Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_11437
• Subject: NM_203327.2
• Aligned Length: 1958
• Identities: 1263
• Gaps: 691

Alignment

Query    1  ATGATGGGTATTGGTAAGAATACCACATCCAAATCAATGGAGGCTGGAAGTTCAACAGAAGGCAAATACGAAGA  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGATGGGTATTGGTAAGAATACCACATCCAAATCAATGGAGGCTGGAAGTTCAACAGAAGGCAAATACGAAGA  74

Query   75  CGAGGCAAAGCACCCAGCTTTCTTCACTCTTCCGGTGGTGATAAATGGAGGCGCCACCTCCAGCGGTGAGCAGG  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  CGAGGCAAAGCACCCAGCTTTCTTCACTCTTCCGGTGGTGATAAATGGAGGCGCCACCTCCAGCGGTGAGCAGG  148

Query  149  ACAATGAGGACACTGAGCTCATGGCGATCTACACTACGGAAAACGGCATTGCAGAAAAGAGCTCTCTCGCTGAG  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  ACAATGAGGACACTGAGCTCATGGCGATCTACACTACGGAAAACGGCATTGCAGAAAAGAGCTCTCTCGCTGAG  222

Query  223  ACCCTGGATAGCACTGGCAGTCTGGACCCCCAGCGATCAGACATGATTTATACCATAGAAGATGTTCCTCCCTG  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  ACCCTGGATAGCACTGGCAGTCTGGACCCCCAGCGATCAGACATGATTTATACCATAGAAGATGTTCCTCCCTG  296

Query  297  GTACCTGTGTATATTTCTGGGGCTACAGCACTACCTGACATGCTTCAGCGGCACGATCGCAGTGCCCTTCCTGT  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GTACCTGTGTATATTTCTGGGGCTACAGCACTACCTGACATGCTTCAGCGGCACGATCGCAGTGCCCTTCCTGT  370

Query  371  TGGCCGATGCCATGTGTGTGGGGTACGACCAGTGGGCCACCAGCCAGCTCATTGGGACCATTTTCTTCTGTGTG  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  TGGCCGATGCCATGTGTGTGGGGTACGACCAGTGGGCCACCAGCCAGCTCATTGGGACCATTTTCTTCTGTGTG  444

Query  445  GGAATCACTACTTTGCTACAGACAACGTTTGGATGCAGGTTACCCCTGTTTCAGGCCAGTGCTTTTGCATTTTT  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GGAATCACTACTTTGCTACAGACAACGTTTGGATGCAGGTTACCCCTGTTTCAGGCCAGTGCTTTTGCATTTTT  518

Query  519  GGCCCCTGCTCGAGCCATCCTGTCTTTAGATAAATGGAAATGTAACACCACAGATGTTTCAGTTGCCAATGGAA  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  GGCCCCTGCTCGAGCCATCCTGTCTTTAGATAAATGGAAATGTAACACCACAGATGTTTCAGTTGCCAATGGAA  592

Query  593  CAGCAGAGCTGTTGCACACAGAACACATCTGGTATCCCCGGATCCGAGAGATCCAGGGGGCCATCATCATGTCC  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  CAGCAGAGCTGTTGCACACAGAACACATCTGGTATCCCCGGATCCGAGAGATCCAGGGGGCCATCATCATGTCC  666

Query  667  TCACTGATAGAAGTAGTCATCGGCCTCCTCGGCCTGCCTGGGGCTCTACTGAAGTACATCGGTCCCTTGACCAT  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  TCACTGATAGAAGTAGTCATCGGCCTCCTCGGCCTGCCTGGGGCTCTACTGAAGTACATCGGTCCCTTGACCAT  740

Query  741  TACACCCACGGTGGCCCTAATTGGCCTCTCTGGTTTCCAGGCAGCGGGGGAGAGAGCCGGGAAGCACTGGGGCA  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  TACACCCACGGTGGCCCTAATTGGCCTCTCTGGTTTCCAGGCAGCGGGGGAGAGAGCCGGGAAGCACTGGGGCA  814

Query  815  TTGCCATGCTGACAATATTCCTAGTATTACTGTTTTCTCAATACGCCAGAAATGTTAAATTTCCTCTCCCGATT  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  TTGCCATGCTGACAATATTCCTAGTATTACTGTTTTCTCAATACGCCAGAAATGTTAAATTTCCTCTCCCGATT  888

Query  889  TATAAATCCAAGAAAGGATGGACTGCGTACAAGTTACAGCTGTTCAAAATGTTCCCTATCATCCTGGCCATCCT  962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  TATAAATCCAAGAAAGGATGGACTGCGTACAAGTTACAGCTGTTCAAAATGTTCCCTATCATCCTGGCCATCCT  962

Query  963  GGTATCCTGGCTGCTCTGCTTCATCTTCACGGTGACAGACGTCTTCCCTCCCGACAGCACAAAGTATGGCTTCT  1036
            |||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||
Sbjct  963  GGTATCCTGGCTGCTCTGCTTCATCTTCACGGTGACAGATGTCTTCCCTCCCGACAGCACAAAGTATGGCTTCT  1036

Query 1037  ATGCTCGCACAGATGCCAGGCAAGGCGTGCTTCTGGTAGCCCCGTGGTTTAAGGTTCCATACCCATTTCAGTGG  1110
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  ATGCTCGCACAGATGCCAGGCAAGGCGTGCTTCTGGTAGCCCCGTGGTTTAAGGTTCCATACCCATTTCAGTGG  1110

Query 1111  GGACTGCCCACCGTGTCTGCGGCCGGTGTCATCGGCATGCTCAGTGCCGTGGTCGCCAGCATCATCGAGTCTAT  1184
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  GGACTGCCCACCGTGTCTGCGGCCGGTGTCATCGGCATGCTCAGTGCCGTGGTCGCCAGCATCATCGAGTCTAT  1184

Query 1185  TGGTGACTACTACGCCTGTGCACGGCTGTCCTGTGCCCCACCCCCCCCCATCCACGCAATAAACAGG------T  1252
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      |
Sbjct 1185  TGGTGACTACTACGCCTGTGCACGGCTGTCCTGTGCCCCACCCCCCCCCATCCACGCAATAAACAGGGGAATTT  1258

Query 1253  ACGT----------TCCTGAGAAGACAAGTTCC-----------------------------------------  1275
            .|||          |||||        .||||.                                         
Sbjct 1259  TCGTGGAAGGCCTCTCCTG--------TGTTCTTGATGGCATATTTGGTACTGGGAATGGCTCTACTTCATCCA  1324

Query 1276  --------------------------------------------------------------------------  1275
                                                                                      
Sbjct 1325  GTCCCAACATTGGAGTTTTGGGAATTACAAAGGTCGGCAGCCGCCGCGTGATACAGTGCGGAGCAGCCCTCATG  1398

Query 1276  --------------------------------------------------------------------------  1275
                                                                                      
Sbjct 1399  CTCGCTCTGGGCATGATCGGGAAGTTCAGCGCCCTCTTTGCGTCCCTTCCGGATCCTGTGCTGGGAGCCCTGTT  1472

Query 1276  --------------------------------------------------------------------------  1275
                                                                                      
Sbjct 1473  CTGCACGCTCTTTGGAATGATCACAGCTGTTGGCCTCTCTAACCTGCAGTTCATTGATTTAAATTCTTCCCGGA  1546

Query 1276  --------------------------------------------------------------------------  1275
                                                                                      
Sbjct 1547  ACCTCTTTGTGCTTGGATTTTCGATCTTCTTTGGGCTCGTCCTTCCAAGTTACCTCAGACAGAACCCTCTGGTC  1620

Query 1276  --------------------------------------------------------------------------  1275
                                                                                      
Sbjct 1621  ACAGGGATAACAGGAATCGATCAAGTGTTGAACGTCCTTCTCACAACTGCTATGTTTGTAGGGGGCTGTGTGGC  1694

Query 1276  --------------------------------------------------------------------------  1275
                                                                                      
Sbjct 1695  TTTTATCCTGGATAACACCATCCCAGGCACTCCAGAGGAAAGAGGAATCCGGAAATGGAAGAAGGGTGTGGGCA  1768

Query 1276  --------------------------------------------------------------------------  1275
                                                                                      
Sbjct 1769  AAGGGAACAAATCACTCGACGGCATGGAGTCGTACAATTTGCCATTTGGCATGAACATTATAAAAAAATACAGA  1842

Query 1276  --------------------------------------------------------------------------  1275
                                                                                      
Sbjct 1843  TGCTTCAGCTACTTACCCATCAGCCCAACCTTTGTGGGCTACACATGGAAAGGCCTCAGGAAGAGCGACAACAG  1916

Query 1276  ----------------------------------  1275
                                              
Sbjct 1917  CCGGAGTTCAGATGAAGACTCCCAGGCCACGGGA  1950