Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_11567
Subject:
NM_030147.3
Aligned Length:
2853
Identities:
2524
Gaps:
93

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGCGACCGGGACAGGCAAGCACAAGCTGCTGAGTACTGGCCCAACAGAGCCATGGTCCATCCGAGAGAAGTT  74

Query    1  -------------------ATGAGAAGTGGCGATCAAAATTGGGTATCAGTTAGCAGAGCAATCAAGCCCTTTG  55
                               |||||.|||||.|||||.||.||||||||||||||||||||||||||||||||||
Sbjct   75  GTGTTTAGCATCTTCTGTCATGAGGAGTGGGGATCAGAACTGGGTATCAGTTAGCAGAGCAATCAAGCCCTTTG  148

Query   56  CAGAACCTGGCCGCCCTCCAGACTGGTTCTCTCAAAAACATTGTGCTTCCCAGTACTCGGAGCTTTTAGAGACC  129
            |||||||||||||.|||||||||||||||||||||||||||||||||||.|||||.||.|||||.||||||||.
Sbjct  149  CAGAACCTGGCCGGCCTCCAGACTGGTTCTCTCAAAAACATTGTGCTTCTCAGTATTCTGAGCTCTTAGAGACT  222

Query  130  ACTGAGACACCAAAACGGAAACGAGGTGAAAAGGGAGAAGTGGTGGAAACTGTTGAAGATGTTATTGTTCGGAA  203
            ||||||||.||||||||||||||.||||||||.|||||||||||.||||||||||||||||||||||||||.||
Sbjct  223  ACTGAGACTCCAAAACGGAAACGGGGTGAAAAAGGAGAAGTGGTAGAAACTGTTGAAGATGTTATTGTTCGCAA  296

Query  204  ATTGACTGCTGAGCGAGTTGAAGAACTAAAGAAAGTGATAAAGGAAACCCAGGAGAGATATAGACGGCTAAAGA  277
            |.|||||||||||.|||||||||||||.||||||||.||||||||.||.|||||||||||.||.||.||.||.|
Sbjct  297  ACTGACTGCTGAGAGAGTTGAAGAACTGAAGAAAGTCATAAAGGAGACACAGGAGAGATACAGGCGTCTGAAAA  370

Query  278  GAGATGCAGAACTAATTCAAGCTGGACACATGGACAGCAGACTGGATGAGCTTTGCAATGACATTGCAACGAAA  351
            ||||||||||||||||.|||||.||.||||||||||||||||||||||||||.||||||||||||||||.||||
Sbjct  371  GAGATGCAGAACTAATCCAAGCCGGGCACATGGACAGCAGACTGGATGAGCTCTGCAATGACATTGCAATGAAA  444

Query  352  AAGAAATTGGAAGAAGAGGAGGCTGAAGTAAAGAGGAAGGCTACAGATGCTGCATACCAGGCTCGTCAAGCAGT  425
            ||||||||||||||.||.||||||||||||||.||||||||.||.||||||||.||||||||.||.||||||||
Sbjct  445  AAGAAATTGGAAGAGGAAGAGGCTGAAGTAAAAAGGAAGGCCACCGATGCTGCGTACCAGGCGCGACAAGCAGT  518

Query  426  AAAAACACCCCCCCGGAGGTTACCCACTGTGATGGTTCGCTCTCCTATAGATTCTGCCTCCCCAGGAGGTGATT  499
            .|||||.||.||.||.||||||||.|||||||||||.|||||||||.||||.||||||||||||||||||||||
Sbjct  519  GAAAACGCCTCCTCGAAGGTTACCGACTGTGATGGTCCGCTCTCCTGTAGACTCTGCCTCCCCAGGAGGTGATT  592

Query  500  ATCCACTTGGGGACTTGACTCCAACCACTATGGAAGAGGCTACCTCTGGGGTAACCCCCGGGACTTTGCCGAGT  573
            |.||||||||.|||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||
Sbjct  593  ACCCACTTGGAGACTTGACTCCAACCACTATGGAAGAGGCTACCTCTGGGGTAACCCCTGGGACTTTGCCGAGT  666

Query  574  ACCCCAGTCACCTCGTTTCCTGGGATTCCTGACACCCTTCCTCCAGGCTCTGCACCCTTAGAAGCCCCCATGAC  647
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  ACCCCAGTCACCTCGTTTCCTGGGATTCCTGACACCCTTCCTCCAGGCTCTGCACCCTTAGAAGCCCCCATGAC  740

Query  648  CCCAGTAACAGATGATTCACCCCAGAAAAAGATGCTTGGACAGAAAGCAACTCCACCCCCCTCCCCTCTGCTGT  721
            ||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  CCCAATAACAGATGATTCACCCCAGAAAAAGATGCTTGGACAGAAAGCAACTCCACCCCCCTCCCCTCTGCTGT  814

Query  722  CAGAGCTCTTGAAGAAGGGCAGCCTCCTGCCTACTAGCCCCAGACTGGTCAATGAGAGTGAAATGGCTGTGGCT  795
            |||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||.||||..|.
Sbjct  815  CAGAGCTCTTGAAGAAGGGCAGCCTCCTGCCTACTAGCCCCAGACTGGTGAATGAGAGTGAAATGCCTGTACCC  888

Query  796  TCTGGCCACCTGAACAGTACAGGTGTCCTCCTGGAGGTAGGCGGGGTCCTTCCCATGATACATGGTGGGGAGAT  869
            .|||||||.||||||||.|||||.||.|||.||||||||||.|||||.||||||||||||||||||||||||||
Sbjct  889  CCTGGCCATCTGAACAGCACAGGGGTTCTCTTGGAGGTAGGAGGGGTTCTTCCCATGATACATGGTGGGGAGAT  962

Query  870  ACAGCAAACACCCAATACTGTTGCAGCCTCCCCTGCTGCATCAGGTGCTCCCACTCTTTCCCGGCTTTTAGAAG  943
            |||||.||||.|||.|.||||.||.||||||||.|||||.||||||||||||||||||||||||||||||||||
Sbjct  963  ACAGCCAACAACCAGTGCTGTGGCGGCCTCCCCGGCTGCCTCAGGTGCTCCCACTCTTTCCCGGCTTTTAGAAG  1036

Query  944  CTGGTCCTACACAGTTCACCACACCTCTTGCTTCCTTCACTACTGTTGCCAGTGAGCCTCCAGTTAAACTTGTG  1017
            ||||.||.||||||||||||||.||||||.||||||||||||||||||||||||||||.||||||||.||||||
Sbjct 1037  CTGGGCCCACACAGTTCACCACTCCTCTTCCTTCCTTCACTACTGTTGCCAGTGAGCCGCCAGTTAAGCTTGTG  1110

Query 1018  CCACCCCCTGTAGAGTCTGTGTCCCAAGCTACCATTGTCATGATGCCTGCGCTGCCAGCACCATCCTCTGCTCC  1091
            ||||||||||||||||||||||||||.||||||||||||||||||||.||||||||||||||||||||||||.|
Sbjct 1111  CCACCCCCTGTAGAGTCTGTGTCCCAGGCTACCATTGTCATGATGCCCGCGCTGCCAGCACCATCCTCTGCTGC  1184

Query 1092  GGCTGTCTCCACTACTGAAAGTGTAGCTCCAGTGAGTCAACCCGACAACTGTGTTCCCATGGAGGCTGTGGGGG  1165
            |||||||||||||.|||||||||.||||||||||||.||.||.||...||||||.|||.||||.||||||||||
Sbjct 1185  GGCTGTCTCCACTTCTGAAAGTGGAGCTCCAGTGAGCCAGCCTGAGCCCTGTGTACCCCTGGAAGCTGTGGGGG  1258

Query 1166  ATCCACATACTGTGACTGTTTCCATGGACAGCAGTGAAATATCCATGATCATCAATTCTATCAAAGAAGAGTGT  1239
            ||||||||||||||||||||||||||||.||||.||||||.|||||||||||.|||||.|||||||||||||||
Sbjct 1259  ATCCACATACTGTGACTGTTTCCATGGATAGCAATGAAATCTCCATGATCATTAATTCCATCAAAGAAGAGTGT  1332

Query 1240  TTTCGATCAGGGGTAGCAGAGGCTCCTGTTGGATCAAAGGCTCCCAGCATAGATGGGAAGGAAGAATTAGATCT  1313
            ||.||.||||||||||||||||||||||.|||||||||||||||.||||||||||||||||||||.||.|||||
Sbjct 1333  TTCCGCTCAGGGGTAGCAGAGGCTCCTGGTGGATCAAAGGCTCCAAGCATAGATGGGAAGGAAGACTTGGATCT  1406

Query 1314  GGCTGAGAAGATGGATATTGCTGTGTCTTACACAGGTGAAGAGCTGGATTTTGAGACTGTTGGAGACATCATTG  1387
            .||.|||||||||||||||||||||||||||||||||||||||.||||.|||||.||.||||||||||||||||
Sbjct 1407  AGCGGAGAAGATGGATATTGCTGTGTCTTACACAGGTGAAGAGTTGGACTTTGAAACAGTTGGAGACATCATTG  1480

Query 1388  CCATCATTGAGGACAAGGTAGATGATCATCCTGAAGTGCTGGATGTGGCAGCAGTGGAAGCAGCACTGTCATTT  1461
            |||||||||||||||||||.||||||||.|||||||||||||||||||||||.||.|||||.||..|.||.||.
Sbjct 1481  CCATCATTGAGGACAAGGTGGATGATCACCCTGAAGTGCTGGATGTGGCAGCGGTAGAAGCGGCGTTATCGTTC  1554

Query 1462  TGTGAAGAAAATGATGATCCTCAGTCCCTGCCTGGCCCCTGGGAGCATCCTATCCAGCAGGAGCGGGACAAGCC  1535
            ||||||||.||||||||.|||||||||||||||||||||||||||||.|||||||||||||||||.||||||||
Sbjct 1555  TGTGAAGAGAATGATGACCCTCAGTCCCTGCCTGGCCCCTGGGAGCACCCTATCCAGCAGGAGCGCGACAAGCC  1628

Query 1536  AGTACCTCTCCCTGCACCAGAAATGACGGTCAAGCAAGAGAGACTGGACTTTGAGGAAACGGAAAACAAGGGAA  1609
            |||||||||.||.||||||||.|||||.|||||.||||||||.||.|||||.||||||.|.||||||||.||..
Sbjct 1629  AGTACCTCTGCCAGCACCAGAGATGACAGTCAAACAAGAGAGGCTAGACTTCGAGGAATCAGAAAACAAAGGGC  1702

Query 1610  TACATGAACTGGTGGACATCAGGGAGCCCAGTGCAGAGATCAAGGTGGAACCTGCAGAACCAGAGCCAGTCATT  1683
            |.|||||.|||||||||||||||||..||.|||..|||||.|||||||||||..||||.||||||||||.|||.
Sbjct 1703  TCCATGACCTGGTGGACATCAGGGATTCCGGTGTTGAGATTAAGGTGGAACCCACAGAGCCAGAGCCAGGCATG  1776

Query 1684  TCAGGAGCCGAAATAGTAGCTGGAGTTGTTCCAGCCACAAGTATGGAGCCACCAGAACTCAGGAGTCAGGACTT  1757
            ||.||.||.||.||||||||||||||||.|||||...|||||||||||||||||||||||||||||||.||||.
Sbjct 1777  TCTGGGGCTGAGATAGTAGCTGGAGTTGGTCCAGTTCCAAGTATGGAGCCACCAGAACTCAGGAGTCAAGACTC  1850

Query 1758  AGATGAGGAACTGGGAAGTACTGCAGCTGGAGAGATTGTTGAAGCAGATGTTGCCATTGGGAAAGGCGATGAGA  1831
            ||||||.||||...|||||.|||||||||||||.||||.|||.|||||||.|.|||.|||||||||||||||||
Sbjct 1851  AGATGAAGAACCTAGAAGTTCTGCAGCTGGAGACATTGGTGAGGCAGATGGTTCCAGTGGGAAAGGCGATGAGA  1924

Query 1832  CTCCACTTACAAATGTGAAGACAGAGGCATCCCCTGAAAGCATGTTGTCTCCATCACATGGCTCAAATCCCATT  1905
            ..||||||.||..||||||||||||||||||||||||.|||||||||||||||||||||||||||||||..|||
Sbjct 1925  GGCCACTTTCAGCTGTGAAGACAGAGGCATCCCCTGAGAGCATGTTGTCTCCATCACATGGCTCAAATCTTATT  1998

Query 1906  GAAGATCCTTTAGAGGCAGAGACTCAGCACAAGTTTGAAATGTCAGACTCATTGAAAGAAGAATCAGGGACTAT  1979
            ||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999  GAAGATCCTTTAGAGGCAGAGACTCAACACAAGTTTGAAATGTCAGACTCATTGAAAGAAGAATCAGGGACTAT  2072

Query 1980  TTTTGGAAGCCAGATAAAGGATGCCCCAGGTGAGGATGAGGAGGAAGATGGTGTCAGTGAAGCGGCCAGCCTAG  2053
            |||||||||||||||||||||||||||||||||.||||||||.||||||||.|||||||||||.||.|||||||
Sbjct 2073  TTTTGGAAGCCAGATAAAGGATGCCCCAGGTGACGATGAGGAAGAAGATGGAGTCAGTGAAGCAGCTAGCCTAG  2146

Query 2054  AGGAGCCTAAGGAAGAGGATCAAGGAGAAGGCTACTTGTCAGAAATGGATAATGAACCTCCTGTGAGCGAGAGT  2127
            ||||||||||||||||||||||||||||||||||.|||||.||.|||||||||||.||.||||||||.||||||
Sbjct 2147  AGGAGCCTAAGGAAGAGGATCAAGGAGAAGGCTATTTGTCTGAGATGGATAATGAGCCCCCTGTGAGTGAGAGT  2220

Query 2128  GATGATGGCTTCAGCATACACAATGCTACACTGCAGTCACACACACTGGCAGACTCCATCCCCAGCAGCCCTGC  2201
            |||||||||||.||.|||||.||.||.|||||||||||||||||.|||||||||||||||||.|||||||||||
Sbjct 2221  GATGATGGCTTTAGTATACATAACGCCACACTGCAGTCACACACTCTGGCAGACTCCATCCCAAGCAGCCCTGC  2294

Query 2202  TTCTTCACAGTTCTCTGTCTGTAGTGAGGATCAGGAAGCTATTCAGGCACAGAAAATTTGGAAGAAAGCCATCA  2275
            .||.||.|||||.||.||.||.|||||.|||||.|||||.||||||||.||||||||.||||||||||||||||
Sbjct 2295  CTCCTCCCAGTTTTCCGTGTGCAGTGAAGATCAAGAAGCAATTCAGGCTCAGAAAATATGGAAGAAAGCCATCA  2368

Query 2276  TGCTTGTATGGAGAGCTGCAGCTAATCATAGGTATGCCAATGTCTTCCTGCAGCCTGTTACAGATGACATAGCA  2349
            |||||||||||||.||||||||.||||||||||||||||||||.||||||||.||||||||||||||||||||.
Sbjct 2369  TGCTTGTATGGAGGGCTGCAGCAAATCATAGGTATGCCAATGTGTTCCTGCAACCTGTTACAGATGACATAGCT  2442

Query 2350  CCTGGCTACCACAGCATTGTGCAGAGGCCTATGGATTTGTCAACTATTAAGAAAAACATAGAAAATGGACTGAT  2423
            |||||.|||||.||||||||.||||||||||||||||||||||||||.|||||||||||.||||||||||||||
Sbjct 2443  CCTGGTTACCATAGCATTGTACAGAGGCCTATGGATTTGTCAACTATAAAGAAAAACATTGAAAATGGACTGAT  2516

Query 2424  CCGAAGCACAGCTGAATTTCAGCGTGACATTATGCTGATGTTTCAGAATGCTGTAATGTACAATAGCTCAGACC  2497
            |||||||||||||||.||||||||||||||.|||||||||||||||||||||||.|||||||||||||||||||
Sbjct 2517  CCGAAGCACAGCTGAGTTTCAGCGTGACATCATGCTGATGTTTCAGAATGCTGTTATGTACAATAGCTCAGACC  2590

Query 2498  ATGATGTCTATCACATGGCAGTGGAGATGCAGCGAGATGTCTTGGAACAGATCCAGCAATTCTTGGCCACGCAG  2571
            ||||||||||||||||||||||.|||||||||.|||||||||||||||||||||||||||||||||||||.|||
Sbjct 2591  ATGATGTCTATCACATGGCAGTAGAGATGCAGAGAGATGTCTTGGAACAGATCCAGCAATTCTTGGCCACACAG  2664

Query 2572  TTGATTATGCAAACATCCGAGTCTGGGATCAGTGCTAAAAGTCTTCGAGGGAGAGATTCTACCCGCAAACAGGA  2645
            |||||||||||||||||.||||||||.|||||||||||||||||.||.||||||||.||||||||.|||||.||
Sbjct 2665  TTGATTATGCAAACATCTGAGTCTGGAATCAGTGCTAAAAGTCTCCGGGGGAGAGACTCTACCCGAAAACAAGA  2738

Query 2646  TGCTTCAGAGAAGGACAGTGTCCCAATGGGCTCTCCTGCCTTCCTTCTCTCTCTCTTTGATGGAGGAACCAGGG  2719
            ||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||.||||||||||
Sbjct 2739  TGCTTCAGAGAAGGACAGTGTCCCCATGGGCTCTCCTGCCTTCCTTCTCTCTCTCTTTGATGGGGGAACCAGGG  2812

Query 2720  GACGCCGCTGTGCCATTGAAGCAGATATGAAGATGAAAAAG  2760
            |||||||||||||||||||||||||||||||||||||.|||
Sbjct 2813  GACGCCGCTGTGCCATTGAAGCAGATATGAAGATGAAGAAG  2853

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