Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11582
- Subject:
- NR_104098.2
- Aligned Length:
- 2456
- Identities:
- 1583
- Gaps:
- 757
Alignment
Query 1 ---------------------------------------ATGACGCCCGCCCTCACAGCCCTGCTCTGCCTTGG 35
|||||.|||.|||||.||||||||||||||||.||
Sbjct 1 ATCCCTCTGCAGAGCCCGGGGTCACCAGGAGGAGACGCCATGACCCCCACCCTCGCAGCCCTGCTCTGCCTAGG 74
Query 36 GCTGAGTCTGGGCCCCAGGACCCGCGTGCAGGCAGGGCCCTTCCCCAAACCCACCCTCTGGGCTGAGCCAGGCT 109
|||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GCTGAGTCTGGGCCCCAGGACCCACGTGCAGGCAGGGCCCTTCCCCAAACCCACCCTCTGGGCTGAGCCAGGCT 148
Query 110 CTGTGATCAGCTGGGGGAGCCCCGTGACCATCTGGTGTCAGGGGAGCCTGGAGGCCCAGGAGTACCGACTGGAT 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 CTGTGATCAGCTGGGGGAGCCCCGTGACCATCTGGTGTCAGGGGAGCCTGGAGGCCCAGGAGTACCGACTGGAT 222
Query 184 AAAGAGGGAAGCCCAGAGCCCTTGGACAGAAATAACCCACTGGAACCCAAGAACAAGGCCAGATTCTCCATCCC 257
||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 AAAGAGGGAAGCCCAGAGCCCTGGGACAGAAATAACCCACTGGAACCCAAGAACAAGGCCAGATTCTCCATCCC 296
Query 258 ATCCATGACAGAGCACCATGCGGGGAGATACCGCTGCCACTATTACAGCTCTGCAGGCTGGTCAGAGCCCAGCG 331
||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 ATCCATAACAGAGCACCATGCGGGGAGATACCGCTGCCACTATTACAGCTCTGCAGGCTGGTCAGAGCCCAGCG 370
Query 332 ACCCCCTGGAGCTGGTGATGACAGGATTCTACAACAAACCCACCCTCTCAGCCCTGCCCAGCCCTGTGGTGGCC 405
||||||||||||||||||||||||||..|||.|.||||||||||||||||||||||||||||||||||||||||
Sbjct 371 ACCCCCTGGAGCTGGTGATGACAGGAGCCTATAGCAAACCCACCCTCTCAGCCCTGCCCAGCCCTGTGGTGGCC 444
Query 406 TCAGGGGGGAATATGACCCTCCGATGTGGCTCACAGAAGGGATATCACCATTTTGTTCTGATGAAGGAAGGAGA 479
||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 TCAGGGGGGAATATGACCCTCCAATGTGGCTCACAGAAGGGATATCACCATTTTGTTCTGATGAAGGAAGGAGA 518
Query 480 ACACCAGCTCCCCCGGACCCTGGACTCACAGCAGCTCCACAGTGGGGGGTTCCAGGCCCTGTTCCCTGTGGGCC 553
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 ACACCAGCTCCCCCGGACCCTGGACTCACAGCAGCTCCACAGTGGGGGGTTCCAGGCCCTGTTCCCTGTGGGCC 592
Query 554 CCGTGAACCCCAGCCACAGGTGGAGGTTCACATGCTATTACTATTATATGAACACCCCCCAGGTGTGGTCCCAC 627
||||||||||||||||
Sbjct 593 CCGTGAACCCCAGCCA---------------------------------------------------------- 608
Query 628 CCCAGTGACCCCCTGGAGATTCTGCCCTCAGGCGTGTCTAGGAAGCCCTCCCTCCTGACCCTGCAGGGCCCTGT 701
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 609 ----------------------------CAGGCGTGTCTAGGAAGCCCTCCCTCCTGACCCTGCAGGGCCCTGT 654
Query 702 CCTGGCCCCTGGGCAGAGCCTGACCCTCCAGTGTGGCTCTGATGTCGGCTACGACAGATTTGTTCTGTATAAGG 775
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 655 CCTGGCCCCTGGGCAGAGCCTGACCCTCCAGTGTGGCTCTGATGTCGGCTACGACAGATTTGTTCTGTATAAGG 728
Query 776 AGGGGGAACGTGACTTCCTCCAGCGCCCTGGCCAGCAGCCCCAGGCTGGGCTCTCCCAGGCCAACTTCACCCTG 849
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 729 AGGGGGAACGTGACTTCCTCCAGCGCCCTGGCCAGCAGCCCCAGGCTGGGCTCTCCCAGGCCAACTTCACCCTG 802
Query 850 GGCCCTGTGAGCCGCTCCCACGGGGGCCAGTACAGGTGCTATGGTGCACACAACCTCTCCTCCGAGTGGTCGGC 923
|||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 803 GGCCCTGTGAGCCCCTCCCACGGGGGCCAGTACAGGTGCTATGGTGCACACAACCTCTCCTCCGAGTGGTCGGC 876
Query 924 CCCCAGCGACCCCCTGAACATCCTGATGGCAGGACAGATCTATGACACCGTCTCCCTGTCAGCACAGCCGGGCC 997
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 877 CCCCAGCGACCCCCTGAACATCCTGATGGCAGGACAGATCTATGACACCGTCTCCCTGTCAGCACAGCCGGGCC 950
Query 998 CCACAGTGGCCTCAGGAGAGAACGTGACCCTGCTGTGTCAGTCATGGTGGCAGTTTGACACTTTCCTTCTGACC 1071
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 951 CCACAGTGGCCTCAGGAGAGAACGTGACCCTGCTGTGTCAGTCATGGTGGCAGTTTGACACTTTCCTTCTGACC 1024
Query 1072 AAAGAAGGGGCAGCCCATCCCCCACTGCGTCTGAGATCAATGTACGGAGCTCATAAGTACCAGGCTGAATTCCC 1145
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1025 AAAGAAGGGGCAGCCCATCCCCCACTGCGTCTGAGATCAATGTACGGAGCTCATAAGTACCAGGCTGAATTCCC 1098
Query 1146 CATGAGTCCTGTGACCTCAGCCCACGCGGGGACCTACAGGTGCTACGGCTCATACAGCTCCAACCCCCACCTGC 1219
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1099 CATGAGTCCTGTGACCTCAGCCCACGCGGGGACCTACAGGTGCTACGGCTCATACAGCTCCAACCCCCACCTGC 1172
Query 1220 TGTCTTTCCCCAGTGAGCCCCTGGAACTCATGGTCTCAGGACACTCTGGAGGCTCCAGCCTCCCACCCACAGGG 1293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1173 TGTCTTTCCCCAGTGAGCCCCTGGAACTCATGGTCTCAGGACACTCTGGAGGCTCCAGCCTCCCACCCACAGGG 1246
Query 1294 CCGCCCTCCACACCTG--------GTCTGGGAAGATAC-CTGGAGGTTTTGAT-----TGGGGTCTCGGTGGCC 1353
|||||||||||||||| |.|..|||..|.|| .|||||..|.|.|| |||| |..||..|.|
Sbjct 1247 CCGCCCTCCACACCTGCCTCACACGCCAAGGATTACACAGTGGAGAATCTCATCCGCATGGG--CATGGCAGGC 1318
Query 1354 TTCGTCCTGCTGCTCTTCCTC---CTCCTCTTCCTCCTCCTCCGACG-TCAGCGTCACAGCAAACACAGGACAT 1423
||.||||||.|| |||||| .|.||.|| .|..||.| |||| |||||
Sbjct 1319 TTGGTCCTGGTG---TTCCTCGGGATTCTGTT-------ATTTGAGGCTCAG---CACAG-------------- 1365
Query 1424 CTGACCAGAGAAAGACTGATTTCCA----GCGTCCTGCAGGGG--CTGCGGA---GACA--------------- 1473
|||||||||..| ||| ||..||.|.|||.| |.||||| ||||
Sbjct 1366 ----CCAGAGAAACCC------CCAAGATGCAGCCGGGAGGTGAACAGCGGAGAGGACAATGCACCCTTCAGCG 1429
Query 1474 -----GAGCC-CAAGGACAGGGGCCTGCTGAGGAGGTCCAGCCCAGCTGCTGACGTC-CAGGAAGAAAACCTCT 1540
||||| ||.||||| |..|||.||| ||| |.||.|.| |.|||.||.|| |||
Sbjct 1430 TGGTGGAGCCTCAGGGACA--GATCTGATGA-----TCC----------CAGAAGGCTCTGGAGGACAA--TCT 1484
Query 1541 ATG--CTGCC--------GTGA------AGGACACACAGTCTGAGGACAGGGTGGAGCTGGACAGTCAGAGCCC 1598
|.| || || |||| |||.|||||| |||.||| ||..||.| ||| ||||| .|||
Sbjct 1485 AGGACCT-CCAGAGGGGGGTGAGATTTCAGGCCACACA--CTGTGGA-AGCTTGTA--TGG-CAGTC---TCCC 1548
Query 1599 ACAC---------------GATGAAGACCCCCAGGCAGT----GA-------------CGTATGC--CCCGGTG 1638
||.| ||||| .||||||..|| || |.||||| .|.||
Sbjct 1549 ACCCTCATGTGTTCAATCTGATGA----TCCCAGGAGGTTCTGGAACAAAATCTACAGCCTATGCTTTCTGG-- 1616
Query 1639 AAACACTC-------CAGTCCTAGGAGAGA------AAT----------GGCCTCTCCTCCCTCCTCACTGTCT 1689
||..|| ||.|||| |.||||| ||| ||..||.||....|.|| |||.||
Sbjct 1617 --ACTATCTGTCGATCATTCCT-GAAGAGAGGGATCAATGTTGAGACGGGGTTTCACCATGTTGCT--CTGGCT 1685
Query 1690 GG---GGAATTCCTGGACACAAAGG-------ACAG--------------------------ACAGGTGGAAG- 1726
|| .|||.|||| ||| |.|||| .||| |||||||..||
Sbjct 1686 GGTCTCGAACTCCT-GAC-CTAAGGTGATCCACCAGCGTCGGCTTTCCATAGTGCTGGGATTACAGGTGTGAGC 1757
Query 1727 ----AGGACAGGC----------AGAT----------GGA---------------------CACTGAGG----- 1750
|.|.|.||| | || ||| ||||.|.|
Sbjct 1758 CACTATGCCTGGCCAACTTTTATA-ATTTCTGTGCTGGGAACATTCCAAATCTTCATTTCTCACTCATGTGGAA 1830
Query 1751 -----------CTGCTGC-----AT----------CTGAAGCCTCCCAGG--ATGTGACCTACGC-------CC 1789
|||.||| || |||| .|||.|||| .||..||.|||.| ||
Sbjct 1831 AATACAATAATCTGTTGCTAACTATGGTCACCCTACTGA--GCTCTCAGGCCCTGGAACTTACTCCTTCTCTCC 1902
Query 1790 AGCTGCACAGCTTGACCCTTAGACGGAAGGCAACTGAGCCTC-CTCCATCCCAGGAAGGGGAACCTCCAGC--- 1859
|.|||.|...||..||||.|..|| ||| |||| |||||||||.| .|||||| |
Sbjct 1903 ACCTGTATTTCTGCACCCGTCCAC------CAA-----CCTCTCTCCATCCCTG--------TCCTCCA-CACT 1956
Query 1860 ----TGAGCCCAGCATCT----AC-GCCA-------CTCTGGCCAT--------CCAC---------------- 1893
|| |||||.||| || .||| |||| ||||| ||||
Sbjct 1957 CCCTTG---CCAGCCTCTGTTGACAACCATTCTACTCTCT-GCCATCACAAGGCCCACTTTTGTAGCTTCCGCG 2026
Query 1894 -------------------------------------------------------------------------- 1893
Sbjct 2027 TGAGTGAGAACATGCTCCTCTTTCTGGGCCTGGCTTATTTCACTGAACATAATGTCTTCCAGATTCATCTGTGT 2100
Query 1894 -------------------------------------------------------------------------- 1893
Sbjct 2101 TGCTGAACATGGTACAATTTCCTTCTTTTTATGCCTGAATATTATTTCATTGTGTATATAGACCACATGTTCCT 2174
Query 1894 -------------------------------------------------------------------------- 1893
Sbjct 2175 TATCCATTCATCCATTGATGGACATAGGTTGATTCCATATCTTGGCTATTGTGAATACTGCTGCAATAAACATG 2248
Query 1894 -------------- 1893
Sbjct 2249 GCAATGCAGACACC 2262
