Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11435
- Subject:
- NR_153325.1
- Aligned Length:
- 3116
- Identities:
- 684
- Gaps:
- 2432
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGCTTGGCGGGCGGTGAGGCGTGGGGTGACGGGGGGATGGCGGGGGCCGGCATGCGCGCGCATGCGCCGTGGTA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AAAGGCCGGTACCTCGGGCAAGATGGCTATCAAGAGTATCGCTTCCCGCCTCCGGGGTTCCCGTCGTTTTCTGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCGGCTTCGTGGCTGGGGCTGTAGTGGGCGCTGCGGGAGCTGGGCTCGCGGCCCTGCAGTTCTTCCGGAGTCAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGCGCTGAGGGAGCGTTGACAGGGAAGCAGCCGGATGGATCTGCAGAAAAGGCTGTCTTGGAACAATTTGGATT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCCTTTAACTGGAACAGAGGTAGATTCTTCAAGTTTACACTCCTAGCATCATTGTTTCTTCTCTCTCTCAACCT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TCACCTATGGTGATGCAGACAGAAAGCATTGTAAATTTAAGCCTGATCCCAATATCCCTCCAACCTTCAGTGCC 444
Query 1 ------------------------------------------ATGGCTCCAGCAGGAAATAACAAATTTTCAAG 32
||||||||||||||||||||||||||||||||
Sbjct 445 TTCAATGAAGATTATGTTGGAAGTGGGTGGTCACGAGGACACATGGCTCCAGCAGGAAATAACAAATTTTCAAG 518
Query 33 TAAAGCCATGGCTGAAACCTTTTACCTTTCTAACATTGTGCCTCAGGATTTTGATAATAATTCTGGATATTGGA 106
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TAAAGCCATGGCTGAAACCTTTTACCTTTCTAACATTGTGCCTCAGGATTTTGATAATAATTCTGGATATTGGA 592
Query 107 ACAGAATAGAAATGTACTGTCGAGAGCTGACAGAAAGGTTTGAAGATGTTTGGGTGGTATCTGGGCCTTTGACC 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 ACAGAATAGAAATGTACTGTCGAGAGCTGACAGAAAGGTTTGAAGATGTTTGGGTGGTATCTGGGCCTTTGACC 666
Query 181 TTACCTCAGACTAGAGGCGATGGAAAGAAAATAGTTAGTTACCAGGTGATTGGCGAGGACAACGTGGCAGTCCC 254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TTACCTCAGACTAGAGGCGATGGAAAGAAAATAGTTAGTTACCAGGTGATTGGCGAGGACAACGTGGCAGTCCC 740
Query 255 CTCACACCTTTATAAGGTAATCCTGGCCCGCAGAAGCTCAGTATCTACCGAACCACTGGCGCTAGGGGCCTTTG 328
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CTCACACCTTTATAAGGTAATCCTGGCCCGCAGAAGCTCAGTATCTACCGAACCACTGGCGCTAGGGGCCTTTG 814
Query 329 TGGTACCCAATGAAGCCATCGGCTTCCAGCCCCAGTTAACTGAATTCCAAGTGAGCCTCCAGGACCTAGAGAAG 402
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TGGTACCCAATGAAGCCATCGGCTTCCAGCCCCAGTTAACTGAATTCCAAGTGAGCCTCCAGGACCTAGAGAAG 888
Query 403 TTGTCAGGACTGGTGTTTTTTCCTCATTTGGATAGAACTAGTGATATCCGGAATATCTGCTCTGTGGACACCTG 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 TTGTCAGGACTGGTGTTTTTTCCTCATTTGGATAGAACTAGTGATATCCGGAATATCTGCTCTGTGGACACCTG 962
Query 477 TAAGCTCCTGGATTTCCAGGAGTTCACCTTGTACTTGAGTACAAGAAAGATTGAAGGAGCCCGATCAGTGCTCA 550
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 TAAGCTCCTGGATTTCCAGGAGTTCACCTTGTACTTGAGTACAAGAAAGATTGAAGGAGCCCGATCAGTGCTCA 1036
Query 551 GACTGGAAAAGATCATGGAAAACTTGAAGAATGCAGAGATTGAACCAGATGATTACTTTATGAGTCGCTATGAG 624
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 GACTGGAAAAGATCATGGAAAACTTGAAGAATGCAGAGATTGAACCAGATGATTACTTTATGAGTCGCTATGAG 1110
Query 625 AAGAAGCTAGAAGAACTCAAAGCTAAGGAGCAGTCAGGAACCCAGATAAGAAAGCCATCC-------------- 684
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 AAGAAGCTAGAAGAACTCAAAGCTAAGGAGCAGTCAGGAACCCAGATAAGAAAGCCATCCTAGTTTTTATCTCA 1184
Query 685 -------------------------------------------------------------------------- 684
Sbjct 1185 AGATGTGTCATACCGTCTGTAATGAAGCAGGCATGCCCTCTTTAGGCTAACATATTTTAGTGGCTTTGCTTTTT 1258
Query 685 -------------------------------------------------------------------------- 684
Sbjct 1259 GCTTTTTAAAAAGTTTTTCTCTTTAAGAGATGTGGTCTCGCCGTGTCATCCAGGCTGGAGTGCAGTGGTGGAAT 1332
Query 685 -------------------------------------------------------------------------- 684
Sbjct 1333 CATAGCTCACTATAGCCTCAAACTTCTGGGCTTAAGCAATCCTCCTGCCTCTGCCCCCTGAGCAGCTGGGACTA 1406
Query 685 -------------------------------------------------------------------------- 684
Sbjct 1407 CAGGCACACACCATCACCCTCAGCTACTAGTGGCTTTGCTTTAAAGAAACAGTGGAATCCTAAATTTATGACTA 1480
Query 685 -------------------------------------------------------------------------- 684
Sbjct 1481 AAAATTCCCCCAAAAGATGAAAGATCTACAATGTTTTTGTCAGTATTATATTTGACTCAGGAACTAATTATTAA 1554
Query 685 -------------------------------------------------------------------------- 684
Sbjct 1555 GGGAGCTTTGACACCTGCAGATGGAGGGCTGATCTTGTGTCAAGTTAACAGGAAGACTGCCCACAGATGACACT 1628
Query 685 -------------------------------------------------------------------------- 684
Sbjct 1629 GCATTTGTATCCCTGTGGATGTAGAGTATTGGGAAGGCATTTGTTTAGTTTCATGCCTCCAAACCATGCATTGT 1702
Query 685 -------------------------------------------------------------------------- 684
Sbjct 1703 CTGTGATGTATCTGCCCAGCCTTCTCAGAACTCAATGTTGTACATTTTTCCCTCTAGGACCTGAATTGGTCTTG 1776
Query 685 -------------------------------------------------------------------------- 684
Sbjct 1777 GAGGCAGCTTTTAGAAATCCTCTGTGTAGTTCCTGTCCACATGCACTATATATTTGTTTCTTTTTTCTCCTCTC 1850
Query 685 -------------------------------------------------------------------------- 684
Sbjct 1851 ATGAATCTGCTCGTTTCTCTACTTCTGTCTACGTAGAAGCACTCAGCAACTAGTTTCTGCTCATTAAATGTGTT 1924
Query 685 -------------------------------------------------------------------------- 684
Sbjct 1925 CTATATACTAGGCTCAGTGCTTTACATGTGTTGTCTCACAATGACTCTCTGAGGTAAATACACTATCCCCATTT 1998
Query 685 -------------------------------------------------------------------------- 684
Sbjct 1999 TACCTGTGAGAAAATTGAGGCTTAGAGAGCTTAGTGTCTTACCTGAGTTTCACTTTTCCAAAGTAGTCATCCAC 2072
Query 685 -------------------------------------------------------------------------- 684
Sbjct 2073 AAAGTATGAGGCAGACAGATCTAAGAGAAGAAAGACAGCTGAGGTAGATTCAAATCTTTTCTGACATGGATGGT 2146
Query 685 -------------------------------------------------------------------------- 684
Sbjct 2147 GGCTTTTTACTCAGAAATATATACCTATTTCCATGGGTATTTGTGGGCCTGAGGCATGCTTGGCAAGAAGAGTC 2220
Query 685 -------------------------------------------------------------------------- 684
Sbjct 2221 TGGTTTCTCGTCTGCTATGCAAGCCAAAGGGACTTTAATGTTCTTTGAATTGAACCCTCCTTAGCTCTGTGGAA 2294
Query 685 -------------------------------------------------------------------------- 684
Sbjct 2295 AGAGACAGTCAGGAATATTTGGGAATTAGACGGCAATACTTTGTGGGGTTTATTAGAGCCCATGCTTGCCTCCA 2368
Query 685 -------------------------------------------------------------------------- 684
Sbjct 2369 GAGATACAGTTCTTTTAGTGACCAGATACTGCCAAATTGATGTGTTCTTGCTTTCCAGGTGAGCTTTTTGTTCT 2442
Query 685 -------------------------------------------------------------------------- 684
Sbjct 2443 TAAGATTAAGAAACCTATGAAGGATCTGCAGCCAGGCATGGTGGCTCAGGCCTATAATCTCAGCACTTTGGGAA 2516
Query 685 -------------------------------------------------------------------------- 684
Sbjct 2517 ATCGAGGTGGGTGGATCGCTTGAGCCCAGGAGTTTGAGACCAGCCTGGGCAACATAATGAAACCCTATCTTTAC 2590
Query 685 -------------------------------------------------------------------------- 684
Sbjct 2591 AAAAAAATACAAAAATTAGCTGGGCGTGGTGGTGCACACCTGTAGTCCCAGCTACTCGGGAGGCTGAAATGGGA 2664
Query 685 -------------------------------------------------------------------------- 684
Sbjct 2665 GGATTGCTTGAGCCTGGCAGGTCAAGGCTGCGATGGGACATGGTCATGCCACTGGACGCCAGCCTGGGCCACAG 2738
Query 685 -------------------------------------------------------------------------- 684
Sbjct 2739 AGGGAGACCCTGTCTCAAAAAAAGAAAAGAAAAAAGAAAAAGGTCTGCCCACAAAATCACTAGCTTATTATTTG 2812
Query 685 -------------------------------------------------------------------------- 684
Sbjct 2813 CTTCCTGTGTGCCTGCTTGTCTACCTAGCATAGTAGGCCAAAGGTCCAAAGGCATTTAGCATTCCTAGGGGAAA 2886
Query 685 -------------------------------------------------------------------------- 684
Sbjct 2887 TTGTGGCTGTTTTTCTGAGCCAGATCTCTTGATTTGGGTTTACACGGAGTCCTTTCATGGACTATCCTGAGTAT 2960
Query 685 -------------------------------------------------------------------------- 684
Sbjct 2961 TGTCAGTAAAACGTCTTGGGGCATAAGAACTTGTCTGAATCTGTCATACATACCACTGCTGTCTTTTCCGAGTG 3034
Query 685 -------------------------------------------------------------------------- 684
Sbjct 3035 GTATTACAAGAAAGATTTTTGTGGTGTGTTTGTTCTAAGAGAAATGCCAAGGCTTTCAGATAAAGATAAGATGA 3108
Query 685 -------- 684
Sbjct 3109 TAATGATT 3116
