Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11428
- Subject:
- XM_006510896.4
- Aligned Length:
- 2703
- Identities:
- 1602
- Gaps:
- 933
Alignment
Query 1 ATGTCGGGACGAACGCTCACGGATCGGATCGCCGCCGCTCAGTACAGCGTTACAGGCTCTGCTGTAGCAAGAGC 74
||||||||.|.|||||||||||||||||||||||||||||||||||||||.||.||||||||||||||||||||
Sbjct 1 ATGTCGGGCCAAACGCTCACGGATCGGATCGCCGCCGCTCAGTACAGCGTGACTGGCTCTGCTGTAGCAAGAGC 74
Query 75 GGTCTGCAAAGCCACTACTCATGAAGTAATGGGCCCCAAGAAAAAGCACCTGGACTATTTGATCCAGGCTACCA 148
.||||||||||||||.||||||||.||.||||||||||||||.|||||||||||||||||||||||||||||||
Sbjct 75 AGTCTGCAAAGCCACCACTCATGAGGTGATGGGCCCCAAGAAGAAGCACCTGGACTATTTGATCCAGGCTACCA 148
Query 149 ACGAGACCAATGTTAATATTCCTCAGATGGCCGACACTCTCTTTGAGCGGGCAACAAACAGTAGCTGGGTGGTT 222
|.|||||||||||.|||||.|||||||||||||||||.||||||||||||||.||||||||||||||||||||.
Sbjct 149 ATGAGACCAATGTCAATATCCCTCAGATGGCCGACACCCTCTTTGAGCGGGCGACAAACAGTAGCTGGGTGGTG 222
Query 223 GTGTTTAAGGCTTTAGTGACAACACATCATCTCATGGTGCATGGAAATGAGAGATTTATTCAATATTTGGCTTC 296
||.|||||.|||||||||||.|||||.|||||||||||||||||||||||||||||||||||.||||||||.||
Sbjct 223 GTATTTAAAGCTTTAGTGACCACACACCATCTCATGGTGCATGGAAATGAGAGATTTATTCAGTATTTGGCCTC 296
Query 297 TAGAAATACACTATTCAATCTCAGCAATTTTTTGGACAAAAGTGGATCCCATGGTTATGATATGTCTACCTTCA 370
|||.|||||.|||||||||||||||||.|||.|.||.||||||||||||||.|||||||||||||||||.||||
Sbjct 297 TAGGAATACGCTATTCAATCTCAGCAACTTTCTAGATAAAAGTGGATCCCACGGTTATGATATGTCTACGTTCA 370
Query 371 TAAGGCGCTATAGTAGATATTTGAATGAAAAGGCTTTTTCTTACAGACAGATGGCCTTTGATTTTGCCAGGGTG 444
||.||||.||.||||||||.|||||||||||||||||.||.||||||||||||||.|||||.||||||||.|||
Sbjct 371 TACGGCGTTACAGTAGATACTTGAATGAAAAGGCTTTCTCCTACAGACAGATGGCATTTGACTTTGCCAGAGTG 444
Query 445 AAGAAAGGGGCCGATGGTGTAATGAGGACAATGGCTCCCGAAAAGCTGCTAAAGAGTATGCCAATACTACAGGG 518
|||||||||||.||.|||||.||||||||.||||.|||.||||||||.||.||||||||||||||.||.|||||
Sbjct 445 AAGAAAGGGGCTGACGGTGTCATGAGGACGATGGTTCCTGAAAAGCTCCTGAAGAGTATGCCAATCCTGCAGGG 518
Query 519 ACAAATTGATGCACTGCTTGAATTTGATGTGCATCCAAATGAACTAACAAATGGTGTCATAAATGCAGCATTTA 592
.||.||.|||||||||||.||.||||||||||||||||||||||||||.|||||||||||||||||.|||||||
Sbjct 519 GCAGATCGATGCACTGCTGGAGTTTGATGTGCATCCAAATGAACTAACCAATGGTGTCATAAATGCTGCATTTA 592
Query 593 TGCTTCTTTTCAAAGATCTTATCAAACTTTTTGCTTGCTACAATGATGGTGTTATTAACTTACTCGAAAAGTTT 666
||||||||||||||||||||||||||||.|||||||||||||||||.||.||.|||||||||||.|||||.|||
Sbjct 593 TGCTTCTTTTCAAAGATCTTATCAAACTGTTTGCTTGCTACAATGACGGCGTCATTAACTTACTTGAAAAATTT 666
Query 667 TTTGAAATGAAGAAAGGACAATGTAAAGATGCTCTAGAAATTTACAAACGATTTCTAACTAGAATGACACGAGT 740
||.||.|||||||||||.|||||.|||||.||.||||||||||||||.||||||||||||||||||||..|.||
Sbjct 667 TTCGAGATGAAGAAAGGTCAATGCAAAGACGCGCTAGAAATTTACAAGCGATTTCTAACTAGAATGACGAGGGT 740
Query 741 GTCTGAATTTCTCAAGGTTG------------------------------------------CAGAGGCTCCCA 772
|||||||||.||||||||.| ||.|||||||||
Sbjct 741 GTCTGAATTCCTCAAGGTCGCCGAGCAAGTTGGTATTGATAAAGGTGACATTCCCGACCTCACACAGGCTCCCA 814
Query 773 GCAGTCTTATGGAGACGCTTGAACAGCATCTAAATACATTAGAAGGAAAGAAACCTGGAAACAA------ATCT 840
||||||||||||||||.||||||||.|||||||||||..||||||||||||||||||||||||| ||||
Sbjct 815 GCAGTCTTATGGAGACCCTTGAACAACATCTAAATACCCTAGAAGGAAAGAAACCTGGAAACAATGAAGGATCT 888
Query 841 GGTGCTCCCTCTCCATTAAGTAAGTCTTCTCCAGCCACAACTGTTACGTCTCCTAATTCTACACCAGCTAAAAC 914
|||||||||||||||.|||||||||||||||||||||||||||||||.||||||||||||||||||||||||||
Sbjct 889 GGTGCTCCCTCTCCACTAAGTAAGTCTTCTCCAGCCACAACTGTTACATCTCCTAATTCTACACCAGCTAAAAC 962
Query 915 TATTGACACATCCCCACCGGTTGATTTATTTGCAACTGCATCTGCGGCTGTCCCAGTCAGCACTTCTAAACCAT 988
|||.|||||||||||.||.|||||..||||||||||.|||||.|||||||.||||||||||.||.||||.||||
Sbjct 963 TATCGACACATCCCCGCCAGTTGACATATTTGCAACAGCATCCGCGGCTGCCCCAGTCAGCTCTGCTAAGCCAT 1036
Query 989 CTAGTGATCTCCTGGACCTCCAGCCAGACTTTTCCTCTGGA---------GGGGCAGCAGCA------------ 1041
|.||.||||||||.||.||.|||||.||||| ||||||| ||||||||||||
Sbjct 1037 CAAGCGATCTCCTTGATCTTCAGCCCGACTT---CTCTGGAGCAGCTGCGGGGGCAGCAGCACCTGTAGTGCCT 1107
Query 1042 ------------------------------------GCCGCA-------------------------------- 1047
||.|||
Sbjct 1108 CCTTCTGGGGGTGCGACCGCCTGGGGAGATTCCTTGGCTGCACTTTCCTCTGTTCCCTGTGAAGCACCGATTTC 1181
Query 1048 ----------GCACCAG----------------------------------------------------CACCA 1059
||||||| |||||
Sbjct 1182 AGACCCATTTGCACCAGAGCCTTCCCCTCCTACTACAACCACTGAGCCTGCTTCAGCCTCTGCCTCGACCACCA 1255
Query 1060 C------------------------------------------------------------------------- 1060
|
Sbjct 1256 CAGCTGTGACGGCTGTCACTACGGAAGTGGATCTCTTTGGAGATGCCTTTGCAGCTTCTCCTGGGGAGGCCCCT 1329
Query 1061 ----------------------CACCACCT-------------------------------------------- 1068
|||||.||
Sbjct 1330 GCAGCATCCGAAGGGGCTACCGCACCAGCTACCCCGGCCCCAGTGGCTGCAGCTCTTGATGCATGCTCAGGAAA 1403
Query 1069 ---------------------------------------------GCTGGA----------------------- 1074
||||||
Sbjct 1404 TGACCCTTTTGCCCCATCTGAAGGTAGCGCAGAGGCTGCACCTGAGCTGGACCTCTTTGCAATGAAGCCACCTG 1477
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 1478 AGACCAGCGCTCCTGTAGTTACCCCTACAGCTAGCACAGCCCCTCCAGTTCCCGCAACTGCTCCTTCTCCTGCT 1551
Query 1075 ------------GGAGCCACTGC--------------------------------------------------- 1085
|.|||||||||
Sbjct 1552 CCCACGGCTGTGGCAGCCACTGCTGCCACCACCACCGCCGCCGCTGCAGCTACCACCACTGCCACCACCTCTGC 1625
Query 1086 -------------------------------------------------------------------------- 1085
Sbjct 1626 TGCTGCTGCCACCACCGCCGCTGCTCCTCCTGCTCTAGATATCTTTGGTGATTTGTTTGATTCTGCTCCTGAAG 1699
Query 1086 -------------------------------------------------------------------------- 1085
Sbjct 1700 TTGCTGCAGCACCTAAGCCAGACGCGGCTCCTAGCATAGACCTGTTTGGCACAGATGCTTTCTCCTCCCCGCCA 1773
Query 1086 -------------------------------------------------------------------------- 1085
Sbjct 1774 CGAGGGGCCTCTCCGGTGCCTGAGAGTTCTCTCACTGCTGACCTCTTATCTGTGGACGCATTTGCAGCGCCGTC 1847
Query 1086 --------------------------------------------------------ATGGGGA----------- 1092
.||||||
Sbjct 1848 TCCTGCATCCACTGCCTCTCCTGCAAAGGCGGAGTCCTCGGGTGTCATAGACCTTTTTGGGGATGCGTTTGGAA 1921
Query 1093 -----------------------------------------------------------------------GGA 1095
|||
Sbjct 1922 GTGGTGCTTCTGAAACCCAGCCAGCACCACAGGCTGTTTCTAGTTCATCAGCATCGGCAGATCTACTAGCTGGA 1995
Query 1096 TTTGGGGGTTCTTTCATGGCGCCTTCCCCATCTCCAGTGACTCCAGCTCAGAATAACCTGCTACAGCCCAATTT 1169
||||||||||||||||||||.|||||..||.|.|||||||||||||||||||||||||||||.||.||||.|||
Sbjct 1996 TTTGGGGGTTCTTTCATGGCCCCTTCTACAACGCCAGTGACTCCAGCTCAGAATAACCTGCTGCAACCCAGTTT 2069
Query 1170 TGAGGCAGCTTTTGGGACAACGCCTTCAACTTCCAGCAGCAGCTCCTTTGATCCATCAGTGTTTGATGGTCTAG 1243
.||||||||||||||.||.||||||||.|||||.|||||||||||.|||||.||||||||||||||||||.|||
Sbjct 2070 CGAGGCAGCTTTTGGAACGACGCCTTCGACTTCAAGCAGCAGCTCTTTTGACCCATCAGTGTTTGATGGTTTAG 2143
Query 1244 GTGATCTTTTGATGCCAACCATGGCACCAGCTGGGCAGCCTGCACCTGTCTCAATGGTACCACCCAGTCCTGCA 1317
|.||||||.||||||||||||||||||||.|.|||||||||||.||||||||||||||.|||||||||||||||
Sbjct 2144 GCGATCTTCTGATGCCAACCATGGCACCATCCGGGCAGCCTGCCCCTGTCTCAATGGTCCCACCCAGTCCTGCA 2217
Query 1318 ATGGCAGCCAGCAAAGCCCTTGGAAGTGATCTTGATTCATCTCTTGCCAGCTTAGTAGGCAATCTTGGAATTTC 1391
||||||||||||||||.|||.||||||||.|||||.||.|||||.|||||.|||||||||||||||||.|||||
Sbjct 2218 ATGGCAGCCAGCAAAGGCCTCGGAAGTGACCTTGACTCGTCTCTGGCCAGTTTAGTAGGCAATCTTGGGATTTC 2291
Query 1392 TGGTACCACAACAAAAAAGGGAGATCTTCAGTGGAATGCTGGAGAGAAAAAGTTGACTGGTGGAGCCAACTGGC 1465
||||||||||.||||||||||||||||.||||||||||||||.|||||||||.|||||||||||||||||||||
Sbjct 2292 TGGTACCACATCAAAAAAGGGAGATCTCCAGTGGAATGCTGGGGAGAAAAAGCTGACTGGTGGAGCCAACTGGC 2365
Query 1466 AGCCTAAAGTAGCTCCAGCAACCTGGTCAGCAGGCGTTCCACCAAGTGCACCTTTGCAAGGAGCTGTACCTCCA 1539
|.||.|||||..|||||||.||.||||||||.||.|||||.|| ||||||..||||.||.|||
Sbjct 2366 AACCGAAAGTCACTCCAGCCACATGGTCAGCGGGTGTTCCCCC------------GCAAGGCACTGTTCCACCA 2427
Query 1540 ACCAGTTCAGTTCCTCCTGTTGCCGGGGCCCCATCGGTTGGACAACCTGGAGCAGGATTTGGAATGCCTCCTGC 1613
|||||.|||||.|||||.|.||||||||||||.||.|||||.||||||||||||||||||||||||||||||.|
Sbjct 2428 ACCAGCTCAGTCCCTCCGGGTGCCGGGGCCCCGTCCGTTGGGCAACCTGGAGCAGGATTTGGAATGCCTCCTTC 2501
Query 1614 TGGGACAGGCATGCCCATGATGCCTCAGCAGCCGGTCATGTTTGCACAGCCCATGATGAGGCCCCCCTTTGGAG 1687
.||||||||||||.||||||||.||||||||||.|||||||||||||||||||||||||||||.||||||||||
Sbjct 2502 AGGGACAGGCATGACCATGATGTCTCAGCAGCCAGTCATGTTTGCACAGCCCATGATGAGGCCACCCTTTGGAG 2575
Query 1688 CTGCCGCTGTACCTGGCACGCAGCTTTCTCCAAGCCCTACACCTGCCAGTCAGAGTCCCAAGAAACCTCCAGCA 1761
||||.|||||.||.|||||.||||||||||||||||||||||||||||.||||||||||||||||||||||||.
Sbjct 2576 CTGCAGCTGTGCCCGGCACACAGCTTTCTCCAAGCCCTACACCTGCCACTCAGAGTCCCAAGAAACCTCCAGCC 2649
Query 1762 AAGGACCCATTAGCGGATCTTAAC--------------- 1785
||||||||.|||||||||||||||
Sbjct 2650 AAGGACCCGTTAGCGGATCTTAACATCAAGGATTTCTTG 2688