Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11429
- Subject:
- NM_001033117.3
- Aligned Length:
- 3230
- Identities:
- 989
- Gaps:
- 2230
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGTCATCTCAAACTAAGTTCAAGAAAGACAAAGAGATCATTGCTGAATATGAAGCCCAAATAAAAGAGATCCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CACGCAGCTGGTGGAGCAGTTCAAATGTCTGGAGCAGCAATCAGAGTCGCGACTGCAGCTGCTTCAAGACCTCC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGGAGTTTTTCCGCCGGAAAGCTGAGATTGAGCTCGAGTACTCCCGCAGCCTGGAGAAGCTGGCTGAGCGCTTC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TCCTCCAAAATCCGCAGCTCCCGGGAGCACCAGTTCAAGAAGGACCAGTACCTCCTCTCGCCTGTGAACTGTTG 296
Query 1 ----------------------------------------------------------------ATGAACAATG 10
||||||||||
Sbjct 297 GTATCTGGTTCTGCATCAGACCCGGCGGGAGAGCCGAGACCATGCCACCCTCAATGACATCTTCATGAACAATG 370
Query 11 TCATCGTCCGCCTCTCCCAGATCAGTGAGGATGTCATCAGACTCTTCAAAAAGAGCAAGGAGATTGGCCTGCAG 84
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TCATCGTCCGCCTCTCCCAGATCAGTGAGGATGTCATCAGACTCTTCAAAAAGAGCAAGGAGATTGGCCTGCAG 444
Query 85 ATGCACGAGGAGCTCCTGAAGGTGACCAATGAGCTCTACACAGTCATGAAAACCTACCACATGTACCATGCAGA 158
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 ATGCACGAGGAGCTCCTGAAGGTGACCAATGAGCTCTACACAGTCATGAAAACCTACCACATGTACCATGCAGA 518
Query 159 GAGCATCAGTGCGGAAAGCAAGCTGAAGGAGGCTGAGAAGCAGGAGGAGAAGCAGTTCAATAAGTCAGGAGACC 232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GAGCATCAGTGCGGAAAGCAAGCTGAAGGAGGCTGAGAAGCAGGAGGAGAAGCAGTTCAATAAGTCAGGAGACC 592
Query 233 TCAGCATGAACCTGCTCCGGCACGAGGACCGGCCCCAGCGCCGCAGCTCTGTGAAGAAGATTGAGAAGATGAAG 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TCAGCATGAACCTGCTCCGGCACGAGGACCGGCCCCAGCGCCGCAGCTCTGTGAAGAAGATTGAGAAGATGAAG 666
Query 307 GAGAAGAGGCAGGCCAAGTACTCTGAGAACAAGCTGAAATGCACAAAGGCCCGGAATGACTACTTGCTCAATCT 380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GAGAAGAGGCAGGCCAAGTACTCTGAGAACAAGCTGAAATGCACAAAGGCCCGGAATGACTACTTGCTCAATCT 740
Query 381 GGCAGCCACCAACGCAGCTATAAGCAAATACTACATCCATGATGTCTCTGATCTGATCGATTGCTGTGATTTGG 454
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GGCAGCCACCAACGCAGCTATAAGCAAATACTACATCCATGATGTCTCTGATCTGATCGATTGCTGTGATTTGG 814
Query 455 GCTTCCATGCCAGCCTGGCCCGCACCTTCCGGACCTATCTCTCAGCTGAATACAACCTGGAGACCTCTCGCCAC 528
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 GCTTCCATGCCAGCCTGGCCCGCACCTTCCGGACCTATCTCTCAGCTGAATACAACCTGGAGACCTCTCGCCAC 888
Query 529 GAAGGGCTGGATGTCATTGAGAATGCAGTGGACAACCTGGATTCCCGAAGTGACAAGCACACAGTCATGGACAT 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 GAAGGGCTGGATGTCATTGAGAATGCAGTGGACAACCTGGATTCCCGAAGTGACAAGCACACAGTCATGGACAT 962
Query 603 GTGCAATCAAGTCTTCTGCCCTCCACTCAAGTTCGAGTTCCAGCCCCACATGGGGGATGAGGTCTGCCAGGTCA 676
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GTGCAATCAAGTCTTCTGCCCTCCACTCAAGTTCGAGTTCCAGCCCCACATGGGGGATGAGGTCTGCCAGGTCA 1036
Query 677 GCGCTCAGCAGCCCGTCCAGACAGAACTGCTCATGCGTTATCACCAGCTGCAGTCCAGACTGGCCACCCTCAAG 750
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 GCGCTCAGCAGCCCGTCCAGACAGAACTGCTCATGCGTTATCACCAGCTGCAGTCCAGACTGGCCACCCTCAAG 1110
Query 751 ATAGAGAATGAGGAGGTTAGGAAAACCCTGGATGCCACCATGCAGACATTACAGGACATGCTGACTGTGGAGGA 824
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 ATAGAGAATGAGGAGGTTAGGAAAACCCTGGATGCCACCATGCAGACATTACAGGACATGCTGACTGTGGAGGA 1184
Query 825 CTTTGATGTCTCCGATGCCTTCCAACACAGTCGATCGACAGAGTCCGTCAAGTCGGCTGCCTCTGAGGCCTACA 898
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||
Sbjct 1185 CTTTGATGTCTCCGATGCCTTCCAACACAGTCGATCGACAGAGTCCGTCAAGTCGGCTGCCTCTGAGACCTACA 1258
Query 899 TGAGCAAGATCAACATTGCCAAGAGGAGAGCCAACCAGCAGGAAACAGAAATGTTTTATTTTACAAACGGGCCT 972
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| .|
Sbjct 1259 TGAGCAAGATCAACATTGCCAAGAGGAGAGCCAACCAGCAGGAAACAGAAATGTTTTATTTTACAAA-----AT 1327
Query 973 -----GATGATGT---------TTTCCCCAT-------TTGCCATCCAAG--------ACTC------------ 1005
||..|||| |..||.||| .|||...||||| ||||
Sbjct 1328 TTAAAGAGTATGTGAATGGCAGTAACCTCATCACCAAGCTGCAGGCCAAGCACGATTTACTCAAGCAGACCCTG 1401
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 1402 GGCGAAGGGGAAAGAGCAGAATGCGGCACCACCAGAGGAAGAAGAAATGCTCGAACCAGGAACCAGGATTCAGG 1475
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 1476 ACAAGCTATACCGCTTGTAGTCGAGAGCTGCATCCGTTACATCAATTTATATGGACTCCAGCAGCAGGGGATCT 1549
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 1550 TCAGAGTGCCAGGATCTCAGGTGGAAGTCAATGACATCAAAAATTCCTTTGAGAGAGGTGAAGACCCCCTTGTG 1623
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 1624 GACGATCAAAATGAACGAGATATCAATTCAGTCGCTGGTGTTTTAAAACTGTATTTCCGAGGACTGGAAAACCC 1697
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 1698 ACTCTTTCCTAAGGAAAGGTTTCAAGATTTGATATCTACTATTAAACTGGAGAACCCAGCCGAGAGGGTGCACC 1771
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 1772 AGATCCAACAAATCCTCGTCACCCTTCCCCGCGTGGTCATTGTGGTCATGAGATACCTCTTCGCTTTCCTCAAC 1845
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 1846 CACCTCTCCCAGTATAGCGACGAGAACATGATGGATCCCTACAACCTGGCCATCTGCTTCGGGCCTACCCTCAT 1919
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 1920 GCACATCCCTGATGGGCAGGACCCTGTGTCCTGCCAGGCACACATCAATGAAGTCATCAAAACCATCATCATCC 1993
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 1994 ATCATGAAGCCATCTTCCCCAGCCCCCGGGAGCTAGAGGGACCTGTGTATGAAAAATGCATGGCTGGAGGGGAA 2067
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 2068 GAATATTGTGACAGCCCACACAGCGAGCCAGGGGCCATCGATGAAGTTGACCATGACAATGGCACTGAGCCTCA 2141
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 2142 TACCAGCGATGAAGAAGTGGAGCAGATCGAGGCTATTGCCAAGTTTGACTACATGGGGCGGTCCCCGCGTGAGC 2215
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 2216 TATCCTTCAAGAAGGGGGCCTCGCTGCTCCTGTACCACCGCGCCTCGGAGGACTGGTGGGAGGGCCGGCACAAC 2289
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 2290 GGCGTGGATGGACTCATCCCCCATCAGTACATAGTTGTACAGGACATGGATGATGCCTTCTCCGACAGCCTGAG 2363
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 2364 CCAGAAGGCTGACAGCGAGGCCAGCAGTGGGCCATTGCTGGATGACAAGGCCTCTTCCAAAAACGACCTCCAGT 2437
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 2438 CCCCCACGGAGCACATCTCGGATTACGGCTTTGGGGGGGTGATGGGCCGAGTGCGGTTACGATCTGATGGAGCA 2511
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 2512 GCCATCCCCAGACGCCGAAGCGGGGGCGACACACACAGCCCGCCCCGGGGCCTGGGCCCCAGCATAGACACACC 2585
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 2586 ACCCCGGGCTGCTGCCTGCCCCAGCAGCCCCCACAAAATCCCCCTCACCCGGGGGAGGATCGAGAGCCCTGAGA 2659
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 2660 AGCGGAGGATGGCGACGTTCGGGAGCGCTGGCAGCATCAACTACCCTGACAAGAAGGCGCTCTCCGAAGGGCAC 2733
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 2734 TCGATGAGGTCGACCTGCGGTTCCACCAGGCACAGCAGCCTAGGGGACCACAAGTCCCTGGAGGCCGAGGCCCT 2807
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 2808 GGCAGAAGACATCGAGAAGACCATGAGCACGGCTCTGCACGAGTTGCGGGAACTCGAGAGGCAGAACACGGTCA 2881
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 2882 AGCAGGCGCCAGATGTGGTGCTGGACACCCTGGAGCCCCTGAAGAACCCGCCAGGCCCCGTCAGCTCGGAGCCC 2955
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 2956 GCCAGTCCCCTTCACACCATCGTCATCCGCGACCCCGATGCCGCCATGCGCCGCAGCAGCAGCTCCTCCACCGA 3029
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 3030 GATGATGACCACCTTCAAGCCAGCCCTGTCCGCCCGCCTGGCTGGCGCCCAGCTCCGCCCGCCCCCCATGCGGC 3103
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 3104 CCGTGCGGCCGGTGGTCCAGCACCGGTCCAGCAGCAGCAGCAGCTCGGGCGTGGGCAGCCCGGCCGTGACGCCC 3177
Query 1006 ------------------------------------------------ 1005
Sbjct 3178 ACCGAGAAGATGTTCCCCAACAGCTCAGCGGACAAGTCGGGCACCATG 3225
