Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11582
- Subject:
- NM_001278428.3
- Aligned Length:
- 1949
- Identities:
- 1134
- Gaps:
- 661
Alignment
Query 1 ATGACGCCCGCCCTCACAGCCCTGCTCTGCCTTGGGCTGAGTCTGGGCCCCAGGACCCGCGTGCAGGCAGGGCC 74
||||..|||.||.||||.||.|||||||||||.|||||||||||||||||||||||||.|.|||||||||||||
Sbjct 1 ATGATCCCCACCTTCACGGCTCTGCTCTGCCTCGGGCTGAGTCTGGGCCCCAGGACCCACATGCAGGCAGGGCC 74
Query 75 CTTCCCCAAACCCACCCTCTGGGCTGAGCCAGGCTCTGTGATCAGCTGGGGGAGCCCCGTGACCATCTGGTGTC 148
|.|||||||||||||||||||||||||||||||||||||||||||||||||||.|.|.||||||||||||||||
Sbjct 75 CCTCCCCAAACCCACCCTCTGGGCTGAGCCAGGCTCTGTGATCAGCTGGGGGAACTCTGTGACCATCTGGTGTC 148
Query 149 AGGGGAGCCTGGAGGCCCAGGAGTACCGACTGGATAAAGAGGGAAGCCCAGAGCCCTTGGACAGAAATAACCCA 222
||||||.|||||||||.|.|||||||||.|||||||||||||.||||||||..||||.|||||||.|.||||||
Sbjct 149 AGGGGACCCTGGAGGCTCGGGAGTACCGTCTGGATAAAGAGGAAAGCCCAGCACCCTGGGACAGACAGAACCCA 222
Query 223 CTGGAACCCAAGAACAAGGCCAGATTCTCCATCCCATCCATGACAGAGCACCATGCGGGGAGATACCGCTGCCA 296
|||||.||||||||||||||||||||||||||||||||||||||||||.||.||||.||||||||||||||..|
Sbjct 223 CTGGAGCCCAAGAACAAGGCCAGATTCTCCATCCCATCCATGACAGAGGACTATGCAGGGAGATACCGCTGTTA 296
Query 297 CTATTACAGCTCTGCAGGCTGGTCAGAGCCCAGCGACCCCCTGGAGCTGGTGATGACAGGATTCTACAACAAAC 370
||||..||||.|||.||||||||||.|||||||.|||||||||||||||||||||||||||..|||||..||||
Sbjct 297 CTATCGCAGCCCTGTAGGCTGGTCACAGCCCAGTGACCCCCTGGAGCTGGTGATGACAGGAGCCTACAGTAAAC 370
Query 371 CCACCCTCTCAGCCCTGCCCAGCCCTGTGGTGGCCTCAGGGGGGAATATGACCCTCCGATGTGGCTCACAGAAG 444
|||||||.|||||||||||.||.|||
Sbjct 371 CCACCCTTTCAGCCCTGCCGAGTCCT------------------------------------------------ 396
Query 445 GGATATCACCATTTTGTTCTGATGAAGGAAGGAGAACACCAGCTCCCCCGGACCCTGGACTCACAGCAGCTCCA 518
Sbjct 397 -------------------------------------------------------------------------- 396
Query 519 CAGTGGGGGGTTCCAGGCCCTGTTCCCTGTGGGCCCCGTGAACCCCAGCCACAGGTGGAGGTTCACATGCTATT 592
Sbjct 397 -------------------------------------------------------------------------- 396
Query 593 ACTATTATATGAACACCCCCCAGGTGTGGTCCCACCCCAGTGACCCCCTGGAGATTCTGCCCTCAGGCGTGTCT 666
Sbjct 397 -------------------------------------------------------------------------- 396
Query 667 AGGAAGCCCTCCCTCCTGACCCTGCAGGGCCCTGTCCTGGCCCCTGGGCAGAGCCTGACCCTCCAGTGTGGCTC 740
Sbjct 397 -------------------------------------------------------------------------- 396
Query 741 TGATGTCGGCTACGACAGATTTGTTCTGTATAAGGAGGGGGAACGTGACTTCCTCCAGCGCCCTGGCCAGCAGC 814
|||
Sbjct 397 ------------------------------------------------CTT----------------------- 399
Query 815 CCCAGGCTGGGCTCTCCCAGGCCAACTTCACCCTGGGCCCTGTGAGCCGCTCCCACGGGGGCCAGTACAGGTGC 888
Sbjct 400 -------------------------------------------------------------------------- 399
Query 889 TATGGTGCACACAACCTCTCCTCCGAGTGGTCGGCCCCCAGCGACCCCCTGAACATCCTGATGGCAGGACAGAT 962
Sbjct 400 -------------------------------------------------------------------------- 399
Query 963 CTATGACACCGTCTCCCTGTCAGCACAGCCGGGCCCCACAGTGGCCTCAGGAGAGAACGTGACCCTGCTGTGTC 1036
|||.||||||||.|||.|||||||||||||||||
Sbjct 400 ----------------------------------------GTGACCTCAGGAAAGAGCGTGACCCTGCTGTGTC 433
Query 1037 AGTCATGGTGGCAGTTTGACACTTTCCTTCTGACCAAAGAAGGGGCAGCCCATCCCCCACTGCGTCTGAGATCA 1110
|||||.||.|.|...|.||||||||.|||||||.|||.||..|||||||||||||||.|||||.||||||||||
Sbjct 434 AGTCACGGAGCCCAATGGACACTTTTCTTCTGATCAAGGAGCGGGCAGCCCATCCCCTACTGCATCTGAGATCA 507
Query 1111 ATGTACGGAGCTCATAAGTACCAGGCTGAATTCCCCATGAGTCCTGTGACCTCAGCCCACGCGGGGACCTACAG 1184
..|.||||||||||..||.||||||||||||||||||||||||||||||||||||..||||.||||||||||||
Sbjct 508 GAGCACGGAGCTCAGCAGCACCAGGCTGAATTCCCCATGAGTCCTGTGACCTCAGTGCACGGGGGGACCTACAG 581
Query 1185 GTGCTACGGCTCATACAGCTCCAACCCCCACCTGCTGTCTTTCCCCAGTGAGCCCCTGGAACTCATGGTCTCAG 1258
|||||.|.|||||.||.|||.|..||.|.||||||||||...|||||||||.||||||||.|||||.|||||||
Sbjct 582 GTGCTTCAGCTCACACGGCTTCTCCCACTACCTGCTGTCACACCCCAGTGACCCCCTGGAGCTCATAGTCTCAG 655
Query 1259 GACACTCTGGAGGCT-CCAGCCTCCCACCCACAGGGCC-----------------GCCCT-------------- 1300
||..|| ||||||.| ||||.|.|.||||||||.||.| |||||
Sbjct 656 GATCCT-TGGAGGGTCCCAGGCCCTCACCCACAAGGTCCGTCTCAACAGCTGCAGGCCCTGAGGACCAGCCCCT 728
Query 1301 ---------------------CCACACCTGGTCTGGGAAGATACCTGGAGGTTTTGATTGGGGTCTCGGTGGCC 1353
||||| .|||||||.||||..||..||||||..||||.|||||||.|||||.|
Sbjct 729 CATGCCTACAGGGTCAGTCCCCCACA-GTGGTCTGAGAAGGCACTGGGAGGTACTGATCGGGGTCTTGGTGGTC 801
Query 1354 TTCGTCCTGCTGCTCTTCCTCCTCCTCTTCCTCCTCCTCCGACGTCAGCGTCACAGCAAACACAGGACATCTGA 1427
|.|.|||||||.||||.|||||||||||||||||||||||.||....||||||..|.|||||||||||||..|.
Sbjct 802 TCCATCCTGCTTCTCTCCCTCCTCCTCTTCCTCCTCCTCCAACACTGGCGTCAGGGAAAACACAGGACATTGGC 875
Query 1428 CCAGAGAAAGACTGATTTCCAGCGTCCTGCAGGGGCTGCGGAGACAGAGCCCAAGGACAGGGGCCTGCTGAGGA 1501
|||||||.||.||||||||||.||||||.||||||||||.|||.||||||||||||||.|||||||.|.|||||
Sbjct 876 CCAGAGACAGGCTGATTTCCAACGTCCTCCAGGGGCTGCCGAGCCAGAGCCCAAGGACGGGGGCCTACAGAGGA 949
Query 1502 GGTCCAGCCCAGCTGCTGACGTCCAGGAAGAAAACCTCT---ATGCTGCCGTGAAGGACACACAGTCTGAGGAC 1572
|||||||||||||||||||||||||||.|||||||.||| .|||||||||||||.||||||||.||||||||
Sbjct 950 GGTCCAGCCCAGCTGCTGACGTCCAGGGAGAAAACTTCTCAGGTGCTGCCGTGAAGAACACACAGCCTGAGGAC 1023
Query 1573 AGGGTGGAGCTGGACAGTCAGAGCCCACACGATGAAGACCCCCAGGCAGTGACGTATGCCCCGGTGAAACACTC 1646
.|||||||..||||||.||.||||||||||||||||||||||||||||||||||||||||..||||||||||||
Sbjct 1024 GGGGTGGAAATGGACACTCGGAGCCCACACGATGAAGACCCCCAGGCAGTGACGTATGCCAAGGTGAAACACTC 1097
Query 1647 CAGTCCTAGGAGAGAAATGGCCTCTCCTCCCTCCTCACTGTCTGGGGAATTCCTGGACACAAAGGACAGACAGG 1720
|||.||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||
Sbjct 1098 CAGACCTAGGAGAGAAATGGCCTCTCCTCCCTCCCCACTGTCTGGGGAATTCCTGGACACAAAGGACAGACAGG 1171
Query 1721 TGGAAGAGGACAGGCAGATGGACACTGAGGCTGCTGCATCTGAAGCCTCCCAGGATGTGACCTACGCCCAGCTG 1794
..|||||||||||.|||||||||||||||||||||||||||||||||.|||||||||||||||||||||.||||
Sbjct 1172 CAGAAGAGGACAGACAGATGGACACTGAGGCTGCTGCATCTGAAGCCCCCCAGGATGTGACCTACGCCCGGCTG 1245
Query 1795 CACAGCTTGACCCTTAGACGGAAGGCAACTGAGCCTCCTCCATCCCAGGAAGGGGAACCTCCAGCTGAGCCCAG 1868
||||||||.|||||.||||.|||||||||||||||||||||||||||||||||||...||||||||||||||||
Sbjct 1246 CACAGCTTTACCCTCAGACAGAAGGCAACTGAGCCTCCTCCATCCCAGGAAGGGGCCTCTCCAGCTGAGCCCAG 1319
Query 1869 CATCTACGCCACTCTGGCCATCCAC 1893
..||||.||||||||||||||||||
Sbjct 1320 TGTCTATGCCACTCTGGCCATCCAC 1344
