Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11556
- Subject:
- XM_017005614.2
- Aligned Length:
- 2484
- Identities:
- 1506
- Gaps:
- 969
Alignment
Query 1 ATGAAGATTGCAGTGATTGGACAGAGCCTGTTTGGCCAGGAAGTTTACTGCCACCTGAGGAAGGAGGGCCACGA 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGAAGATTGCAGTGATTGGACAGAGCCTGTTTGGCCAGGAAGTTTACTGCCACCTGAGGAAGGAGGGCCACGA 74
Query 75 AGTGGTGGGTGTGTTCACTGTTCCAGACAAGGATGGAAAGGCCGACCCCCTGGGTCTGGAAGCTGAGAAGGATG 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 AGTGGTGGGTGTGTTCACTGTTCCAGACAAGGATGGAAAGGCCGACCCCCTGGGTCTGGAAGCTGAGAAGGATG 148
Query 149 GAGTGCCGGTATTCAAGTACTCCCGGTGGCGTGCAAAAGGACAGGCTTTGCCTGATGTGGTGGCAAAATACCAG 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 GAGTGCCGGTATTCAAGTACTCCCGGTGGCGTGCAAAAGGACAGGCTTTGCCTGATGTGGTGGCAAAATACCAG 222
Query 223 GCTTTGGGGGCCGAGCTCAACGTCCTGCCCTTCTGCAGCCAATTCATCCCCATGGAGATAATCAGTGCCCCCCG 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GCTTTGGGGGCCGAGCTCAACGTCCTGCCCTTCTGCAGCCAATTCATCCCCATGGAGATAATCAGTGCCCCCCG 296
Query 297 GCATGGCTCCATCATCTATCACCCGTCACTGCTCCCTAGGCACCGAGGGGCCTCGGCCATCAACTGGACCCTCA 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GCATGGCTCCATCATCTATCACCCGTCACTGCTCCCTAGGCACCGAGGGGCCTCGGCCATCAACTGGACCCTCA 370
Query 371 TTCACGGAGATAAGAAAGGGGGGTTTTCCATCTTCTGGGCGGATGATGGTCTGGACACCGGAGACCTGCTGCTG 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TTCACGGAGATAAGAAAGGGGGGTTTTCCATCTTCTGGGCGGATGATGGTCTGGACACCGGAGACCTGCTGCTG 444
Query 445 CAGAAGGAGTGTGAGGTGCTCCCGGACGACACCGTGAGCACGCTGTACAACCGCTTCCTCTTCCCTGAAGGCAT 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CAGAAGGAGTGTGAGGTGCTCCCGGACGACACCGTGAGCACGCTGTACAACCGCTTCCTCTTCCCTGAAGGCAT 518
Query 519 CAAAGGGATGGTGCAGGCCGTGAGGCTGATCGCTGAGGGCAAAGCCCCCAGACTCCCTCAGCCTGAGGAAGGAG 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CAAAGGGATGGTGCAGGCCGTGAGGCTGATCGCTGAGGGCAAAGCCCCCAGACTCCCTCAGCCTGAGGAAGGAG 592
Query 593 CCACCTATGAGGGGATTCAGAAGAAGGAGACAGCCAAGATCAACTGGGACCAGCCGGCAGAGGCCATTCACAAC 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CCACCTATGAGGGGATTCAGAAGAAGGAGACAGCCAAGATCAACTGGGACCAGCCGGCAGAGGCCATTCACAAC 666
Query 667 TGGATCCGCGGGAACGACAAGGTGCCGGGAGCCTGGACAGAGGCCTGTGAACAGAAACTGACATTTTTCAACTC 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TGGATCCGCGGGAACGACAAGGTGCCGGGAGCCTGGACAGAGGCCTGTGAACAGAAACTGACATTTTTCAACTC 740
Query 741 AACGCTGAACACTTCAGGCCTGGTGCCCGAGGGAGACGCTTTGCCCATCCCAGGAGCCCATCGGCCAGGGGTGG 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 AACGCTGAACACTTCAGGCCTGGTGCCCGAGGGAGACGCTTTGCCCATCCCAGGAGCCCATCGGCCAGGGGTGG 814
Query 815 TCACCAAAGCAGGACTCATCCTCTTTGGGAATGATGACAAAATGCTGCTGGTGAAGAATATTCAGCTGGAGGAT 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TCACCAAAGCAGGACTCATCCTCTTTGGGAATGATGACAAAATGCTGCTGGTGAAGAATATTCAGCTGGAGGAT 888
Query 889 GGCAAAATGATCCTGGCCTCGAACTTCTTTAAGGGGGCAGCCAGCAGTGTCCTTGAGCTGACAGAGGCAGAGCT 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 GGCAAAATGATCCTGGCCTCGAACTTCTTTAAGGGGGCAGCCAGCAGTGTCCTTGAGCTGACAGAGGCAGAGCT 962
Query 963 GGTTACTGCGGAGGCTGTGCGGAGTGTTTGGCAGCGGATCCTCCCCAAAGTCCTGGAGGTTGAAGACTCCACTG 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GGTTACTGCGGAGGCTGTGCGGAGTGTTTGGCAGCGGATCCTCCCCAAAGTCCTGGAGGTTGAAGACTCCACTG 1036
Query 1037 ATTTCTTCAAGTCAGGGGCCGCGTCTGTGGACGTTGTGAGGCTGGTGGAGGAAGTGAAGGAGCTGTGTGATGGC 1110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 ATTTCTTCAAGTCAGGGGCCGCGTCTGTGGACGTTGTGAGGCTGGTGGAGGAAGTGAAGGAGCTGTGTGATGGC 1110
Query 1111 CTGGAGTTAGAAAATGAAGATGTGTACATGGCATCCACCTTTGGGGACTTCATCCAGCTGTTAGTGAGGAAGCT 1184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 CTGGAGTTAGAAAATGAAGATGTGTACATGGCATCCACCTTTGGGGACTTCATCCAGCTGTTAGTGAGGAAGCT 1184
Query 1185 GCGAGGGGACGATGAGGAGGGCGAGTGCAGCATTGACTACGTGGAAATGGCAGTGAACAAGCGCACTGTCCGCA 1258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 GCGAGGGGACGATGAGGAGGGCGAGTGCAGCATTGACTACGTGGAAATGGCAGTGAACAAGCGCACTGTCCGCA 1258
Query 1259 TGCCCCACCAGCTCTTCATTGGGGGGGAGTTCGTGGATGCCGAGGGCGCCAAGACCTCTGAGACCATCAATCCC 1332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 TGCCCCACCAGCTCTTCATTGGGGGGGAGTTCGTGGATGCCGAGGGCGCCAAGACCTCTGAGACCATCAATCCC 1332
Query 1333 ACCGATGGAAGTGTCATCTGCCAGGTATCCCTGGCCCAAGTCACCGACGTCGACAAGGCAGTGGCCGCAGCCAA 1406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 ACCGATGGAAGTGTCATCTGCCAGGTATCCCTGGCCCAAGTCACCGACGTCGACAAGGCAGTGGCCGCAGCCAA 1406
Query 1407 GGATGCCTTTGAGAATGGACGGTGGGGGAAGATCAGTGCGCGGGACCGGGGCCGGCTGATGTACAG-------G 1473
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1407 GGATGCCTTTGAGAATGGACGGTGGGGGAAGATCAGTGCGCGGGACCGGGGCCGGCTGATGTACAGGGTTTGTG 1480
Query 1474 GCTCCACCATCCCC------------------------------------------------------------ 1487
||..||.|||||||
Sbjct 1481 GCATCATCATCCCCTGGAACTATCCCCTGATGATGCTGTCCTGGAAGACAGCTGCCTGCCTGGCTGCCGGGAAC 1554
Query 1488 ---------ATCAA-CCAGGCCA---GACCCAAC-CGCAACC-------------------------------- 1515
||||| ||.|..|| |||||.|| |.||.||
Sbjct 1555 ACAGTGGTGATCAAGCCTGCTCAGGTGACCCCACTCACAGCCTTGAAGTTTGCAGAGCTGACATTAAAGGCCGG 1628
Query 1516 -------------------------------------------------------------------------- 1515
Sbjct 1629 CATTCCCAAAGGTGTGGTTAACGTCCTCCCAGGATCTGGCTCCCTGGTCGGCCAGAGACTCTCAGACCATCCTG 1702
Query 1516 -------------------------------------------------------------------------- 1515
Sbjct 1703 ATGTGAGGAAAATCGGGTTCACAGGCTCCACAGAGGTGGGCAAGCACATCATGAAAAGCTGTGCCATAAGTAAC 1776
Query 1516 -------------------------------------------------------------------------- 1515
Sbjct 1777 GTGAAGAAGGTGTCCCTGGAACTGGGCGGGAAGTCACCCCTCATCATCTTTGCTGACTGTGACCTCAACAAGGC 1850
Query 1516 -------------------------------------------------------------------------- 1515
Sbjct 1851 TGTGCAGATGGGGATGAGTTCTGTTTTCTTCAACAAAGGAGAGAATTGCATTGCAGCAGGCCGACTCTTTGTGG 1924
Query 1516 -------------------------------------------------------------------------- 1515
Sbjct 1925 AGGACTCCATTCATGATGAGTTCGTGCGGAGAGTGGTAGAAGAGGTGCGGAAGATGAAGGTGGGCAACCCGCTG 1998
Query 1516 -------------------------------------------------------------------------- 1515
Sbjct 1999 GACAGGGACACCGACCACGGGCCGCAGAATCACCATGCCCACCTTGTGAAGCTGATGGAGTACTGCCAGCATGG 2072
Query 1516 -------------------------------------------------------------------------- 1515
Sbjct 2073 CGTGAAGGAAGGGGCCACACTGGTCTGCGGCGGGAATCAGGTCCCTCGGCCAGGGTTCTTCTTTGAGCCAACTG 2146
Query 1516 -------------------------------------------------------------------------- 1515
Sbjct 2147 TTTTCACAGACGTGGAAGACCACATGTTCATAGCCAAGGAGGAGTCCTTCGGGCCTGTCATGATCATCTCTCGG 2220
Query 1516 -------------------------------------------------------------------------- 1515
Sbjct 2221 TTTGCTGATGGGGACTTGGATGCCGTGCTGTCTCGGGCCAATGCCACGGAATTTGGCCTGGCTTCTGGTGTCTT 2294
Query 1516 -------------------------------------------------------------------------- 1515
Sbjct 2295 CACCAGGGACATCAACAAGGCCCTGTATGTCAGTGACAAGCTCCAGGCAGGCACTGTGTTTGTCAACACGTACA 2368
Query 1516 -------------------------------------------------------------------------- 1515
Sbjct 2369 ACAAGACCGACGTGGCCGCTCCCTTCGGAGGATTCAAACAGTCTGGATTTGGCAAAGATCTAGGAGAGGCGGCT 2442
Query 1516 ------------------------------------------ 1515
Sbjct 2443 CTGAACGAGTACCTGCGGGTCAAGACAGTGACCTTCGAATAC 2484
