Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11534
- Subject:
- XR_377421.3
- Aligned Length:
- 2074
- Identities:
- 267
- Gaps:
- 1777
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TCCGAAACCCACTCTAATTGAGGCGCTGGGATTCCTCACGTGAGACGTTGATTTGTAGTTTGAACACGTGGCTC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ATTCAAAAAGCCGGACACTCGGAGCGGCTGCCCCCGCCCCGCTCCCCTCGCCGCTGCCAGTCACCCCTCGGGGT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TTTTTTTTTTTACGGGGAGGCGGCGCCTGCCCCACGTAGTGTGATATTTTCACAGCCCGCTGGCCGCTGCCAAA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGGGTTGGGGAGGAAGAGACAAAAAGTAGTTTCCCCCCGCGCCTCCTCCTTTCTCTCGCTAATCCCGCCTCCTC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCCAGAGTTAGGAAGACTCGACGCTGGGCTCGTCGCTAGGCTTTTTCTTTCTCTCTTTTTTTTAATACCCAGAA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GAGGAAAAAGGACCCTGGGATCTGGTTTTCGCCCGCCGCTCCCGTGCTTGGGTCACTGTGTGGGTTTGAAAGCC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AAGAGGAGAGGAACAAAATCCACCGGCTCCATCCTCCGCCGTGGGTGCTTTTTTTAATTTAGCATTTTCCTCGG 518
Query 1 ------------------------ATGAACAAACTGTATATCGGAAACCTCAGCGAGAACGCCGCCCCCTCGGA 50
|||||||||.||||.|||||.|||||||||||..||||||.||||.||||
Sbjct 519 GTTTTAAAACGACCCCTTTTCACAATGAACAAATTGTACATCGGGAACCTCAGCGACCACGCCGGCCCCGCGGA 592
Query 51 CCTAGAAAGTATCTTCAAGGACGCCAAGATCCCGGTGTCGGGACCCTTCCTGGTGAAGACTGGCTACGCGTTCG 124
|||.||||||.|||||||||||||.||||||||||||.||||.|||||||||||||||||.|||||||||||||
Sbjct 593 CCTGGAAAGTGTCTTCAAGGACGCTAAGATCCCGGTGGCGGGCCCCTTCCTGGTGAAGACGGGCTACGCGTTCG 666
Query 125 TGGACTGCCCGGACGAGAGCTGGGCCCTCAAGGCCATCGAGGCGCTTTCAGGTAAAATAGAACTGCACGGGAAA 198
|||||||||||||||||.||||||||||||||||||||||||||||||||||||||||.|||||.||.||||||
Sbjct 667 TGGACTGCCCGGACGAGGGCTGGGCCCTCAAGGCCATCGAGGCGCTTTCAGGTAAAATGGAACTACATGGGAAA 740
Query 199 CCCATAGAAGTTGAGCACTCGGTCCCAAAAAGGCAAAGGATTCGGAAACTTCAGATACGAAATATCCCGCCTCA 272
||.||.||||||||||||||||||||.|||.||||.||||||||.||||||||||||||||||||||||||.||
Sbjct 741 CCGATGGAAGTTGAGCACTCGGTCCCTAAACGGCAGAGGATTCGTAAACTTCAGATACGAAATATCCCGCCCCA 814
Query 273 TTTACAGTGGGAGGAAATG--GGGCAGCCT-------------------------------------------- 300
.|||||.||||||| || ||..||..|
Sbjct 815 CTTACAATGGGAGG---TGCTGGATAGTTTACTAGTCCAGTATGGAGTGGTGGAGAGCTGTGAGCAAGTGAACA 885
Query 301 -------------------------------------------------------------------------- 300
Sbjct 886 CGGATTCGGAAACGGCAGTTGTAAATGTAACCTATTCCAGTAAGGACCAAGCTAGACAAGCCTTAGACAAACTG 959
Query 301 -------------------------------------------------------------------------- 300
Sbjct 960 AATGGATTCCAGTTAGAGAACTTCACCTTGAAGGTTGCCTACATCCCAGATGAAACTGCTGCCCAGCAAAATCC 1033
Query 301 -------------------------------------------------------------------------- 300
Sbjct 1034 CTCGCCACAGCTCCGGGGGCGCCGGGGGCCAGGGCAGCGGGGCTCATCCAGGCAGGCGTCTCCAGGATCGGTGT 1107
Query 301 -------------------------------------------------------------------------- 300
Sbjct 1108 CCAAGCAGAAACCCTGTGACCTGCCACTGCGCCTGCTGGTTCCCACCCAGTTTGTTGGAGCCATTATAGGAAAA 1181
Query 301 -------------------------------------------------------------------------- 300
Sbjct 1182 GAAGGTGCTACCATTCGCAACATCACAAAGCAGACCCAGTCTAAAATCGATGTCCATCGTAAGGAGAATACAGG 1255
Query 301 -------------------------------------------------------------------------- 300
Sbjct 1256 GGCCGCGGAGAAGTCCATTACTATCCTCTCTACCCCTGAAGGCACCTCTGCAGCTTGTAAGTCTATTCTGGAGA 1329
Query 301 -------------------------------------------------------------------------- 300
Sbjct 1330 TTATGCATAAGGAAGCTCAAGATATAAAATTCACAGAGGAGATTCCCTTGAAGATCTTAGCTCACAATAACTTT 1403
Query 301 -------------------------------------------------------------------------- 300
Sbjct 1404 GTAGGCCGTCTCATTGGTAAAGAAGGAAGAAACCTTAAAAAAATCGAGCAAGACACGGACACTAAAATCACAAT 1477
Query 301 -------------------------------------------------------------------------- 300
Sbjct 1478 ATCTCCATTGCAGGAACTGACGCTGTACAATCCGGAACGCACCATTACAGTGAAAGGCAGTGTTGAGACGTGTG 1551
Query 301 -------------------------------------------------------------------------- 300
Sbjct 1552 CCAAGGCGGAGGAGGAAATAATGAAGAAGATCAGGGAGTCTTATGAAAATGATATTGCTTCCATGAATCTTCAA 1625
Query 301 -------------------------------------------------------------------------- 300
Sbjct 1626 GCACATTTAATCCCTGGATTAAATCTGAATGCCTTGGGTCTGTTCCCACCCACGTCAGGGATGCCACCTCCCAC 1699
Query 301 -------------------------------------------------------------------------- 300
Sbjct 1700 CTCAGGGCCCCCTTCAACCCTGACTCCTCCCTACCCACAATTTGAGCAATCAGAGACGGAGACTGTGCATCTGT 1773
Query 301 -------------------------------------------------------------------------- 300
Sbjct 1774 TTATTCCCGCCCTGTCCGTTGGCGCCATCATTGGCAAGCAGGGCCAACACATCAAACAGCTTTCTCGCTTTGCG 1847
Query 301 -------------------------------------------------------------------------- 300
Sbjct 1848 GGAGCTTCGATTAAGAAGGCATTTAATTCTGCAGCTCAGTCAATCATGTGCAGATGTCAGGCTGGTTTGCCTAA 1921
Query 301 -------------------------------------------------------------------------- 300
Sbjct 1922 GGTTTGTCAGTGACACCCGAAAGTATCATAACTGGCTGGTGATGGGTCTATTACAGATCGCTCCAGCCGAAGCA 1995
Query 301 -------------------------------------------------------------------------- 300
Sbjct 1996 CCAGATGCTAAAGTGCGGATGGTGATTATCACTGGACCACCAGAGGCTCAGTTCAAGGCTCAGGGAAGAATTTA 2069
Query 301 -- 300
Sbjct 2070 TG 2071
