Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11556
- Subject:
- NR_072979.2
- Aligned Length:
- 2813
- Identities:
- 1515
- Gaps:
- 1298
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ACAGGTCCCACCTCCTGGCTCCCAGGACGGGTCTGCACCAACCTCAGTTTCGGGGCTGCGGCTCACAGAAGTCT 74
Query 1 ------------------------------------------------------------ATGAAGATTGCAGT 14
||||||||||||||
Sbjct 75 AACCTGCCCGGGACGCCCGCACCAACTCCTGCGCGCGGTCCTTCCAACCCTCCTGCTACCATGAAGATTGCAGT 148
Query 15 GATTGGACAGAGCCTGTTTGGCCAGGAAGTTTACTGCCACCTGAGGAAGGAGGGCCACGAAGTGGTGGGTGTGT 88
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 GATTGGACAGAGCCTGTTTGGCCAGGAAGTTTACTGCCACCTGAGGAAGGAGGGCCACGAAGTGGTGGGTGTGT 222
Query 89 TCACTGTTCCAGACAAGGATGGAAAGGCCGACCCCCTGGGTCTGGAAGCTGAGAAGGATGGAGTGCCGGTATTC 162
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 TCACTGTTCCAGACAAGGATGGAAAGGCCGACCCCCTGGGTCTGGAAGCTGAGAAGGATGGAGTGCCGGTATTC 296
Query 163 AAGTACTCCCGGTGGCGTGCAAAAGGACAGGCTTTGCCTGATGTGGTGGCAAAATACCAGGCTTTGGGGGCCGA 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 AAGTACTCCCGGTGGCGTGCAAAAGGACAGGCTTTGCCTGATGTGGTGGCAAAATACCAGGCTTTGGGGGCCGA 370
Query 237 GCTCAACGTCCTGCCCTTCTGCAGCCAATTCATCCCCATGGAGATAATCAGTGCCCCCCGGCATGGCTCCATCA 310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GCTCAACGTCCTGCCCTTCTGCAGCCAATTCATCCCCATGGAGATAATCAGTGCCCCCCGGCATGGCTCCATCA 444
Query 311 TCTATCACCCGTCACTGCTCCCTAGGCACCGAGGGGCCTCGGCCATCAACTGGACCCTCATTCACGGAGATAAG 384
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 TCTATCACCCGTCACTGCTCCCTAGGCACCGAGGGGCCTCGGCCATCAACTGGACCCTCATTCACGGAGATAAG 518
Query 385 AAAGGGGGGTTTTCCATCTTCTGGGCGGATGATGGTCTGGACACCGGAGACCTGCTGCTGCAGAAGGAGTGTGA 458
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 AAAGGGGGGTTTTCCATCTTCTGGGCGGATGATGGTCTGGACACCGGAGACCTGCTGCTGCAGAAGGAGTGTGA 592
Query 459 GGTGCTCCCGGACGACACCGTGAGCACGCTGTACAACCGCTTCCTCTTCCCTGAAGGCATCAAAGGGATGGTGC 532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GGTGCTCCCGGACGACACCGTGAGCACGCTGTACAACCGCTTCCTCTTCCCTGAAGGCATCAAAGGGATGGTGC 666
Query 533 AGGCCGTGAGGCTGATCGCTGAGGGCAAAGCCCCCAGACTCCCTCAGCCTGAGGAAGGAGCCACCTATGAGGGG 606
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 AGGCCGTGAGGCTGATCGCTGAGGGCAAAGCCCCCAGACTCCCTCAGCCTGAGGAAGGAGCCACCTATGAGGGG 740
Query 607 ATTCAGAAGAAGGAGACAGCCAAGATCAACTGGGACCAGCCGGCAGAGGCCATTCACAACTGGATCCGCGGGAA 680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 ATTCAGAAGAAGGAGACAGCCAAGATCAACTGGGACCAGCCGGCAGAGGCCATTCACAACTGGATCCGCGGGAA 814
Query 681 CGACAAGGTGCCGGGAGCCTGGACAGAGGCCTGTGAACAGAAACTGACATTTTTCAACTCAACGCTGAACACTT 754
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CGACAAGGTGCCGGGAGCCTGGACAGAGGCCTGTGAACAGAAACTGACATTTTTCAACTCAACGCTGAACACTT 888
Query 755 CAGGCCTGGTGCCCGAGGGAGACGCTTTGCCCATCCCAGGAGCCCATCGGCCAGGGGTGGTCACCAAAGCAGGA 828
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 CAGGCCTGGTGCCCGAGGGAGACGCTTTGCCCATCCCAGGAGCCCATCGGCCAGGGGTGGTCACCAAAGCAGGA 962
Query 829 CTCATCCTCTTTGGGAATGATGACAAAATGCTGCTGGTGAAGAATATTCAGCTGGAGGATGGCAAAATGATCCT 902
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 CTCATCCTCTTTGGGAATGATGACAAAATGCTGCTGGTGAAGAATATTCAGCTGGAGGATGGCAAAATGATCCT 1036
Query 903 GGCCTCGAACTTCTTTAAGGGGGCAGCCAGCAGTGTCCTTGAGCTGACAGAGGCAGAGCTGGTTACTGCGGAGG 976
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 GGCCTCGAACTTCTTTAAGGGGGCAGCCAGCAGTGTCCTTGAGCTGACAGAGGCAGAGCTGGTTACTGCGGAGG 1110
Query 977 CTGTGCGGAGTGTTTGGCAGCGGATCCTCCCCAAAGTCCTGGAGGTTGAAGACTCCACTGATTTCTTCAAGTCA 1050
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 CTGTGCGGAGTGTTTGGCAGCGGATCCTCCCCAAAGTCCTGGAGGTTGAAGACTCCACTGATTTCTTCAAGTCA 1184
Query 1051 GGGGCCGCGTCTGTGGACGTTGTGAGGCTGGTGGAGGAAGTGAAGGAGCTGTGTGATGGCCTGGAGTTAGAAAA 1124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 GGGGCCGCGTCTGTGGACGTTGTGAGGCTGGTGGAGGAAGTGAAGGAGCTGTGTGATGGCCTGGAGTTAGAAAA 1258
Query 1125 TGAAGATGTGTACATGGCATCCACCTTTGGGGACTTCATCCAGCTGTTAGTGAGGAAGCTGCGAGGGGACGATG 1198
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 TGAAGATGTGTACATGGCATCCACCTTTGGGGACTTCATCCAGCTGTTAGTGAGGAAGCTGCGAGGGGACGATG 1332
Query 1199 AGGAGGGCGAGTGCAGCATTGACTACGTGGAAATGGCAGTGAACAAGCGCACTGTCCGCATGCCCCACCAGCTC 1272
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 AGGAGGGCGAGTGCAGCATTGACTACGTGGAAATGGCAGTGAACAAGCGCACTGTCCGCATGCCCCACCAGCTC 1406
Query 1273 TTCATTGGGGGGGAGTTCGTGGATGCCGAGGGCGCCAAGACCTCTGAGACCATCAATCCCACCGATGGAAGTGT 1346
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 TTCATTGGGGGGGAGTTCGTGGATGCCGAGGGCGCCAAGACCTCTGAGACCATCAATCCCACCGATGGAAGTGT 1480
Query 1347 CATCTGCCAGGTATCCCTGGCCCAAGTCACCGACGTCGACAAGGCAGTGGCCGCAGCCAAGGATGCCTTTGAGA 1420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 CATCTGCCAGGTATCCCTGGCCCAAGTCACCGACGTCGACAAGGCAGTGGCCGCAGCCAAGGATGCCTTTGAGA 1554
Query 1421 ATGGACGGTGGGGGAAGATCAGTGCGCGGGACCGGGGCCGGCTGATGTACAGGGCTCCACCATCCCCATCAACC 1494
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 ATGGACGGTGGGGGAAGATCAGTGCGCGGGACCGGGGCCGGCTGATGTACAGGGCTCCACCATCCCCATCAACC 1628
Query 1495 AGGCCAGACCCAACCGCAACC----------------------------------------------------- 1515
|||||||||||||||||||||
Sbjct 1629 AGGCCAGACCCAACCGCAACCTGACCTTGACCAGGAAGGAGCCTGTTGGGGTTTGTGGCATCATCATCCCCTGG 1702
Query 1516 -------------------------------------------------------------------------- 1515
Sbjct 1703 AACTATCCCCTGATGATGCTGTCCTGGAAGACAGCTGCCTGCCTGGCTGCCGGGAACACAGTGGTGATCAAGCC 1776
Query 1516 -------------------------------------------------------------------------- 1515
Sbjct 1777 TGCTCAGGTGACCCCACTCACAGCCTTGAAGTTTGCAGAGCTGACATTAAAGGCCGGCATTCCCAAAGGTGTGG 1850
Query 1516 -------------------------------------------------------------------------- 1515
Sbjct 1851 TTAACGTCCTCCCAGGATCTGGCTCCCTGGTCGGCCAGAGACTCTCAGACCATCCTGATGTGAGGAAAATCGGG 1924
Query 1516 -------------------------------------------------------------------------- 1515
Sbjct 1925 TTCACAGGCTCCACAGAGGTGGGCAAGCACATCATGAAAAGGGGATGAGTTCTGTTTTCTTCAACAAAGGAGAG 1998
Query 1516 -------------------------------------------------------------------------- 1515
Sbjct 1999 AATTGCATTGCAGCAGGCCGACTCTTTGTGGAGGACTCCATTCATGATGAGTTCGTGCGGAGAGTGGTAGAAGA 2072
Query 1516 -------------------------------------------------------------------------- 1515
Sbjct 2073 GGTGCGGAAGATGAAGGTGGGCAACCCGCTGGACAGGGACACCGACCACGGGCCGCAGAATCACCATGCCCACC 2146
Query 1516 -------------------------------------------------------------------------- 1515
Sbjct 2147 TTGTGAAGCTGATGGAGTACTGCCAGCATGGCGTGAAGGAAGGGGCCACACTGGTCTGCGGCGGGAATCAGGTC 2220
Query 1516 -------------------------------------------------------------------------- 1515
Sbjct 2221 CCTCGGCCAGGGTTCTTCTTTGAGCCAACTGTTTTCACAGACGTGGAAGACCACATGTTCATAGCCAAGGAGGA 2294
Query 1516 -------------------------------------------------------------------------- 1515
Sbjct 2295 GTCCTTCGGGCCTGTCATGATCATCTCTCGGTTTGCTGATGGGGACTTGGATGCCGTGCTGTCTCGGGCCAATG 2368
Query 1516 -------------------------------------------------------------------------- 1515
Sbjct 2369 CCACGGAATTTGGCCTGGCTTCTGGTGTCTTCACCAGGGACATCAACAAGGCCCTGTATGTCAGTGACAAGCTC 2442
Query 1516 -------------------------------------------------------------------------- 1515
Sbjct 2443 CAGGCAGGCACTGTGTTTGTCAACACGTACAACAAGACCGACGTGGCCGCTCCCTTCGGAGGATTCAAACAGTC 2516
Query 1516 -------------------------------------------------------------------------- 1515
Sbjct 2517 TGGATTTGGCAAAGATCTAGGAGAGGCGGCTCTGAACGAGTACCTGCGGGTCAAGACAGTGACCTTCGAATACT 2590
Query 1516 -------------------------------------------------------------------------- 1515
Sbjct 2591 GAAGAAAGGTCTTTGTGAGAAGAAAGTCCCTGCCCCTCCCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGG 2664
Query 1516 -------------------------------------------------------------------------- 1515
Sbjct 2665 TGCACAGCACCTCCCACCTGGGGGGCTAGTGGAAGCCCTCCTGCCTGCACACCATGTCTGCATCTTGGACGCCC 2738
Query 1516 -------------------------------------------------------------------------- 1515
Sbjct 2739 TCTGTCCAGTCAGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGAGAG 2812
Query 1516 - 1515
Sbjct 2813 A 2813
