Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11429
- Subject:
- XM_024453842.1
- Aligned Length:
- 3317
- Identities:
- 926
- Gaps:
- 2380
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGTCATCTCAAACTAAGTTCAAGAAAGACAAAGAGATCATTGCTGAATATGAAGCCCAAATAAAAGAGATCCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CACGCAGCTGGTGGAGCAGTTCAAATGTCTGGAGCAGCAATCAGAGTCGCGACTGCAGCTGCTTCAAGACCTCC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGGAGTTTTTCCGCCGGAAAGCTGAGATTGAGCTCGAGTACTCCCGCAGCCTGGAGAAGCTGGCTGAGCGCTTC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TCCTCCAAAATCCGCAGCTCCCGGGAGCACCAGTTCAAGAAGGACCAGTACCTCCTCTCGCCTGTGAACTGTTG 296
Query 1 ----------------------------------------------------------------ATGAACAATG 10
||||||||||
Sbjct 297 GTATCTGGTTCTGCATCAGACCCGGCGGGAGAGCCGAGACCATGCCACCCTCAATGACATCTTCATGAACAATG 370
Query 11 TCATCGTCCGCCTCTCCCAGATCAGTGAGGATGTCATCAGACTCTTCAAAAAGAGCAAGGAGATTGGCCTGCAG 84
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TCATCGTCCGCCTCTCCCAGATCAGTGAGGATGTCATCAGACTCTTCAAAAAG--------------------- 423
Query 85 ATGCACGAGGAGCTCCTGAAGGTGACCAATGAGCTCTACACAGTCATGAAAACCTACCACATGTACCATGCAGA 158
||||||||||||||||||||||||||||||||
Sbjct 424 ------------------------------------------GTCATGAAAACCTACCACATGTACCATGCAGA 455
Query 159 GAGCATCAGTGCGGAAAGCAAGCTGAAGGAGGCTGAGAAGCAGGAGGAGAAGCAGTTCAATAAGTCAGGAGACC 232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 456 GAGCATCAGTGCGGAAAGCAAGCTGAAGGAGGCTGAGAAGCAGGAGGAGAAGCAGTTCAATAAGTCAGGAGACC 529
Query 233 TCAGCATGAACCTGCTCCGGCACGAGGACCGGCCCCAGCGCCGCAGCTCTGTGAAGAAGATTGAGAAGATGAAG 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 530 TCAGCATGAACCTGCTCCGGCACGAGGACCGGCCCCAGCGCCGCAGCTCTGTGAAGAAGATTGAGAAGATGAAG 603
Query 307 GAGAAGAGGCAGGCCAAGTACTCTGAGAACAAGCTGAAATGCACAAAGGCCCGGAATGACTACTTGCTCAATCT 380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 604 GAGAAGAGGCAGGCCAAGTACTCTGAGAACAAGCTGAAATGCACAAAGGCCCGGAATGACTACTTGCTCAATCT 677
Query 381 GGCAGCCACCAACGCAGCTATAAGCAAATACTACATCCATGATGTCTCTGATCTGATCGATTGCTGTGATTTGG 454
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 678 GGCAGCCACCAACGCAGCTATAAGCAAATACTACATCCATGATGTCTCTGATCTGATCGATTGCTGTGATTTGG 751
Query 455 GCTTCCATGCCAGCCTGGCCCGCACCTTCCGGACCTATCTCTCAGCTGAATACAACCTGGAGACCTCTCGCCAC 528
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 752 GCTTCCATGCCAGCCTGGCCCGCACCTTCCGGACCTATCTCTCAGCTGAATACAACCTGGAGACCTCTCGCCAC 825
Query 529 GAAGGGCTGGATGTCATTGAGAATGCAGTGGACAACCTGGATTCCCGAAGTGACAAGCACACAGTCATGGACAT 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 826 GAAGGGCTGGATGTCATTGAGAATGCAGTGGACAACCTGGATTCCCGAAGTGACAAGCACACAGTCATGGACAT 899
Query 603 GTGCAATCAAGTCTTCTGCCCTCCACTCAAGTTCGAGTTCCAGCCCCACATGGGGGATGAGGTCTGCCAGGTCA 676
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 900 GTGCAATCAAGTCTTCTGCCCTCCACTCAAGTTCGAGTTCCAGCCCCACATGGGGGATGAGGTCTGCCAGGTCA 973
Query 677 GCGCTCAGCAGCCCGTCCAGACAGAACTGCTCATGCGTTATCACCAGCTGCAGTCCAGACTGGCCACCCTCAAG 750
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 974 GCGCTCAGCAGCCCGTCCAGACAGAACTGCTCATGCGTTATCACCAGCTGCAGTCCAGACTGGCCACCCTCAAG 1047
Query 751 ATAGAGAATGAGGAGGTTAGGAAAACCCTGGATGCCACCATGCAGACATTACAGGACATGCTGACTGTGGAGGA 824
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1048 ATAGAGAATGAGGAGGTTAGGAAAACCCTGGATGCCACCATGCAGACATTACAGGACATGCTGACTGTGGAGGA 1121
Query 825 CTTTGATGTCTCCGATGCCTTCCAACACAGTCGATCGACAGAGTCCGTCAAGTCGGCTGCCTCTGAGGCCTACA 898
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||
Sbjct 1122 CTTTGATGTCTCCGATGCCTTCCAACACAGTCGATCGACAGAGTCCGTCAAGTCGGCTGCCTCTGAGACCTACA 1195
Query 899 TGAGCAAGATCAACATTGCCAAGAGGAGAGCCAACCAGCAGGAAACAGAAATGTTTTATTTTACAAACGGGCCT 972
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| .|
Sbjct 1196 TGAGCAAGATCAACATTGCCAAGAGGAGAGCCAACCAGCAGGAAACAGAAATGTTTTATTTTACAAA-----AT 1264
Query 973 -----GATGATGT---------TTTCCCCAT-------TTGCCATCCAAG--------ACTC------------ 1005
||..|||| |..||.||| .|||...||||| ||||
Sbjct 1265 TTAAAGAGTATGTGAATGGCAGTAACCTCATCACCAAGCTGCAGGCCAAGCACGATTTACTCAAGCAGACCCTG 1338
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 1339 GGCGAAGGGGAAAGAGCAGAATGCGGCACCACCAGCAGAAGAGATGGAAGGCTTAGGCTGCCCCACTTTCCTTG 1412
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 1413 GCCGAGCTGCCCCCCTGCTCCCCACTTTGTGCCCCACCCAGCACTTCAAGGAAGAAGAAATGCTCGAACCAGGA 1486
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 1487 ACCAGGATTCAGGACAAGCTATACCGCTTGTAGTCGAGAGCTGCATCCGTTACATCAATTTATATGGACTCCAG 1560
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 1561 CAGCAGGGGATCTTCAGAGTGCCAGGATCTCAGGTGGAAGTCAATGACATCAAAAATTCCTTTGAGAGAGGTGA 1634
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 1635 AGACCCCCTTGTGGACGATCAAAATGAACGAGATATCAATTCAGTCGCTGGTGTTTTAAAACTGTATTTCCGAG 1708
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 1709 GACTGGAAAACCCACTCTTTCCTAAGGAAAGGTTTCAAGATTTGATATCTACTATTAAACTGGAGAACCCAGCC 1782
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 1783 GAGAGGGTGCACCAGATCCAACAAATCCTCGTCACCCTTCCCCGCGTGGTCATTGTGGTCATGAGATACCTCTT 1856
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 1857 CGCTTTCCTCAACCACCTCTCCCAGTATAGCGACGAGAACATGATGGATCCCTACAACCTGGCCATCTGCTTCG 1930
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 1931 GGCCTACCCTCATGCACATCCCTGATGGGCAGGACCCTGTGTCCTGCCAGGCACACATCAATGAAGTCATCAAA 2004
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 2005 ACCATCATCATCCATCATGAAGCCATCTTCCCCAGCCCCCGGGAGCTAGAGGGACCTGTGTATGAAAAATGCAT 2078
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 2079 GGCTGGAGGGGAAGAATATTGTGACAGCCCACACAGCGAGCCAGGGGCCATCGATGAAGTTGACCATGACAATG 2152
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 2153 GCACTGAGCCTCATACCAGCGATGAAGAAGTGGAGCAGATCGAGGCTATTGCCAAGTTTGACTACATGGGGCGG 2226
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 2227 TCCCCGCGTGAGCTATCCTTCAAGAAGGGGGCCTCGCTGCTCCTGTACCACCGCGCCTCGGAGGACTGGTGGGA 2300
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 2301 GGGCCGGCACAACGGCGTGGATGGACTCATCCCCCATCAGTACATAGTTGTACAGGACATGGATGATGCCTTCT 2374
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 2375 CCGACAGCCTGAGCCAGAAGGCTGACAGCGAGGCCAGCAGTGGGCCATTGCTGGATGACAAGGCCTCTTCCAAA 2448
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 2449 AACGACCTCCAGTCCCCCACGGAGCACATCTCGGATTACGGCTTTGGGGGGGTGATGGGCCGAGTGCGGTTACG 2522
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 2523 ATCTGATGGAGCAGCCATCCCCAGACGCCGAAGCGGGGGCGACACACACAGCCCGCCCCGGGGCCTGGGCCCCA 2596
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 2597 GCATAGACACACCACCCCGGGCTGCTGCCTGCCCCAGCAGCCCCCACAAAATCCCCCTCACCCGGGGGAGGATC 2670
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 2671 GAGAGCCCTGAGAAGCGGAGGATGGCGACGTTCGGGAGCGCTGGCAGCATCAACTACCCTGACAAGAAGGCGCT 2744
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 2745 CTCCGAAGGGCACTCGATGAGGTCGACCTGCGGTTCCACCAGGCACAGCAGCCTAGGGGACCACAAGTCCCTGG 2818
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 2819 AGGCCGAGGCCCTGGCAGAAGACATCGAGAAGACCATGAGCACGGCTCTGCACGAGTTGCGGGAACTCGAGAGG 2892
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 2893 CAGAACACGGTCAAGCAGGCGCCAGATGTGGTGCTGGACACCCTGGAGCCCCTGAAGAACCCGCCAGGCCCCGT 2966
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 2967 CAGCTCGGAGCCCGCCAGTCCCCTTCACACCATCGTCATCCGCGACCCCGATGCCGCCATGCGCCGCAGCAGCA 3040
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 3041 GCTCCTCCACCGAGATGATGACCACCTTCAAGCCAGCCCTGTCCGCCCGCCTGGCTGGCGCCCAGCTCCGCCCG 3114
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 3115 CCCCCCATGCGGCCCGTGCGGCCGGTGGTCCAGCACCGGTCCAGCAGCAGCAGCAGCTCGGGCGTGGGCAGCCC 3188
Query 1006 ------------------------------------------------------------- 1005
Sbjct 3189 GGCCGTGACGCCCACCGAGAAGATGTTCCCCAACAGCTCAGCGGACAAGTCGGGCACCATG 3249
