Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_11582
Subject:
XR_001756804.1
Aligned Length:
2263
Identities:
1871
Gaps:
370

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGACAAGAAGGACCCAGCCTCCGAGCGGCCACACCCTGTGTGTCTCTCTGTCCTGCCAGCACTGAGGGCTCAT  74

Query    1  -------------------------------------ATGACGCCCGCCCTCACAGCCCTGCTCTGCCTTGGGC  37
                                                 |||||||||||||||||||||||||||||||||||||
Sbjct   75  CCCTCTGCAGAGCGCGGGGTCACCGGGAGGAGACGCCATGACGCCCGCCCTCACAGCCCTGCTCTGCCTTGGGC  148

Query   38  TGAGTCTGGGCCCCAGGACCCGCGTGCAGGCAGGGCCCTTCCCCAAACCCACCCTCTGGGCTGAGCCAGGCTCT  111
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  TGAGTCTGGGCCCCAGGACCCGCGTGCAGGCAGGGCCCTTCCCCAAACCCACCCTCTGGGCTGAGCCAGGCTCT  222

Query  112  GTGATCAGCTGGGGGAGCCCCGTGACCATCTGGTGTCAGGGGAGCCTGGAGGCCCAGGAGTACCGACTGGATAA  185
            ||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||.||||
Sbjct  223  GTGATCAGCTGGGGGAGCCCCGTGACCATCTGGTGTCAGGGGAGCCAGGAGGCCCAGGAGTACCGACTGCATAA  296

Query  186  AGAGGGAAGCCCAGAGCCCTTGGACAGAAATAACCCACTGGAACCCAAGAACAAGGCCAGATTCTCCATCCCAT  259
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  AGAGGGAAGCCCAGAGCCCTTGGACAGAAATAACCCACTGGAACCCAAGAACAAGGCCAGATTCTCCATCCCAT  370

Query  260  CCATGACAGAGCACCATGCGGGGAGATACCGCTGCCACTATTACAGCTCTGCAGGCTGGTCAGAGCCCAGCGAC  333
            |||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  CCATGACAGAGCACCATGCAGGGAGATACCGCTGCCACTATTACAGCTCTGCAGGCTGGTCAGAGCCCAGCGAC  444

Query  334  CCCCTGGAGCTGGTGATGACAGGATTCTACAACAAACCCACCCTCTCAGCCCTGCCCAGCCCTGTGGTGGCCTC  407
            |||||||||.||||||||||||||..|||||.||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  CCCCTGGAGATGGTGATGACAGGAGCCTACAGCAAACCCACCCTCTCAGCCCTGCCCAGCCCTGTGGTGGCCTC  518

Query  408  AGGGGGGAATATGACCCTCCGATGTGGCTCACAGAAGGGATATCACCATTTTGTTCTGATGAAGGAAGGAGAAC  481
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  AGGGGGGAATATGACCCTCCGATGTGGCTCACAGAAGGGATATCACCATTTTGTTCTGATGAAGGAAGGAGAAC  592

Query  482  ACCAGCTCCCCCGGACCCTGGACTCACAGCAGCTCCACAGTGGGGGGTTCCAGGCCCTGTTCCCTGTGGGCCCC  555
            |||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||
Sbjct  593  ACCAGCTCCCCCGGACCCTGGACTCACAGCAGCTCCACAGTCGGGGGTTCCAGGCCCTGTTCCCTGTGGGCCCC  666

Query  556  GTGAACCCCAGCCACAGGTGGAGGTTCACATGCTATTACTATTATATGAACACCCCCCAGGTGTGGTCCCACCC  629
            ||||.|||||||||||||||||||||||||||||||||||||||||..|||||||||..|||||||||||||||
Sbjct  667  GTGACCCCCAGCCACAGGTGGAGGTTCACATGCTATTACTATTATACAAACACCCCCTGGGTGTGGTCCCACCC  740

Query  630  CAGTGACCCCCTGGAGATTCTGCCCTCAGGCGTGTCTAGGAAGCCCTCCCTCCTGACCCTGCAGGGCCCTGTCC  703
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  CAGTGACCCCCTGGAGATTCTGCCCTCAGGCGTGTCTAGGAAGCCCTCCCTCCTGACCCTGCAGGGCCCTGTCC  814

Query  704  TGGCCCCTGGGCAGAGCCTGACCCTCCAGTGTGGCTCTGATGTCGGCTACGACAGATTTGTTCTGTATAAGGAG  777
            ||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||
Sbjct  815  TGGCCCCTGGGCAGAGCCTGACCCTCCAGTGTGGCTCTGATGTCGGCTACAACAGATTTGTTCTGTATAAGGAG  888

Query  778  GGGGAACGTGACTTCCTCCAGCGCCCTGGCCAGCAGCCCCAGGCTGGGCTCTCCCAGGCCAACTTCACCCTGGG  851
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  GGGGAACGTGACTTCCTCCAGCGCCCTGGCCAGCAGCCCCAGGCTGGGCTCTCCCAGGCCAACTTCACCCTGGG  962

Query  852  CCCTGTGAGCCGCTCCCACGGGGGCCAGTACAGGTGCTATGGTGCACACAACCTCTCCTCCGAGTGGTCGGCCC  925
            |||||||||||.||||.|.||||||||||||||||||||.||||||||||||||||||||||||||||||||||
Sbjct  963  CCCTGTGAGCCCCTCCAATGGGGGCCAGTACAGGTGCTACGGTGCACACAACCTCTCCTCCGAGTGGTCGGCCC  1036

Query  926  CCAGCGACCCCCTGAACATCCTGATGGCAGGACAGATCTATGACACCGTCTCCCTGTCAGCACAGCCGGGCCCC  999
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  CCAGCGACCCCCTGAACATCCTGATGGCAGGACAGATCTATGACACCGTCTCCCTGTCAGCACAGCCGGGCCCC  1110

Query 1000  ACAGTGGCCTCAGGAGAGAACGTGACCCTGCTGTGTCAGTCATGGTGGCAGTTTGACACTTTCCTTCTGACCAA  1073
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  ACAGTGGCCTCAGGAGAGAACGTGACCCTGCTGTGTCAGTCATGGTGGCAGTTTGACACTTTCCTTCTGACCAA  1184

Query 1074  AGAAGGGGCAGCCCATCCCCCACTGCGTCTGAGATCAATGTACGGAGCTCATAAGTACCAGGCTGAATTCCCCA  1147
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  AGAAGGGGCAGCCCATCCCCCACTGCGTCTGAGATCAATGTACGGAGCTCATAAGTACCAGGCTGAATTCCCCA  1258

Query 1148  TGAGTCCTGTGACCTCAGCCCACGCGGGGACCTACAGGTGCTACGGCTCATACAGCTCCAACCCCCACCTGCTG  1221
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  TGAGTCCTGTGACCTCAGCCCACGCGGGGACCTACAGGTGCTACGGCTCATACAGCTCCAACCCCCACCTGCTG  1332

Query 1222  TCTTTCCCCAGTGAGCCCCTGGAACTCATGGTCTCAGGACACTCTGGAGGCTCCAGCCTCCCACCCACAGGGCC  1295
            |||..||||||||||||||||||.|||.||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  TCTCACCCCAGTGAGCCCCTGGAGCTCGTGGTCTCAGGACACTCTGGAGGCTCCAGCCTCCCACCCACAGGGCC  1406

Query 1296  GCCCTCCACACCTGGTCTGGGAAGATACCTGGAGGTTTTGATTGGGGTCTCGGTGGCCTTCGTCCTGCTGCTCT  1369
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  GCCCTCCACACCTGGTCTGGGAAGATACCTGGAGGTTTTGATTGGGGTCTCGGTGGCCTTCGTCCTGCTGCTCT  1480

Query 1370  TCCTCCTCCTCTTCCTCCTCCTCCGACGTCAGCGTCACAGCAAACACAGGACATCT------------------  1425
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||                  
Sbjct 1481  TCCTCCTCCTCTTCCTCCTCCTCCGACGTCAGCGTCACAGCAAACACAGGACATCTGGGCTGAGACTCTGTCCA  1554

Query 1426  ----------GACCAGAGAAAGACTGATTTCCAGCGTCCTGCAGGGGCTGCGGAGACAGAGCCCAAGGACAGGG  1489
                      ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  TCTTCACCCAGACCAGAGAAAGACTGATTTCCAGCGTCCTGCAGGGGCTGCGGAGACAGAGCCCAAGGACAGGG  1628

Query 1490  GCCTGCTGAGGAGGTCCAGCCCAGCTGCTGACGTCCAGGAAGAAAACCTCTATGCTGCCGTGAAGGACACACAG  1563
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  GCCTGCTGAGGAGGTCCAGCCCAGCTGCTGACGTCCAGGAAGAAAACCTCTATGCTGCCGTGAAGGACACACAG  1702

Query 1564  TCTGAGGACAGGGTGGAGCTGGACAGTCAGAGCCCACACGATGAAGACCCCCAGGCAGTGACGTATGCCCCGGT  1637
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703  TCTGAGGACAGGGTGGAGCTGGACAGTCAGAGCCCACACGATGAAGACCCCCAGGCAGTGACGTATGCCCCGGT  1776

Query 1638  GAAACACTCCAGTCCTAGGAGAGAAATGGCCTCTCCTCCCTCCTCACTGTCTGGGGAATTCCTGGACACAAAGG  1711
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777  GAAACACTCCAGTCCTAGGAGAGAAATGGCCTCTCCTCCCTCCTCACTGTCTGGGGAATTCCTGGACACAAAGG  1850

Query 1712  ACAGACAGGTGGAAGAGGACAGGCAGATGGACACTGAGGCTGCTGCATCTGAAGCCTCCCAGGATGTGACCTAC  1785
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851  ACAGACAGGTGGAAGAGGACAGGCAGATGGACACTGAGGCTGCTGCATCTGAAGCCTCCCAGGATGTGACCTAC  1924

Query 1786  GCCCAGCTGCACAGCTTGACCCTTAGACGGAAGGCAACTGAGCCTCCTCCATCCCAGGAAGGGGAACCTCCAGC  1859
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925  GCCCAGCTGCACAGCTTGACCCTTAGACGGAAGGCAACTGAGCCTCCTCCATCCCAGGAAGGGGAACCTCCAGC  1998

Query 1860  TGAGCCCAGCATCTACGCCACTCTGGCCATCCAC----------------------------------------  1893
            ||||||||||||||||||||||||||||||||||                                        
Sbjct 1999  TGAGCCCAGCATCTACGCCACTCTGGCCATCCACTAGCCCGGGGGGTACGCAGACCCCACACTCAGCAGAAGGA  2072

Query 1894  --------------------------------------------------------------------------  1893
                                                                                      
Sbjct 2073  GACTCAGGACTGCTGAAGGCACGGGAGCTGCCCCCAGTGGACACCAGTGAACCCCAGTCAGCCTGGACCCCTAA  2146

Query 1894  --------------------------------------------------------------------------  1893
                                                                                      
Sbjct 2147  CACAGACCATGAGGAGACGCTGGGAACTTGTGGGACTCACCTGACTCAAAGATGACTAATATCGTCCCATTTTG  2220

Query 1894  -------------------------------------------  1893
                                                       
Sbjct 2221  GAAATAAAGCAACAGACTTCTCAACAATCAATGAGTTAATAAC  2263

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