Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_11482
Subject:
XM_011243707.2
Aligned Length:
1515
Identities:
1219
Gaps:
129

Alignment

Query    1  ATGGATGCTGATGAGGGTCAAGACATGTCCCAAGTTTCAGGGAAGGAAAGCCCCCCTGTAAGCGATACTCCAGA  74
            |||||||..||||||||||||||||||||||||||||||||.|||||.||||||||.||.||.||.||||||||
Sbjct    1  ATGGATGTCGATGAGGGTCAAGACATGTCCCAAGTTTCAGGAAAGGAGAGCCCCCCAGTCAGTGACACTCCAGA  74

Query   75  TGAGGGCGATGAGCCCATGCCGATCCCCGAGGACCTCTCCACCACCTCGGGAGGACAGCAAAGCTCCAAGAGTG  148
            |||.||.||||||||||||||..||||.||||||||.|||||.|||||.||||.||||||.|.|||||||||||
Sbjct   75  TGAAGGGGATGAGCCCATGCCTGTCCCTGAGGACCTGTCCACTACCTCTGGAGCACAGCAGAACTCCAAGAGTG  148

Query  149  ACAGAGTCGTGG------------------------------------------------------------CC  162
            |..|||.|.|||                                                            ||
Sbjct  149  ATCGAGGCATGGTTGCATATGGGGCTGATGGCTTTAGGGATTTTCATGCAATAATTCCCAAATCTTTCTCTCCC  222

Query  163  AGTAATGTTAAAGTAGAGACTCAGAGTGATGAAGAGAATGGGCGTGCCTGTGAAATGAATGGGGAAGAATGTGC  236
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  AGTAATGTTAAAGTAGAGACTCAGAGTGATGAAGAGAATGGGCGTGCCTGTGAAATGAATGGGGAAGAATGTGC  296

Query  237  GGAGGATTTACGAATGCTTGATGCCTCGGGAGAGAAAATGAATGGCTCCCACAGGGACCAAGGCAGCTCGGCTT  310
            .|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  AGAGGATTTACGAATGCTTGATGCCTCGGGAGAGAAAATGAATGGCTCCCACAGGGACCAAGGCAGCTCGGCTT  370

Query  311  TGTCGGGAGTTGGAGGCATTCGACTTCCTAACGGAAAACTAAAGTGTGATATCTGTGGGATCATTTGCATCGGG  384
            ||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||
Sbjct  371  TGTCAGGAGTTGGAGGCATTCGACTTCCTAACGGAAAACTAAAGTGTGATATCTGTGGGATCGTTTGCATCGGG  444

Query  385  CCCAATGTGCTCATGGTTCACAAAAGAAGCCACACTGGAGAACGGCCCTTCCAGTGCAATCAGTGCGGGGCCTC  458
            |||||||||||||||||||||||||||||.||.|||||.||||||||.|||||||||||.|||||.||||||||
Sbjct  445  CCCAATGTGCTCATGGTTCACAAAAGAAGTCATACTGGTGAACGGCCTTTCCAGTGCAACCAGTGTGGGGCCTC  518

Query  459  ATTCACCCAGAAGGGCAACCTGCTCCGGCACATCAAGCTGCATTCCGGGGAGAAGCCCTTCAAATGCCACCTCT  532
            .||.||||||||.||||||||.||.|||||||||||||||||.||.||.||||||||||||||||||||.||.|
Sbjct  519  CTTTACCCAGAAAGGCAACCTCCTGCGGCACATCAAGCTGCACTCGGGTGAGAAGCCCTTCAAATGCCATCTTT  592

Query  533  GCAACTACGCCTGCCGCCGGAGGGACGCCCTCACTGGCCACCTGAGGACGCACTCCGTCATTAAAGAAGAAACT  606
            |||||||.||||||||||||||||||||||||||.|||||||||||||||||||||||...|||         .
Sbjct  593  GCAACTATGCCTGCCGCCGGAGGGACGCCCTCACCGGCCACCTGAGGACGCACTCCGTTGGTAA---------G  657

Query  607  AATCACA---GTGAA----ATGGCAGAAGACCTGTGCAAGATAGGATCAGAG-AGATCTCTCGTGCTGGACAGA  672
            ..|||||   |||.|    .||||.|  ||.||       |||  |.|||.| ||.|||.|          |||
Sbjct  658  CCTCACAAATGTGGATATTGTGGCCG--GAGCT-------ATA--AACAGCGAAGCTCTTT----------AGA  710

Query  673  CTAGCAAGTAA----CGTCGCCA-AACGTA-----AGAGCTCTAT--GCCT--CAGAAATTT--CTTGGGGACA  730
            ..||||  |||    ||..|||| ||| ||     |.|||   ||  ||||  |.|..||.|  |..||.||||
Sbjct  711  GGAGCA--TAAAGAGCGATGCCACAAC-TACTTGGAAAGC---ATGGGCCTTCCGGGCATGTACCCAGGAGACA  778

Query  731  AGGGCCTGTCCGACACGCCCTACGACAGCAGCGCCAGCTACGAGAAGGAGAACGAAATGATGAAGTCCCACGTG  804
            ||.|||||||.||||.||||||.||   |||.||||.|||.|||||||||   ||.|||||||..|||||||||
Sbjct  779  AGTGCCTGTCAGACATGCCCTATGA---CAGTGCCAACTATGAGAAGGAG---GATATGATGACATCCCACGTG  846

Query  805  ATGGACCAAGCCATCAACAACGCCATCAACTACCTGGGGGCCGAGTCCCTGCGCCCGCTGGTGCAGACGCCCCC  878
            ||||||||.|||||||||||.||||||||||||||||||||.||||||||||||||..||||||||||.|||||
Sbjct  847  ATGGACCAGGCCATCAACAATGCCATCAACTACCTGGGGGCTGAGTCCCTGCGCCCATTGGTGCAGACACCCCC  920

Query  879  GGGCGGTTCCGAGGTGGTCCCGGTCATCAGCCCGATGTACCAGCTGCACAAGCCGCTCGCGGAGGGCACCCCGC  952
            .||..|.|||||||||||.||.|||||||||.|.||||||||||||||||||||.|.|.|.||.|||.||||.|
Sbjct  921  CGGTAGCTCCGAGGTGGTGCCAGTCATCAGCTCCATGTACCAGCTGCACAAGCCCCCCTCAGATGGCCCCCCAC  994

Query  953  GCTCCAACCACTCGGCCCAGGACAGCGCCGTGGAGAACCTGCTGCTGCTCTCCAAGGCCAAGTTGGTGCCCTCG  1026
            |.||||||||.||.||.|||||   |||||||||.|||.||||||||||.|||||||||||||..|||.|.|||
Sbjct  995  GGTCCAACCATTCAGCACAGGA---CGCCGTGGATAACTTGCTGCTGCTGTCCAAGGCCAAGTCTGTGTCATCG  1065

Query 1027  GAGCGCGAGGCGTCCCCGAGCAACAGCTGCCAAGACTCCACGGACACCGAGAGCAACAACGAGGAGCAGCGCAG  1100
            |||||.|||||.|||||||||||||||||||||||||||||.||.||.|||||||||...|||||.||||||||
Sbjct 1066  GAGCGAGAGGCCTCCCCGAGCAACAGCTGCCAAGACTCCACAGATACAGAGAGCAACGCGGAGGAACAGCGCAG  1139

Query 1101  CGGTCTCATCTACCTGACCAACCACATCGCCCCGCACGCGCGCAACGGGCTGTCGCTCAAGGAGGAGCACCGCG  1174
            |||.||.||||||||.||||||||||||..||||||.||.|||||.||||||.|.||||||||||||||.||||
Sbjct 1140  CGGCCTTATCTACCTAACCAACCACATCAACCCGCATGCACGCAATGGGCTGGCTCTCAAGGAGGAGCAGCGCG  1213

Query 1175  CCTACGACCTGCTGCGCGCCGCCTCCGAGAACTCGCAGGACGCGCTCCGCGTGGTCAGCACCAGCGGGGAGCAG  1248
            |||||||..|||||.|.||.|||||.||||||||||||||.||..||||.|||||||||||.||.||.||||||
Sbjct 1214  CCTACGAGGTGCTGAGGGCGGCCTCAGAGAACTCGCAGGATGCCTTCCGTGTGGTCAGCACGAGTGGCGAGCAG  1287

Query 1249  ATGAAGGTGTACAAGTGCGAACACTGCCGGGTGCTCTTCCTGGATCACGTCATGTACACCATCCACATGGGCTG  1322
            .||||||||||||||||||||||||||||.||||||||||||||||||||||||||.|||||.|||||||||||
Sbjct 1288  CTGAAGGTGTACAAGTGCGAACACTGCCGCGTGCTCTTCCTGGATCACGTCATGTATACCATTCACATGGGCTG  1361

Query 1323  CCACGGCTTCCGTGATCCTTTTGAGTGCAACATGTGCGGCTACCACAGCCAGGACCGGTACGAGTTCTCGTCGC  1396
            |||.|||||.||.|||||.||||||||.||||||||.||.||.||||||||||||.|||||||||||||.||.|
Sbjct 1362  CCATGGCTTTCGGGATCCCTTTGAGTGTAACATGTGTGGTTATCACAGCCAGGACAGGTACGAGTTCTCATCCC  1435

Query 1397  ACATAACGCGAGGGGAGCACCGCTTCCACATGAGC  1431
            |.||.|||||.||||||||.||.|.||||.|||||
Sbjct 1436  ATATCACGCGGGGGGAGCATCGTTACCACCTGAGC  1470

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