Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11435
- Subject:
- NR_153324.1
- Aligned Length:
- 3057
- Identities:
- 684
- Gaps:
- 2373
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGCTTGGCGGGCGGTGAGGCGTGGGGTGACGGGGGGATGGCGGGGGCCGGCATGCGCGCGCATGCGCCGTGGTA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AAAGGCCGGTACCTCGGGCAAGATGGCTATCAAGAGTATCGCTTCCCGCCTCCGGGGTTCCCGTCGTTTTCTGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCGGCTTCGTGGCTGGGGCTGTAGTGGGCGCTGCGGGAGCTGGGCTCGCGGCCCTGCAGTTCTTCCGGAGTCAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGCGCTGAGGGAGCGTTGACAGGGAAGCAGCCGGATGGATCTGCAGAAAAGGCTGTCTTGGAACAATTTGGATT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCCTTTAACTGGAACAGAGGCAAGGTGATGCAGACAGAAAGCATTGTAAATTTAAGCCTGATCCCAATATCCCT 370
Query 1 ---------------------------------------------------------ATGGCTCCAGCAGGAAA 17
|||||||||||||||||
Sbjct 371 CCAACCTTCAGTGCCTTCAATGAAGATTATGTTGGAAGTGGGTGGTCACGAGGACACATGGCTCCAGCAGGAAA 444
Query 18 TAACAAATTTTCAAGTAAAGCCATGGCTGAAACCTTTTACCTTTCTAACATTGTGCCTCAGGATTTTGATAATA 91
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 TAACAAATTTTCAAGTAAAGCCATGGCTGAAACCTTTTACCTTTCTAACATTGTGCCTCAGGATTTTGATAATA 518
Query 92 ATTCTGGATATTGGAACAGAATAGAAATGTACTGTCGAGAGCTGACAGAAAGGTTTGAAGATGTTTGGGTGGTA 165
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 ATTCTGGATATTGGAACAGAATAGAAATGTACTGTCGAGAGCTGACAGAAAGGTTTGAAGATGTTTGGGTGGTA 592
Query 166 TCTGGGCCTTTGACCTTACCTCAGACTAGAGGCGATGGAAAGAAAATAGTTAGTTACCAGGTGATTGGCGAGGA 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TCTGGGCCTTTGACCTTACCTCAGACTAGAGGCGATGGAAAGAAAATAGTTAGTTACCAGGTGATTGGCGAGGA 666
Query 240 CAACGTGGCAGTCCCCTCACACCTTTATAAGGTAATCCTGGCCCGCAGAAGCTCAGTATCTACCGAACCACTGG 313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CAACGTGGCAGTCCCCTCACACCTTTATAAGGTAATCCTGGCCCGCAGAAGCTCAGTATCTACCGAACCACTGG 740
Query 314 CGCTAGGGGCCTTTGTGGTACCCAATGAAGCCATCGGCTTCCAGCCCCAGTTAACTGAATTCCAAGTGAGCCTC 387
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CGCTAGGGGCCTTTGTGGTACCCAATGAAGCCATCGGCTTCCAGCCCCAGTTAACTGAATTCCAAGTGAGCCTC 814
Query 388 CAGGACCTAGAGAAGTTGTCAGGACTGGTGTTTTTTCCTCATTTGGATAGAACTAGTGATATCCGGAATATCTG 461
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CAGGACCTAGAGAAGTTGTCAGGACTGGTGTTTTTTCCTCATTTGGATAGAACTAGTGATATCCGGAATATCTG 888
Query 462 CTCTGTGGACACCTGTAAGCTCCTGGATTTCCAGGAGTTCACCTTGTACTTGAGTACAAGAAAGATTGAAGGAG 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 CTCTGTGGACACCTGTAAGCTCCTGGATTTCCAGGAGTTCACCTTGTACTTGAGTACAAGAAAGATTGAAGGAG 962
Query 536 CCCGATCAGTGCTCAGACTGGAAAAGATCATGGAAAACTTGAAGAATGCAGAGATTGAACCAGATGATTACTTT 609
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 CCCGATCAGTGCTCAGACTGGAAAAGATCATGGAAAACTTGAAGAATGCAGAGATTGAACCAGATGATTACTTT 1036
Query 610 ATGAGTCGCTATGAGAAGAAGCTAGAAGAACTCAAAGCTAAGGAGCAGTCAGGAACCCAGATAAGAAAGCCATC 683
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 ATGAGTCGCTATGAGAAGAAGCTAGAAGAACTCAAAGCTAAGGAGCAGTCAGGAACCCAGATAAGAAAGCCATC 1110
Query 684 C------------------------------------------------------------------------- 684
|
Sbjct 1111 CTAGTTTTTATCTCAAGATGTGTCATACCGTCTGTAATGAAGCAGGCATGCCCTCTTTAGGCTAACATATTTTA 1184
Query 685 -------------------------------------------------------------------------- 684
Sbjct 1185 GTGGCTTTGCTTTTTGCTTTTTAAAAAGTTTTTCTCTTTAAGAGATGTGGTCTCGCCGTGTCATCCAGGCTGGA 1258
Query 685 -------------------------------------------------------------------------- 684
Sbjct 1259 GTGCAGTGGTGGAATCATAGCTCACTATAGCCTCAAACTTCTGGGCTTAAGCAATCCTCCTGCCTCTGCCCCCT 1332
Query 685 -------------------------------------------------------------------------- 684
Sbjct 1333 GAGCAGCTGGGACTACAGGCACACACCATCACCCTCAGCTACTAGTGGCTTTGCTTTAAAGAAACAGTGGAATC 1406
Query 685 -------------------------------------------------------------------------- 684
Sbjct 1407 CTAAATTTATGACTAAAAATTCCCCCAAAAGATGAAAGATCTACAATGTTTTTGTCAGTATTATATTTGACTCA 1480
Query 685 -------------------------------------------------------------------------- 684
Sbjct 1481 GGAACTAATTATTAAGGGAGCTTTGACACCTGCAGATGGAGGGCTGATCTTGTGTCAAGTTAACAGGAAGACTG 1554
Query 685 -------------------------------------------------------------------------- 684
Sbjct 1555 CCCACAGATGACACTGCATTTGTATCCCTGTGGATGTAGAGTATTGGGAAGGCATTTGTTTAGTTTCATGCCTC 1628
Query 685 -------------------------------------------------------------------------- 684
Sbjct 1629 CAAACCATGCATTGTCTGTGATGTATCTGCCCAGCCTTCTCAGAACTCAATGTTGTACATTTTTCCCTCTAGGA 1702
Query 685 -------------------------------------------------------------------------- 684
Sbjct 1703 CCTGAATTGGTCTTGGAGGCAGCTTTTAGAAATCCTCTGTGTAGTTCCTGTCCACATGCACTATATATTTGTTT 1776
Query 685 -------------------------------------------------------------------------- 684
Sbjct 1777 CTTTTTTCTCCTCTCATGAATCTGCTCGTTTCTCTACTTCTGTCTACGTAGAAGCACTCAGCAACTAGTTTCTG 1850
Query 685 -------------------------------------------------------------------------- 684
Sbjct 1851 CTCATTAAATGTGTTCTATATACTAGGCTCAGTGCTTTACATGTGTTGTCTCACAATGACTCTCTGAGGTAAAT 1924
Query 685 -------------------------------------------------------------------------- 684
Sbjct 1925 ACACTATCCCCATTTTACCTGTGAGAAAATTGAGGCTTAGAGAGCTTAGTGTCTTACCTGAGTTTCACTTTTCC 1998
Query 685 -------------------------------------------------------------------------- 684
Sbjct 1999 AAAGTAGTCATCCACAAAGTATGAGGCAGACAGATCTAAGAGAAGAAAGACAGCTGAGGTAGATTCAAATCTTT 2072
Query 685 -------------------------------------------------------------------------- 684
Sbjct 2073 TCTGACATGGATGGTGGCTTTTTACTCAGAAATATATACCTATTTCCATGGGTATTTGTGGGCCTGAGGCATGC 2146
Query 685 -------------------------------------------------------------------------- 684
Sbjct 2147 TTGGCAAGAAGAGTCTGGTTTCTCGTCTGCTATGCAAGCCAAAGGGACTTTAATGTTCTTTGAATTGAACCCTC 2220
Query 685 -------------------------------------------------------------------------- 684
Sbjct 2221 CTTAGCTCTGTGGAAAGAGACAGTCAGGAATATTTGGGAATTAGACGGCAATACTTTGTGGGGTTTATTAGAGC 2294
Query 685 -------------------------------------------------------------------------- 684
Sbjct 2295 CCATGCTTGCCTCCAGAGATACAGTTCTTTTAGTGACCAGATACTGCCAAATTGATGTGTTCTTGCTTTCCAGG 2368
Query 685 -------------------------------------------------------------------------- 684
Sbjct 2369 TGAGCTTTTTGTTCTTAAGATTAAGAAACCTATGAAGGATCTGCAGCCAGGCATGGTGGCTCAGGCCTATAATC 2442
Query 685 -------------------------------------------------------------------------- 684
Sbjct 2443 TCAGCACTTTGGGAAATCGAGGTGGGTGGATCGCTTGAGCCCAGGAGTTTGAGACCAGCCTGGGCAACATAATG 2516
Query 685 -------------------------------------------------------------------------- 684
Sbjct 2517 AAACCCTATCTTTACAAAAAAATACAAAAATTAGCTGGGCGTGGTGGTGCACACCTGTAGTCCCAGCTACTCGG 2590
Query 685 -------------------------------------------------------------------------- 684
Sbjct 2591 GAGGCTGAAATGGGAGGATTGCTTGAGCCTGGCAGGTCAAGGCTGCGATGGGACATGGTCATGCCACTGGACGC 2664
Query 685 -------------------------------------------------------------------------- 684
Sbjct 2665 CAGCCTGGGCCACAGAGGGAGACCCTGTCTCAAAAAAAGAAAAGAAAAAAGAAAAAGGTCTGCCCACAAAATCA 2738
Query 685 -------------------------------------------------------------------------- 684
Sbjct 2739 CTAGCTTATTATTTGCTTCCTGTGTGCCTGCTTGTCTACCTAGCATAGTAGGCCAAAGGTCCAAAGGCATTTAG 2812
Query 685 -------------------------------------------------------------------------- 684
Sbjct 2813 CATTCCTAGGGGAAATTGTGGCTGTTTTTCTGAGCCAGATCTCTTGATTTGGGTTTACACGGAGTCCTTTCATG 2886
Query 685 -------------------------------------------------------------------------- 684
Sbjct 2887 GACTATCCTGAGTATTGTCAGTAAAACGTCTTGGGGCATAAGAACTTGTCTGAATCTGTCATACATACCACTGC 2960
Query 685 -------------------------------------------------------------------------- 684
Sbjct 2961 TGTCTTTTCCGAGTGGTATTACAAGAAAGATTTTTGTGGTGTGTTTGTTCTAAGAGAAATGCCAAGGCTTTCAG 3034
Query 685 ----------------------- 684
Sbjct 3035 ATAAAGATAAGATGATAATGATT 3057
