Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11509
- Subject:
- XM_006501195.3
- Aligned Length:
- 2905
- Identities:
- 1244
- Gaps:
- 1499
Alignment
Query 1 ATGCCCCGTGCCCCCCACTTCATGCCCTTGCTGCTACTGCTGCTGCTGCTCTCA---CTTCCCCATACTCAGGC 71
|||||||||||||||||||.|||||||.|||||||.|||||||||.||||.||| ||.|||||..|.|||||
Sbjct 1 ATGCCCCGTGCCCCCCACTCCATGCCCCTGCTGCTCCTGCTGCTGTTGCTGTCATCGCTCCCCCAAGCCCAGGC 74
Query 72 CGCCTTTCCCCAGGACCCCCTCCCTCTGTTGATCTCTGACCTTCAAGGTACTTCCCCATTATCCTGGTTTCGGG 145
.||||||||||||||||||..|||||||||||.||||||||||||||||.|.||.||||.|||||||||.||||
Sbjct 75 TGCCTTTCCCCAGGACCCCACCCCTCTGTTGACCTCTGACCTTCAAGGTGCCTCTCCATCATCCTGGTTCCGGG 148
Query 146 GCCTGGAGGATGATGCTGTGGCTGCAGAACTTGGGCTGGACTTTCAGAGATTCCTGACCTTGAACCGGACCTTG 219
||||||||||.||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 GCCTGGAGGACGATGCTGTGGCTGCGGAACTTGGGCTGGACTTTCAGAGATTCCTGACCTTGAACCGGACCTTG 222
Query 220 CTAGTGGCTGCCCGGGATCACGTTTTCTCCTTCGATCTTCAAGCCGAAGAAGAAGGGGAGGGGCTGGTGCCCAA 293
||.||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||
Sbjct 223 CTTGTGGCTGCCCGGGATCACGTTTTCTCCTTCGATCTTCAAGCCCAAGAAGAAGGGGAGGGGCTGGTGCCCAA 296
Query 294 CAAGTATCTAACATGGAGAAGCCAAGATGTGGAGAACTGTGCTGTACGGGGAAAGCTGACGGATGAGTGCTACA 367
|||||.|||.||||||||.||.||||||.|||||||||||||.||.|||||||||||||||||.||.|||||||
Sbjct 297 CAAGTTTCTGACATGGAGGAGTCAAGATATGGAGAACTGTGCAGTCCGGGGAAAGCTGACGGACGAATGCTACA 370
Query 368 ACTATATTCGTGTTCTTGTTCCCTGGGACTCCCAGACGCTCCTTGCCTGTGGAACGAACTCATTCAGCCCTGTG 441
||||.||.||||||||||||||||||.||||.|||||.||.||||||||||||||.||.||.|||||||||.||
Sbjct 371 ACTACATCCGTGTTCTTGTTCCCTGGAACTCGCAGACACTTCTTGCCTGTGGAACAAATTCCTTCAGCCCTATG 444
Query 442 TGCCGCAGCTATGGGATAACTTCGCTGCAGCAGGAGGGTGAGGAACTGAGTGGGCAGGCTCGATGCCCCTTTGA 515
||||||||||||||||||||.||.|||||.||||||||||||||.|||||||||||||||||||||||||||||
Sbjct 445 TGCCGCAGCTATGGGATAACATCTCTGCAACAGGAGGGTGAGGAGCTGAGTGGGCAGGCTCGATGCCCCTTTGA 518
Query 516 TGCCACCCAGTCCAACGTGGCCATCTTTGCAGAGGGCAGCCTGTACTCAGCCACAGCTGCGGATTTCCAGGCCA 589
||||||||||||||..|||||||||||||||||||||||..||||||||||||||||.||.|||||||||||||
Sbjct 519 TGCCACCCAGTCCACTGTGGCCATCTTTGCAGAGGGCAGTTTGTACTCAGCCACAGCAGCAGATTTCCAGGCCA 592
Query 590 GTGATGCTGTAGTTTACAGAAGCCTTGGGCCCCAGCCCCCACTCCGCTCCGCCAAGTATGACTCCAAGTGGCTC 663
||||||||||||||||||||||.|||||.||.|||||.||||||||.||.||.||||||||||||||||||||.
Sbjct 593 GTGATGCTGTAGTTTACAGAAGTCTTGGACCTCAGCCTCCACTCCGTTCTGCAAAGTATGACTCCAAGTGGCTT 666
Query 664 CGAGAGCCACACTTTGTCCAGGCCTTGGAGCATGGAGACCATGTCTACTTCTTCTTCCGCGAGGTCTCTGTGGA 737
||||||||||||||||||.|.||.||||||||||||||.||.|||||||||||||||||.||.|||||||||||
Sbjct 667 CGAGAGCCACACTTTGTCTATGCGTTGGAGCATGGAGAGCACGTCTACTTCTTCTTCCGAGAAGTCTCTGTGGA 740
Query 738 GGATGCTCGGCTGGGGAGGGTGCAGTTCTCCCGCGTAGCCCGAGTATGTAAACGTGACATGGGCGGCTCGCCTC 811
||||||.||..|.||||||||||||||.|||.|.||||||||.||||||||||||||||||||.|||||.||||
Sbjct 741 GGATGCCCGCTTAGGGAGGGTGCAGTTTTCCAGGGTAGCCCGGGTATGTAAACGTGACATGGGTGGCTCACCTC 814
Query 812 GGGCCTTGGACCGCCACTGGACATCCTTCCTGAAGCTTCGGCTCAACTGCTCTGTCCCTGGGGACTCTACTTTC 885
||||||||||.||||||||||||||||||||.|||||..|||||||||||||||||||||||||||||||.|||
Sbjct 815 GGGCCTTGGATCGCCACTGGACATCCTTCCTTAAGCTGAGGCTCAACTGCTCTGTCCCTGGGGACTCTACCTTC 888
Query 886 TATTTTGATGTTTTACAGGCCTTGACTGGGCCTGTGAACCTGCATGGCCGCTCTGCTCTCTTTGGGGTCTTCAC 959
||.|||||.||.||||||.||||.|||||||||||||||||||||||||||||.||||||||||||||||||||
Sbjct 889 TACTTTGACGTCTTACAGTCCTTAACTGGGCCTGTGAACCTGCATGGCCGCTCCGCTCTCTTTGGGGTCTTCAC 962
Query 960 CACCCAGACCAATAGCATCCCTGGCTCTGCCGTCTGCGCCTCCTACCTGGATGAGATTGAGCGTGGGTTTGAGG 1033
.||.||||||||||||||.|||||.|||||.||||||||||.||||||.|||||.|||||.|||||.|||||||
Sbjct 963 TACTCAGACCAATAGCATTCCTGGGTCTGCAGTCTGCGCCTTCTACCTAGATGATATTGAACGTGGCTTTGAGG 1036
Query 1034 GCAAGTTCAAGGAGCAGAGGAGTCTGGATGGGGCCTGGACTCCTGTGTCTGAGGACAGAGTTCCCTCACCCAGG 1107
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||..||.||||||||||||
Sbjct 1037 GCAAGTTCAAGGAGCAGAGGAGTCTGGATGGGGCCTGGACTCCTGTGTCTGAGGACAAGGTCCCCTCACCCAGG 1110
Query 1108 CCAGGATCCTGTGCAGGAGTAGGGGGAGCTGCCTTGTTCTCCTCTTCCCGAGACCTCCC-------------CT 1168
|||||.|||||||||||.||.||.|.||||||||.|||||||||.||.|.||||||.|| ||
Sbjct 1111 CCAGGGTCCTGTGCAGGTGTGGGTGCAGCTGCCTCGTTCTCCTCCTCTCAAGACCTACCTGATGATGTCCTGCT 1184
Query 1169 CGTC--------------------GGGCCCT------CCTCCCGCCA--------------------------- 1189
|.|| ||..||| ||.|||||||
Sbjct 1185 CTTCATCAAGGCACACCCGCTGCTGGATCCTGCTGTGCCACCCGCCACCCATCAACCGCTCCTCACTCTGACTA 1258
Query 1190 ----GGCC-----GTCCC---------------GAACGGCGG-----------------------CCGTTT--- 1213
|||| |.||| |||.|||.| |.||||
Sbjct 1259 GCAGGGCCCTGCTGACCCAGGTAGCTGTGGACGGAATGGCTGGTCCCCACAGAAATACTACTGTCCTGTTTCTT 1332
Query 1214 -----CAAC----------TTTTAAAGG---------GAGCGGCCCA---------------------CG---- 1238
|||| |..|.|||| .||.||..|| ||
Sbjct 1333 GGCTCCAACGATGGGACAGTGCTGAAGGTGCTACCTCCAGGGGGTCAGTCTTTGGGCTCTGAGCCTATCGTCTT 1406
Query 1239 -------------GCCTCCAGC-------------GTGGGGAGCG-----CCCGAGTCCT-CTCGGC------- 1273
||||.|||| |||||.|||| |||||| || |.||||
Sbjct 1407 GGAAGAGATTGATGCCTACAGCCATGCCCGGTGCAGTGGGAAGCGGTCACCCCGAG--CTGCGCGGCGGATCAT 1478
Query 1274 ----CACGAGCTGGACGCT------------CTT-------------CAGGACGTTTC----ACCGCCCCCTC- 1313
|..|||||||||.|| ||| |.|||.||.|| |||.|.|.|||
Sbjct 1479 AGGGCTGGAGCTGGACACTGAGGGTCACAGGCTTTTTGTGGCCTTTCCTGGATGTATCGTCTACCTCTCTCTCA 1552
Query 1314 --------GCCCCGCA------------------CCTCCAGCCTTCCC--GAC-----------------TCG- 1341
||||.||| |..||.|.||||.| ||| |||
Sbjct 1553 GCCGGTGTGCCCGGCATGGAGCATGTCAGAGGAGCTGCCTGGCTTCTCTGGACCCATACTGTGGATGGCATCGA 1626
Query 1342 --CAGAGTCTCC--------CGAGGCCCCTTTTCGCCTCGGGTTTATTTATTGACTGTCTTTCCCCCTG---TC 1402
|||||.||.| |..||..|||..| ||| |.||| ||||..||...||| .|
Sbjct 1627 TCCAGAGGCTGCATGAGTATCAGGGGACCTGGT------GGG-------ACTGA-TGTCGATCTGACTGGGAAC 1686
Query 1403 C-----TCGACAGA--AGAGTG-----------GGAGG------------------------------------ 1422
| ||.||||| |..||| ||||.
Sbjct 1687 CAGGAATCCACAGAGCACGGTGACTGCCAAGATGGAGCGACCGGGAGTCAGTCTGGCCCTGGAGATTCTGCTTA 1760
Query 1423 -------------------------------------------------------------------------- 1422
Sbjct 1761 TGTGCTTCTGGGTCCTGGCCCTTCCCCTGAGACCCCCAGTTCCCCCAGTGATGCCCAACAAGGGCCCCAGTCTT 1834
Query 1423 -------------------------------------------------------------------------- 1422
Sbjct 1835 CCACTCTTGGAGCTCACACACAGGGCGTGCGCAGGGACCTTTCCCCAGCCTCAGCCTCCCGATCCATTCCCATC 1908
Query 1423 -------------------------------------------------------------------------- 1422
Sbjct 1909 CCACTCCTCCTGGCCTGTGTGGCCGCGGCCTTCGCTTTGGGCGCCTCAGTCTCCGGTCTCTTGGTGTCCTGTGC 1982
Query 1423 -------------------------------------------------------------------------- 1422
Sbjct 1983 TTGTCGTCGCGCGAACCGCCGTCGGAGCAAGGACATCGAGACCCCGGGGCTGCCGCGCCCCCTCTCCCTTCGCA 2056
Query 1423 -------------------------------------------------------------------------- 1422
Sbjct 2057 GCCTGGCCCGGCTGCACGGTGGCGGTCCTGAGCCCCCGCCTCCGCCCAAGGATGGAGATGCAGCGCAAACGCCC 2130
Query 1423 -------------------------------------------------------------------------- 1422
Sbjct 2131 CAGCTCTACACTACCTTCCTGCCTCCGCCCGACGGCGGATCCCCACCGGAGCTGGCCTGCCTACCCACGCCGGA 2204
Query 1423 -------------------------------------------------------------------------- 1422
Sbjct 2205 GACGACGCCCGAGCTGCCCGTGAAGCACCTCCGTGCCTCCGGGGGCCCCTGGGAATGGAACCAGAATGGGAACA 2278
Query 1423 -------------------------------------------------------------------------- 1422
Sbjct 2279 ACGCCTCGGAGGGCCCAGGCCGCCCACCACGGGGCTGCAGCGGGGCGGGCGGGCCCGCACCGCGAGTGCTGGTG 2352
Query 1423 -------------------------------------------------------------------------- 1422
Sbjct 2353 AGGCCACCGCCCCCTGGCTGCCCCGGGCAGGCGGTAGAGGTGACCACGCTGGAGGAACTGCTGCGCTACCTGCA 2426
Query 1423 -------------------------------------------------------------------------- 1422
Sbjct 2427 CGGCCCTCAGCCGCCCAGGAAGGGTAGCGAACCTCTCGCCTCCGCCCCGTTCACCTCCCGGCCGCCCGCCTCGG 2500
Query 1423 -------------------------------------------------------------------------- 1422
Sbjct 2501 AGCCCGGCGCCTCGCTGTTCGTGGACTCCAGCCCGATGCCGCGGGATGGCGTTCCGCCGCTCAGGCTCGACGTG 2574
Query 1423 -------------------------------------------------------------------------- 1422
Sbjct 2575 CCACCCGAAGGCAAGCGCGCTGCCCCGAGCGGGCGGCCTGCTCTCTCGGCCCCAGCCCCGCGCCTGGGTGTCGG 2648
Query 1423 -------------------------------------------------------------------------- 1422
Sbjct 2649 CGGCAGCCGCCGATTGCCCTTTCCCACACACCGGGCGCCCCCGGGCCTGCTCACGCGAGTGCCCTCGGGAGGCC 2722
Query 1423 -------------------------------------------------------------------------- 1422
Sbjct 2723 CGGCCAGGTACTCCGGGGGGCCCGGGAGGCACCTCCTGTACCTGGGCCGGCCCGAAGGCCATCGCGGCCGCTCC 2796
Query 1423 -------------------------------------------------------------------------- 1422
Sbjct 2797 CTGAAGAGGGTGGACGTGAAGTCTCCGCTGTCGCCCAAGCCGCCCCTCGCCTCCCCGCCGCAGCCCGCCCCGCA 2870
Query 1423 ------------------- 1422
Sbjct 2871 CGGTGGTCATTTCAACTTC 2889
