Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11435
- Subject:
- XR_940530.3
- Aligned Length:
- 2150
- Identities:
- 684
- Gaps:
- 1466
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGCGCGCGCATGCGCCGTGGTAAAAGGCCGGTACCTCGGGCAAGATGGCTATCAAGAGTATCGCTTCCCGCCT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCGGGGTTCCCGTCGTTTTCTGAGCGGCTTCGTGGCTGGGGCTGTAGTGGGCGCTGCGGGAGCTGGGCTCGCGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCCTGCAGTTCTTCCGGAGTCAGGGCGCTGAGGGAGCGTTGACAGGGAAGCAGCCGGATGGATCTGCAGAAAAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCTGTCTTGGAACAATTTGGATTCCCTTTAACTGGAACAGAGGCAAGGTGTTACACTAATCACGCTTTGTCTTA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGATCAGGCAAAGCGGGTGCCTAGATGGGTTCTTGAACATATTTCCAAAAGCAAGATAATGGGTGATGCAGACA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GAAAGCATTGTAAATTTAAGCCTGATCCCAATATCCCTCCAACCTTCAGTGCCTTCAATGAAGATTATGTTGGA 444
Query 1 ---------------------ATGGCTCCAGCAGGAAATAACAAATTTTCAAGTAAAGCCATGGCTGAAACCTT 53
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 AGTGGGTGGTCACGAGGACACATGGCTCCAGCAGGAAATAACAAATTTTCAAGTAAAGCCATGGCTGAAACCTT 518
Query 54 TTACCTTTCTAACATTGTGCCTCAGGATTTTGATAATAATTCTGGATATTGGAACAGAATAGAAATGTACTGTC 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TTACCTTTCTAACATTGTGCCTCAGGATTTTGATAATAATTCTGGATATTGGAACAGAATAGAAATGTACTGTC 592
Query 128 GAGAGCTGACAGAAAGGTTTGAAGATGTTTGGGTGGTATCTGGGCCTTTGACCTTACCTCAGACTAGAGGCGAT 201
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GAGAGCTGACAGAAAGGTTTGAAGATGTTTGGGTGGTATCTGGGCCTTTGACCTTACCTCAGACTAGAGGCGAT 666
Query 202 GGAAAGAAAATAGTTAGTTACCAG-------------------------------------------------- 225
||||||||||||||||||||||||
Sbjct 667 GGAAAGAAAATAGTTAGTTACCAGAGACTTAACTAAGCTTTTACTAGGTACCTGGTGCTGTTCTGGGTGCTTCT 740
Query 226 -------------------------------------------------------------------------- 225
Sbjct 741 GATACAGCATTAAACAAGGCAGAAAAGAGTACCCTCATGGAGCATGCATTATAGTGGAGGAGATACCTACTGAG 814
Query 226 -------------------------------------------------------------------------- 225
Sbjct 815 GTCATCCCTGTGCTTTCTCTGATGTTCCTGTTTCAAGAAGAGGTTGATTCCAGACAAGTGAAACATACCTGAAG 888
Query 226 -------------------------------------GTGATTGGCGAGGACAACGTGGCAGTCCCCTCACACC 262
|||||||||||||||||||||||||||||||||||||
Sbjct 889 ATTCTGGTTTGGACATTATAAATGGTCTGACAAGAAAGTGATTGGCGAGGACAACGTGGCAGTCCCCTCACACC 962
Query 263 TTTATAAGGTAATCCTGGCCCGCAGAAGCTCAGTATCTACCGAACCACTGGCGCTAGGGGCCTTTGTGGTACCC 336
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 TTTATAAGGTAATCCTGGCCCGCAGAAGCTCAGTATCTACCGAACCACTGGCGCTAGGGGCCTTTGTGGTACCC 1036
Query 337 AATGAAGCCATCGGCTTCCAGCCCCAGTTAACTGAATTCCAAGTGAGCCTCCAGGACCTAGAGAAGTTGTCAGG 410
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 AATGAAGCCATCGGCTTCCAGCCCCAGTTAACTGAATTCCAAGTGAGCCTCCAGGACCTAGAGAAGTTGTCAGG 1110
Query 411 ACTGGTGTTTTTTCCTCATTTGGATAGAACTAGTGATATCCGGAATATCTGCTCTGTGGACACCTGTAAGCTCC 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 ACTGGTGTTTTTTCCTCATTTGGATAGAACTAGTGATATCCGGAATATCTGCTCTGTGGACACCTGTAAGCTCC 1184
Query 485 TGGATTTCCAGGAGTTCACCTTGTACTTGAGTACAAGAAAGATTGAAGGAGCCCGATCAGTGCTCAGACTGGAA 558
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 TGGATTTCCAGGAGTTCACCTTGTACTTGAGTACAAGAAAGATTGAAGGAGCCCGATCAGTGCTCAGACTGGAA 1258
Query 559 AAGATCATGGAAAACTTGAAGAATGCAGAGATTGAACCAGATGATTACTTTATGAGTCGCTATGAGAAGAAGCT 632
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 AAGATCATGGAAAACTTGAAGAATGCAGAGATTGAACCAGATGATTACTTTATGAGTCGCTATGAGAAGAAGCT 1332
Query 633 AGAAGAACTCAAAGCTAAGGAGCAGTCAGGAACCCAGATAAGAAAGCCATCC---------------------- 684
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 AGAAGAACTCAAAGCTAAGGAGCAGTCAGGAACCCAGATAAGAAAGCCATCCTAGTTTTTATCTCAAGATGTGT 1406
Query 685 -------------------------------------------------------------------------- 684
Sbjct 1407 CATACCGTCTGTAATGAAGCAGGCATGCCCTCTTTAGGCTAACATATTTTAGTGGCTTTGCTTTTTGCTTTTTA 1480
Query 685 -------------------------------------------------------------------------- 684
Sbjct 1481 AAAAGTTTTTCTCTTTAAGAGATGTGGTCTCGCCGTGTCATCCAGGCTGGAGTGCAGTGGTGGAATCATAGCTC 1554
Query 685 -------------------------------------------------------------------------- 684
Sbjct 1555 ACTATAGCCTCAAACTTCTGGGCTTAAGCAATCCTCCTGCCTCTGCCCCCTGAGCAGCTGGGACTACAGGCACA 1628
Query 685 -------------------------------------------------------------------------- 684
Sbjct 1629 CACCATCACCCTCAGCTACTAGTGGCTTTGCTTTAAAGAAACAGTGGAATCCTAAATTTATGACTAAAAATTCC 1702
Query 685 -------------------------------------------------------------------------- 684
Sbjct 1703 CCCAAAAGATGAAAGATCTACAATGTTTTTGTCAGTATTATATTTGACTCAGGAACTAATTATTAAGGGAGCTT 1776
Query 685 -------------------------------------------------------------------------- 684
Sbjct 1777 TGACACCTGCAGATGGAGGGCTGATCTTGTGTCAAGTTAACAGGAAGACTGCCCACAGATGACACTGCATTTGT 1850
Query 685 -------------------------------------------------------------------------- 684
Sbjct 1851 ATCCCTGTGGATGTAGAGTATTGGGAAGGCATTTGTTTAGTTTCATGCCTCCAAACCATGCATTGTCTGTGATG 1924
Query 685 -------------------------------------------------------------------------- 684
Sbjct 1925 TATCTGCCCAGCCTTCTCAGAACTCAATGTTGTACATTTTTCCCTCTAGGACCTGAATTGGTCTTGGAGGCAGC 1998
Query 685 -------------------------------------------------------------------------- 684
Sbjct 1999 TTTTAGAAATCCTCTGTGTAGTTCCTGTCCACATGCACTATATATTTGTTTCTTTTTTCTCCTCTCATGAATCT 2072
Query 685 -------------------------------------------------------------------------- 684
Sbjct 2073 GCTCGTTTCTCTACTTCTGTCTACGTAGAAGCACTCAGCAACTAGTTTCTGCTCATTAAATGTGTTCTATATAC 2146
Query 685 ---- 684
Sbjct 2147 TAGG 2150
