Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11448
- Subject:
- XR_001783699.1
- Aligned Length:
- 3138
- Identities:
- 841
- Gaps:
- 2157
Alignment
Query 1 --------------------------------------------------ATGGCCGTCACCGACAGCCTCA-- 22
|||||.|.|.||..|..|||||
Sbjct 1 CGGCACTCGCCCCGCCCCTTTGCTCTTCGGGGCGTGAGAAGCCGGCAAACATGGCGGCCCCCTGCTTCCTCACT 74
Query 23 --GCCG--GGCTGC---GACTGTCTTGGCAACTGTGTTGCTCTTGTCCTTCGGCAGCGTGGCCGCTAGTCATAT 89
||.| ||||.| |.|.|.|||||| |||||||||..||||||||...||||||.|.||.||
Sbjct 75 CTGCGGGTGGCTACCCTGGCCGCCTTGGC---------GCTCTTGTCTCTCGGCAGCTCTGCCGCTGGACACAT 139
Query 90 CGAGGATCAAGCAGAACAATTCTTTAGAAGTGGCCATACAAACAACTGGGCTGTTCTGGTGTGTACATCCCGAT 163
||||||||||||.|||||.||||||||||||||.||.|||||.||||||||||||.|||||||.||||||||||
Sbjct 140 CGAGGATCAAGCCGAACAGTTCTTTAGAAGTGGACACACAAATAACTGGGCTGTTTTGGTGTGCACATCCCGAT 213
Query 164 TCTGGTTTAATTATCGACATGTTGCAAATACCCTTTCTGTTTATAGAAGTGTCAAGAGGCTAGGTATTCCTGAC 237
||||||||||.||.|||||||||||||||||.|||||||||||||||||.|||||||||||||||||.||.|||
Sbjct 214 TCTGGTTTAACTACCGACATGTTGCAAATACTCTTTCTGTTTATAGAAGCGTCAAGAGGCTAGGTATCCCGGAC 287
Query 238 AGTCACATTGTCCTAATGCTTGCAGATGATATGGCCTGTAATCCTAGAAATCCCAAACCAGCTACAGTGTTTAG 311
||||||||||||||.||||||||.|||||.|||||.||.|||.||.|.||.|||||.|||||.||||||||.||
Sbjct 288 AGTCACATTGTCCTGATGCTTGCTGATGACATGGCGTGCAATGCTCGGAACCCCAAGCCAGCCACAGTGTTCAG 361
Query 312 TCACAAGAATATGGAACTAAATGTGTATGGAGATGATGTGGAAGTGGATTATAGAAGTTATGAGGTAACTGTGG 385
.||||||||.|||||.||.||||||||||||||.||||||||||||||.||.|||||.||||||||||||||||
Sbjct 362 CCACAAGAACATGGAGCTCAATGTGTATGGAGACGATGTGGAAGTGGACTACAGAAGCTATGAGGTAACTGTGG 435
Query 386 AGAATTTTTTACGGGTATTAACTGGGGGGATCCCACCTAGTACTCCTCGGTCAAAACGTCTTCTTTCTGATGAC 459
||||.||||||.|||||||.||.|||.||.|.|||||.|||||.|||||.|||||.|||||||||||.||.|||
Sbjct 436 AGAACTTTTTAAGGGTATTGACCGGGAGGGTTCCACCCAGTACCCCTCGCTCAAAGCGTCTTCTTTCCGACGAC 509
Query 460 AGAAGCAATATTCTAATTTATATGACAGGGCATGGTGGAAATGGTTTCTTAAAATTTCAAGATTCTGAAGAAAT 533
|||||||||||.||.||||||||||||||.|||||.||.|||||||||||.|||||.|||||||||||||||||
Sbjct 510 AGAAGCAATATCCTCATTTATATGACAGGTCATGGAGGGAATGGTTTCTTGAAATTCCAAGATTCTGAAGAAAT 583
Query 534 TACCAACATAGAACTCGCGGATGCTTTTGAACAAATGTGGCAGAAAAGACGCTACAATGAGCTACTGTTTATTA 607
.||||||||||||||.||.|||||.||||||||.|||||||||||.|||||||||||||||||.|||||.||||
Sbjct 584 CACCAACATAGAACTTGCAGATGCGTTTGAACAGATGTGGCAGAAGAGACGCTACAATGAGCTGCTGTTCATTA 657
Query 608 TTGATACTTGCCAAGGAGCATCCATGTATGAACGATTTTATTCTCCTAACATAATGGCTCTAGCTAGTAGTCAA 681
||||.||||||||.||.||.||||||||.||.||.||.||.|||||||||||.|||||..|.||||||||.||.
Sbjct 658 TTGACACTTGCCAGGGCGCGTCCATGTACGAGCGGTTCTACTCTCCTAACATCATGGCCTTGGCTAGTAGCCAG 731
Query 682 GTGGGAGAAGATTCACTCTCGCATCAACCTGATCCTGCAATTGGAGTCCATCTTATGGATAGATACACATTTTA 755
||||||||.|||||.||.|||||.||.|||||.|||||.||||||||.||||||||||||||.|||||.|||||
Sbjct 732 GTGGGAGAGGATTCGCTGTCGCACCAGCCTGACCCTGCGATTGGAGTTCATCTTATGGATAGGTACACGTTTTA 805
Query 756 TGTCTTGGAATTTTTGGAAGAAATTAACCCAGCTAGCCAAACTAATATGAATGACCTTTTTCAGGTATGTCCCA 829
|||||||||||||||||||||||||||.|||||||||||||||||.|||||.|||||||||||.||.|||||||
Sbjct 806 TGTCTTGGAATTTTTGGAAGAAATTAATCCAGCTAGCCAAACTAACATGAACGACCTTTTTCAAGTGTGTCCCA 879
Query 830 AAAGTCTGTGTGTGTCTACTCCTGGACATCGCACTGATCTTTTTCAGAGGGATCCTAAAAATGTACTGATAACT 903
|||||||.||||||||.||.|||||||||||||||||.|||||.|||.|.|||||.||||||||.|||||.||.
Sbjct 880 AAAGTCTCTGTGTGTCGACCCCTGGACATCGCACTGACCTTTTCCAGCGAGATCCAAAAAATGTCCTGATCACC 953
Query 904 GATTTCTTTGGAAGTGTACGGAAAGTGGAAATTACAACAGAGACTATTAAATTGCAACAGGATTCAGAAATCAT 977
||||||||.||||||||.||.||.||||||||.||||||||||..||.|..|||||...|||||||.||.||.|
Sbjct 954 GATTTCTTCGGAAGTGTGCGCAAGGTGGAAATCACAACAGAGAAGATCAGTTTGCAGTGGGATTCACAAGTCGT 1027
Query 978 GGAAAGCAGGTATTCATCT------------------------------------------------------- 996
|||.||||| .|||
Sbjct 1028 GGACAGCAG------TTCTAAAGAAGACGGCACGGCCGAGGAGCGCATGGGACCTCTCAAGTATGCTGAGCAGC 1095
Query 997 -------------------------------------------------------------------------- 996
Sbjct 1096 TCCCGGTGGCTCAGATAATACACCAGGATGTAATCTCAGCTACCGCTTAAGCACCACATCTGCCTGTGTGCTGC 1169
Query 997 -------------------------------------------------------------------------- 996
Sbjct 1170 CAGGCTCCCTGCCATGATCATCACGGACTAAACCTCTGAAACTGGGATTACAGCTAAGAGATTGCATGAATCTC 1243
Query 997 -------------------------------------------------------------------------- 996
Sbjct 1244 AGAAGAGACTTTGAACTTTGGACTTTTCAACACGGTTGAGACTGTGAGTGACTGCGGGGACTTCTAAAGTTGGA 1317
Query 997 -------------------------------------------------------------------------- 996
Sbjct 1318 CTAAATGTATTTTGTATTATTCTGCGCACCCAGTAGACTCATGTGTTCCAACAAGCCCATGGAGTGAGGGGATG 1391
Query 997 -------------------------------------------------------------------------- 996
Sbjct 1392 GAATATGGTGGTTTGAATATGCTTGGCCCATGGGAAGTGGCACGATTAGATGGCTGGGCCTTGTTGGAAGAAGT 1465
Query 997 -------------------------------------------------------------------------- 996
Sbjct 1466 CACTGTGTAGGAGGGGTTTGAAGGCTCCTCATGCTCAAGCGCCAGGCAGTGTGGAAGAGACAAATCCTCCTGGC 1539
Query 997 -------------------------------------------------------------------------- 996
Sbjct 1540 TGCCTGCAGATCAAGATGCAGAACTCTCGGCTCCCCCAGCACCACATCTGCTTCCCTGCTGCCTTGCTTCCCGC 1613
Query 997 -------------------------------------------------------------------------- 996
Sbjct 1614 CTTCACGGTGATGCACTGAAACTCTGAAACTGTGGCTCCAAGAGGCTGACAAAGGCTTAGACCTTCAACCACAT 1687
Query 997 -------------------------------------------------------------------------- 996
Sbjct 1688 TCCAAAGCAGGGGCCTTTTTCCTTATCCGCATGTTCCCAGGATGCCCCCTGAGAACCCTGCCTCAGCATCATTA 1761
Query 997 -------------------------------------------------------------------------- 996
Sbjct 1762 GTAATAAGACACCATTTGTACCATTTGATAGAGAGGCTCGTAAGACTTTGTCACATCTTCCCAGAAGAATGACG 1835
Query 997 -------------------------------------------------------------------------- 996
Sbjct 1836 CCAGGCTAATGACAAGAAAATATCAGATGTGTGGGAAATTCTACAAAGTGACTGAGCACCAAGAAGAGCTCTCC 1909
Query 997 -------------------------------------------------------------------------- 996
Sbjct 1910 AAAGGTGACAAGGTCATGAAAGGCGAGAGACCTGAAGAGGCTGAGGGCACGAGCTTCCTGACCGAGCTTGTCAC 1983
Query 997 -------------------------------------------------------------------------- 996
Sbjct 1984 AGCCCCTACAGATGAGGAGAGCATGAGCCCCACACTCTCGTGTTTCTGTCACGTGCAGCTGGATAACCTGGATG 2057
Query 997 -------------------------------------------------------------------------- 996
Sbjct 2058 GCTTGCTGCTCATCCCTGAGCCTCAGATTATCTACAAAGCAGGTACTAGATGCTCTGTCCCCTGGCCATTTGAG 2131
Query 997 -------------------------------------------------------------------------- 996
Sbjct 2132 AATGTTAGAAAATATCCACAAAAGGGCCCCAGGCGCGGGCGGTGGTGACACATAGAGATCCCTCTCTTCTCCCC 2205
Query 997 -------------------------------------------------------------------------- 996
Sbjct 2206 TGGCTGCTGGGGTGAGTGGACGAGGTAAACAATTTAGCATTCCTTCAGTGCTGTTTAGTGTCCAGGAAGAAGAC 2279
Query 997 -------------------------------------------------------------------------- 996
Sbjct 2280 CCTTCCAACCCTCTGGTGCTGGGGTCTGATGGAGGAGGTGCAGCCGTAGCCAGGGCAGCATTTATAAAGAACAG 2353
Query 997 -------------------------------------------------------------------------- 996
Sbjct 2354 AAGTGCCAGCTTTTGCAGGTGTTAGTATATTCCTTGCCGCTCTCTCACTAGGGCTACACCTTCATAAGGCTTTG 2427
Query 997 -------------------------------------------------------------------------- 996
Sbjct 2428 GGCTAGAGGGCCTGGGAAGGAACTGAATGAGAATGGGAAGAGGAGGAAGAGCCCTCCTTTAAAGGGGAGCCCAT 2501
Query 997 -------------------------------------------------------------------------- 996
Sbjct 2502 GTGCGTACCTCTGCTGTGTTAATGTACTGGGCAGTTCTTCCCAGACTAGTCTGACAGAGCCCAGGAAAAACACA 2575
Query 997 -------------------------------------------------------------------------- 996
Sbjct 2576 ACCCTCACTCACATCCCAGAGATCCCTGAGAGATCTGGGAACCAATGGTCACACCCATACCTTCTGCCTTTCCA 2649
Query 997 -------------------------------------------------------------------------- 996
Sbjct 2650 TCCCCAGGAAACACCAACCAGGGCTTTCCTGGGAGCAGAAACTCCTGGGAAGTTTCCCTGTGATGCCACAGCCT 2723
Query 997 -------------------------------------------------------------------------- 996
Sbjct 2724 AGAATACAGGAGGATGTGCGGCCACAGGAAGGGGGTCTGCAGGTGGAAATGGGAAGAATACAAAGTGGAGGACT 2797
Query 997 -------------------------------------------------------------------------- 996
Sbjct 2798 AGAAGAACTGAAGTGAGGCACTCTTTTAAGTGCCACTTAAAATTCCCCAGACTTCCTAAATAATAGCCTTGGGA 2871
Query 997 -------------------------------------------------------------------------- 996
Sbjct 2872 TCACACACCATAGAAACGCAACTGCTTTGTTCTGTCTTCCTGAAAGAATCGGAACTCTTTTTTTTTTCCCCTCC 2945
Query 997 -------------------------------------------------------------------------- 996
Sbjct 2946 AACAAAGGAATATCTACTGTTTTTACAGTTAATCAGCTGTAATGAAAGAATATGAAGAGCTGTCATGTGCTTAT 3019
Query 997 -------------------------------------------------------------------------- 996
Sbjct 3020 TAGAGAAAATTAGCAGATATTCTTTTATATGATGAAGTAACACACTGAGCTGATAACGCTATAGTGCACACTAA 3093
Query 997 ------------------------------ 996
Sbjct 3094 ATTACAATTAAAGGCCTTTCTGCTCTGCCA 3123
