCAACTGCATCTGCGGCTGTCCCAGTCAGCACTTCTAAACCATCTAGTG 994
|||||||||.||.|||||..||||||||||.|||||.|||||||.||||||||||.||.||||.|||||.||.|
Sbjct 963 CACATCCCCGCCAGTTGACATATTTGCAACAGCATCCGCGGCTGCCCCAGTCAGCTCTGCTAAGCCATCAAGCG 1036
Query 995 ATCTCCTGGACCTCCAGCCAGACTTTTCCTCTGGA---------GGGGCAGCAGCA------------------ 1041
|||||||.||.||.|||||.||||| ||||||| ||||||||||||
Sbjct 1037 ATCTCCTTGATCTTCAGCCCGACTT---CTCTGGAGCAGCTGCGGGGGCAGCAGCACCTGTAGTGCCTCCTTCT 1107
Query 1042 ---------------------------------------------GCCGCA----------------------- 1047
||.|||
Sbjct 1108 GGGGGTGCGACCGCCTGGGGAGACCTTTTGGGAGAGGATTCCTTGGCTGCACTTTCCTCTGTTCCCTGTGAAGC 1181
Query 1048 -------------------GCACCAG------------------------------------------------ 1054
|||||||
Sbjct 1182 ACCGATTTCAGACCCATTTGCACCAGAGCCTTCCCCTCCTACTACAACCACTGAGCCTGCTTCAGCCTCTGCCT 1255
Query 1055 ----CACCAC---------------------------------------------------------------- 1060
||||||
Sbjct 1256 CGACCACCACAGCTGTGACGGCTGTCACTACGGAAGTGGATCTCTTTGGAGATGCCTTTGCAGCTTCTCCTGGG 1329
Query 1061 -------------------------------CACCACCT----------------------------------- 1068
|||||.||
Sbjct 1330 GAGGCCCCTGCAGCATCCGAAGGGGCTACCGCACCAGCTACCCCGGCCCCAGTGGCTGCAGCTCTTGATGCATG 1403
Query 1069 ------------------------------------------------------GCTGGA-------------- 1074
||||||
Sbjct 1404 CTCAGGAAATGACCCTTTTGCCCCATCTGAAGGTAGCGCAGAGGCTGCACCTGAGCTGGACCTCTTTGCAATGA 1477
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 1478 AGCCACCTGAGACCAGCGCTCCTGTAGTTACCCCTACAGCTAGCACAGCCCCTCCAGTTCCCGCAACTGCTCCT 1551
Query 1075 ---------------------GGAGCCACTGC------------------------------------------ 1085
|.|||||||||
Sbjct 1552 TCTCCTGCTCCCACGGCTGTGGCAGCCACTGCTGCCACCACCACCGCCGCCGCTGCAGCTACCACCACTGCCAC 1625
Query 1086 -------------------------------------------------------------------------- 1085
Sbjct 1626 CACCTCTGCTGCTGCTGCCACCACCGCCGCTGCTCCTCCTGCTCTAGATATCTTTGGTGATTTGTTTGATTCTG 1699
Query 1086 -------------------------------------------------------------------------- 1085
Sbjct 1700 CTCCTGAAGTTGCTGCAGCACCTAAGCCAGACGCGGCTCCTAGCATAGACCTGTTTGGCACAGATGCTTTCTCC 1773
Query 1086 -------------------------------------------------------------------------- 1085
Sbjct 1774 TCCCCGCCACGAGGGGCCTCTCCGGTGCCTGAGAGTTCTCTCACTGCTGACCTCTTATCTGTGGACGCATTTGC 1847
Query 1086 -----------------------------------------------------------------ATGGGGA-- 1092
.||||||
Sbjct 1848 AGCGCCGTCTCCTGCATCCACTGCCTCTCCTGCAAAGGCGGAGTCCTCGGGTGTCATAGACCTTTTTGGGGATG 1921
Query 1093 -------------------------------------------------------------------------- 1092
Sbjct 1922 CGTTTGGAAGTGGTGCTTCTGAAACCCAGCCAGCACCACAGGCTGTTTCTAGTTCATCAGCATCGGCAGATCTA 1995
Query 1093 ------GGATTTGGGGGTTCTTTCATGGCGCCTTCCCCATCTCCAGTGACTCCAGCTCAGAATAACCTGCTACA 1160
|||||||||||||||||||||||.|||||..||.|.|||||||||||||||||||||||||||||.||
Sbjct 1996 CTAGCTGGATTTGGGGGTTCTTTCATGGCCCCTTCTACAACGCCAGTGACTCCAGCTCAGAATAACCTGCTGCA 2069
Query 1161 GCCCAATTTTGAGGCAGCTTTTGGGACAACGCCTTCAACTTCCAGCAGCAGCTCCTTTGATCCATCAGTGTTTG 1234
.||||.|||.||||||||||||||.||.||||||||.|||||.|||||||||||.|||||.|||||||||||||
Sbjct 2070 ACCCAGTTTCGAGGCAGCTTTTGGAACGACGCCTTCGACTTCAAGCAGCAGCTCTTTTGACCCATCAGTGTTTG 2143
Query 1235 ATGGTCTAGGTGATCTTTTGATGCCAACCATGGCACCAGCTGGGCAGCCTGCACCTGTCTCAATGGTACCACCC 1308
|||||.||||.||||||.||||||||||||||||||||.|.|||||||||||.||||||||||||||.||||||
Sbjct 2144 ATGGTTTAGGCGATCTTCTGATGCCAACCATGGCACCATCCGGGCAGCCTGCCCCTGTCTCAATGGTCCCACCC 2217
Query 1309 AGTCCTGCAATGGCAGCCAGCAAAGCCCTTGGAAGTGATCTTGATTCATCTCTTGCCAGCTTAGTAGGCAATCT 1382
|||||||||||||||||||||||||.|||.||||||||.|||||.||.|||||.|||||.||||||||||||||
Sbjct 2218 AGTCCTGCAATGGCAGCCAGCAAAGGCCTCGGAAGTGACCTTGACTCGTCTCTGGCCAGTTTAGTAGGCAATCT 2291
Query 1383 TGGAATTTCTGGTACCACAACAAAAAAGGGAGATCTTCAGTGGAATGCTGGAGAGAAAAAGTTGACTGGTGGAG 1456
|||.|||||||||||||||.||||||||||||||||.||||||||||||||.|||||||||.||||||||||||
Sbjct 2292 TGGGATTTCTGGTACCACATCAAAAAAGGGAGATCTCCAGTGGAATGCTGGGGAGAAAAAGCTGACTGGTGGAG 2365
Query 1457 CCAACTGGCAGCCTAAAGTAGCTCCAGCAACCTGGTCAGCAGGCGTTCCACCAAGTGCACCTTTGCAAGGAGCT 1530
||||||||||.||.|||||..|||||||.||.||||||||.||.|||||.|| ||||||..||
Sbjct 2366 CCAACTGGCAACCGAAAGTCACTCCAGCCACATGGTCAGCGGGTGTTCCCCC------------GCAAGGCACT 2427
Query 1531 GTACCTCCAACCAGTTCAGTTCCTCCTGTTGCCGGGGCCCCATCGGTTGGACAACCTGGAGCAGGATTTGGAAT 1604
||.||.||||||||.|||||.|||||.|.||||||||||||.||.|||||.|||||||||||||||||||||||
Sbjct 2428 GTTCCACCAACCAGCTCAGTCCCTCCGGGTGCCGGGGCCCCGTCCGTTGGGCAACCTGGAGCAGGATTTGGAAT 2501
Query 1605 GCCTCCTGCTGGGACAGGCATGCCCATGATGCCTCAGCAGCCGGTCATGTTTGCACAGCCCATGATGAGGCCCC 1678
|||||||.|.||||||||||||.||||||||.||||||||||.|||||||||||||||||||||||||||||.|
Sbjct 2502 GCCTCCTTCAGGGACAGGCATGACCATGATGTCTCAGCAGCCAGTCATGTTTGCACAGCCCATGATGAGGCCAC 2575
Query 1679 CCTTTGGAGCTGCCGCTGTACCTGGCACGCAGCTTTCTCCAAGCCCTACACCTGCCAGTCAGAGTCCCAAGAAA 1752
|||||||||||||.|||||.||.|||||.||||||||||||||||||||||||||||.||||||||||||||||
Sbjct 2576 CCTTTGGAGCTGCAGCTGTGCCCGGCACACAGCTTTCTCCAAGCCCTACACCTGCCACTCAGAGTCCCAAGAAA 2649
Query 1753 CCTCCAGCAAAGGACCCATTAGCGGATCTTAAC--------------- 1785
||||||||.||||||||.|||||||||||||||
Sbjct 2650 CCTCCAGCCAAGGACCCGTTAGCGGATCTTAACATCAAGGATTTCTTG 2697
