Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_11435
Subject:
NR_153328.1
Aligned Length:
3352
Identities:
684
Gaps:
2668

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AGCTTGGCGGGCGGTGAGGCGTGGGGTGACGGGGGGATGGCGGGGGCCGGCATGCGCGCGCATGCGCCGTGGTA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  AAAGGCCGGTACCTCGGGCAAGATGGCTATCAAGAGTATCGCTTCCCGCCTCCGGGGTTCCCGTCGTTTTCTGA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GCGGCTTCGTGGCTGGGGCTGTAGTGGGCGCTGCGGGAGCTGGGCTCGCGGCCCTGCAGTTCTTCCGGAGTCAG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GGCGCTGAGGGAGCGTTGACAGGGAAGCAGCCGGATGGATCTGCAGAAAAGGCTGTCTTGGAACAATTTGGATT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CCCTTTAACTGGAACAGAGGCAAGGTGTTACACTAATCACGCTTTGTCTTATGATCAGGCAAAGCGGGTGCCTA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GATGGGTTCTTGAACATATTTCCAAAAGCAAGATAATGGGTAGATTCTTCAAGTTTACACTCCTAGCATCATTG  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  TTTCTTCTCTCTCTCAACCTTCACCTATGGCTGGTCTTGAATTTCTGGGTTCAAGTGACCCTCCTGCCTCAGCC  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  TCCTGAGTAGCTGGGATTACAGGGACTACATGGAAGGTTGTCTTGGCACTGAACGGAGAAAGGTCAAAAGGAAG  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  ATAAAAAGTTTGTTCCAGAGAAGGTGATGCAGACAGAAAGCATTGTAAATTTAAGCCTGATCCCAATATCCCTC  666

Query    1  --------------------------------------------------------ATGGCTCCAGCAGGAAAT  18
                                                                    ||||||||||||||||||
Sbjct  667  CAACCTTCAGTGCCTTCAATGAAGATTATGTTGGAAGTGGGTGGTCACGAGGACACATGGCTCCAGCAGGAAAT  740

Query   19  AACAAATTTTCAAGTAAAGCCATGGCTGAAACCTTTTACCTTTCTAACATTGTGCCTCAGGATTTTGATAATAA  92
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  AACAAATTTTCAAGTAAAGCCATGGCTGAAACCTTTTACCTTTCTAACATTGTGCCTCAGGATTTTGATAATAA  814

Query   93  TTCTGGATATTGGAACAGAATAGAAATGTACTGTCGAGAGCTGACAGAAAGGTTTGAAGATGTTTGGGTGGTAT  166
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  TTCTGGATATTGGAACAGAATAGAAATGTACTGTCGAGAGCTGACAGAAAGGTTTGAAGATGTTTGGGTGGTAT  888

Query  167  CTGGGCCTTTGACCTTACCTCAGACTAGAGGCGATGGAAAGAAAATAGTTAGTTACCAGGTGATTGGCGAGGAC  240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  CTGGGCCTTTGACCTTACCTCAGACTAGAGGCGATGGAAAGAAAATAGTTAGTTACCAGGTGATTGGCGAGGAC  962

Query  241  AACGTGGCAGTCCCCTCACACCTTTATAAGGTAATCCTGGCCCGCAGAAGCTCAGTATCTACCGAACCACTGGC  314
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  AACGTGGCAGTCCCCTCACACCTTTATAAGGTAATCCTGGCCCGCAGAAGCTCAGTATCTACCGAACCACTGGC  1036

Query  315  GCTAGGGGCCTTTGTGGTACCCAATGAAGCCATCGGCTTCCAGCCCCAGTTAACTGAATTCCAAGTGAGCCTCC  388
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  GCTAGGGGCCTTTGTGGTACCCAATGAAGCCATCGGCTTCCAGCCCCAGTTAACTGAATTCCAAGTGAGCCTCC  1110

Query  389  AGGACCTAGAGAAGTTGTCAGGACTGGTGTTTTTTCCTCATTTGGATAGAACTAGTGATATCCGGAATATCTGC  462
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  AGGACCTAGAGAAGTTGTCAGGACTGGTGTTTTTTCCTCATTTGGATAGAACTAGTGATATCCGGAATATCTGC  1184

Query  463  TCTGTGGACACCTGTAAGCTCCTGGATTTCCAGGAGTTCACCTTGTACTTGAGTACAAGAAAGATTGAAGGAGC  536
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  TCTGTGGACACCTGTAAGCTCCTGGATTTCCAGGAGTTCACCTTGTACTTGAGTACAAGAAAGATTGAAGGAGC  1258

Query  537  CCGATCAGTGCTCAGACTGGAAAAGATCATGGAAAACTTGAAGAATGCAGAGATTGAACCAGATGATTACTTTA  610
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  CCGATCAGTGCTCAGACTGGAAAAGATCATGGAAAACTTGAAGAATGCAGAGATTGAACCAGATGATTACTTTA  1332

Query  611  TGAGTCGCTATGAGAAGAAGCTAGAAGAACTCAAAGCTAAGGAGCAGTCAGGAACCCAGATAAGAAAGCCATCC  684
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  TGAGTCGCTATGAGAAGAAGCTAGAAGAACTCAAAGCTAAGGAGCAGTCAGGAACCCAGATAAGAAAGCCATCC  1406

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 1407  TAGTTTTTATCTCAAGATGTGTCATACCGTCTGTAATGAAGCAGGCATGCCCTCTTTAGGCTAACATATTTTAG  1480

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 1481  TGGCTTTGCTTTTTGCTTTTTAAAAAGTTTTTCTCTTTAAGAGATGTGGTCTCGCCGTGTCATCCAGGCTGGAG  1554

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 1555  TGCAGTGGTGGAATCATAGCTCACTATAGCCTCAAACTTCTGGGCTTAAGCAATCCTCCTGCCTCTGCCCCCTG  1628

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 1629  AGCAGCTGGGACTACAGGCACACACCATCACCCTCAGCTACTAGTGGCTTTGCTTTAAAGAAACAGTGGAATCC  1702

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 1703  TAAATTTATGACTAAAAATTCCCCCAAAAGATGAAAGATCTACAATGTTTTTGTCAGTATTATATTTGACTCAG  1776

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 1777  GAACTAATTATTAAGGGAGCTTTGACACCTGCAGATGGAGGGCTGATCTTGTGTCAAGTTAACAGGAAGACTGC  1850

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 1851  CCACAGATGACACTGCATTTGTATCCCTGTGGATGTAGAGTATTGGGAAGGCATTTGTTTAGTTTCATGCCTCC  1924

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 1925  AAACCATGCATTGTCTGTGATGTATCTGCCCAGCCTTCTCAGAACTCAATGTTGTACATTTTTCCCTCTAGGAC  1998

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 1999  CTGAATTGGTCTTGGAGGCAGCTTTTAGAAATCCTCTGTGTAGTTCCTGTCCACATGCACTATATATTTGTTTC  2072

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 2073  TTTTTTCTCCTCTCATGAATCTGCTCGTTTCTCTACTTCTGTCTACGTAGAAGCACTCAGCAACTAGTTTCTGC  2146

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 2147  TCATTAAATGTGTTCTATATACTAGGCTCAGTGCTTTACATGTGTTGTCTCACAATGACTCTCTGAGGTAAATA  2220

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 2221  CACTATCCCCATTTTACCTGTGAGAAAATTGAGGCTTAGAGAGCTTAGTGTCTTACCTGAGTTTCACTTTTCCA  2294

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 2295  AAGTAGTCATCCACAAAGTATGAGGCAGACAGATCTAAGAGAAGAAAGACAGCTGAGGTAGATTCAAATCTTTT  2368

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 2369  CTGACATGGATGGTGGCTTTTTACTCAGAAATATATACCTATTTCCATGGGTATTTGTGGGCCTGAGGCATGCT  2442

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 2443  TGGCAAGAAGAGTCTGGTTTCTCGTCTGCTATGCAAGCCAAAGGGACTTTAATGTTCTTTGAATTGAACCCTCC  2516

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 2517  TTAGCTCTGTGGAAAGAGACAGTCAGGAATATTTGGGAATTAGACGGCAATACTTTGTGGGGTTTATTAGAGCC  2590

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 2591  CATGCTTGCCTCCAGAGATACAGTTCTTTTAGTGACCAGATACTGCCAAATTGATGTGTTCTTGCTTTCCAGGT  2664

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 2665  GAGCTTTTTGTTCTTAAGATTAAGAAACCTATGAAGGATCTGCAGCCAGGCATGGTGGCTCAGGCCTATAATCT  2738

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 2739  CAGCACTTTGGGAAATCGAGGTGGGTGGATCGCTTGAGCCCAGGAGTTTGAGACCAGCCTGGGCAACATAATGA  2812

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 2813  AACCCTATCTTTACAAAAAAATACAAAAATTAGCTGGGCGTGGTGGTGCACACCTGTAGTCCCAGCTACTCGGG  2886

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 2887  AGGCTGAAATGGGAGGATTGCTTGAGCCTGGCAGGTCAAGGCTGCGATGGGACATGGTCATGCCACTGGACGCC  2960

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 2961  AGCCTGGGCCACAGAGGGAGACCCTGTCTCAAAAAAAGAAAAGAAAAAAGAAAAAGGTCTGCCCACAAAATCAC  3034

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 3035  TAGCTTATTATTTGCTTCCTGTGTGCCTGCTTGTCTACCTAGCATAGTAGGCCAAAGGTCCAAAGGCATTTAGC  3108

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 3109  ATTCCTAGGGGAAATTGTGGCTGTTTTTCTGAGCCAGATCTCTTGATTTGGGTTTACACGGAGTCCTTTCATGG  3182

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 3183  ACTATCCTGAGTATTGTCAGTAAAACGTCTTGGGGCATAAGAACTTGTCTGAATCTGTCATACATACCACTGCT  3256

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 3257  GTCTTTTCCGAGTGGTATTACAAGAAAGATTTTTGTGGTGTGTTTGTTCTAAGAGAAATGCCAAGGCTTTCAGA  3330

Query  685  ----------------------  684
                                  
Sbjct 3331  TAAAGATAAGATGATAATGATT  3352

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