Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11616
- Subject:
- NM_001164539.2
- Aligned Length:
- 2269
- Identities:
- 171
- Gaps:
- 2075
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGCCAGGCGGGGGTCCTCAGGGCGCCCCAGCCGCCGCCGGCGGCGGCGGCGTGAGCCACCGCGCAGGCAGCCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGATTGCTTACCACCTGCAGCGTGCTTTCGGAGGCGGCGGCTGGCACGGAGGCCGGGCTACATGAGAAGCTCGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CAGGGCCTGGGATCGGGTTCCTTTCCCCAGCAGTGGGCACACTGTTCCGGTTCCCAGGAGGGGTGTCTGGCGAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GAGTCCCACCACTCGGAGTCCAGGGCCAGACAGTGTGGCCTTGACTCGAGAGGCCTCTTGGTCCGGAGCCCTGT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TTCCAAGAGTGCAGCAGCCCCTACTGTGACCTCTGTGAGAGGAACCTCGGCGCACTTTGGGATTCAGCTCAGAG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GTGGCACCAGATTGCCTGACAGGCTTAGCTGGCCGTGTGGCCCTGGGAGTGCTGGGTGGCAGCAAGAGTTTGCA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GCCATGGATAGTTCTGAGACCCTGGACGCCAGCTGGGAGGCAGCCTGCAGCGATGGAGCAAGGCGTGTCCGGGC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AGCAGGCTCTCTGCCATCAGCAGAGTTGAGTAGCAACAGCTGCAGCCCTGGCTGTGGCCCTGAGGTCCCCCCAA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CCCCTCCTGGCTCTCACAGTGCCTTTACCTCAAGCTTTAGCTTTATTCGGCTCTCGCTTGGCTCTGCCGGGGAA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CGTGGAGAAGCAGAAGGCTGCCCACCATCCAGAGAGGCTGAGTCCCATTGCCAGAGCCCCCAGGAGATGGGAGC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CAAAGCTGCCAGCTTGGACGGGCCTCACGAGGACCCGCGATGTCTCTCTCGGCCCTTCAGTCTCTTGGCTACAC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GGGTCTCTGCAGACTTGGCCCAGGCCGCAAGGAACAGCTCCAGGCCAGAGCGTGACATGCATTCTTTACCAGAC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ATGGACCCTGGCTCCTCCAGTTCTCTGGATCCCTCACTGGCTGGCTGTGGTGGTGATGGGAGCAGCGGCTCAGG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GGATGCCCACTCTTGGGACACCCTGCTCAGGAAATGGGAGCCAGTGCTGCGGGACTGCCTGCTGAGAAACCGGA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GGCAGATGGAGGTAATATCCTTAAGATTAAAACTTCAGAAACTTCAGGAAGATGCAGTTGAGAATGATGATTAT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GATAAAGCTGAGACGTTACAACAAAGATTAGAAGACCTGGAACAAGAGAAAATCAGCCTGCACTTTCAACTTCC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TTCAAGGCAGCCAGCTCTTAGCAGTTTCCTGGGTCACCTGGCAGCACAAGTCCAGGCTGCCTTGCGCCGTGGGG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CCACTCAGCAGGCCAGCGGAGATGACACCCACACCCCACTGAGAATGGAGCCGAGGCTGTTGGAACCCACTGCT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CAGGACAGCTTGCACGTGTCCATCACGAGACGAGACTGGCTTCTTCAGGAAAAGCAGCAGCTACAGAAAGAAAT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CGAAGCTCTCCAAGCAAGGATGTTTGTGCTGGAAGCCAAAGATCAACAGCTGAGAAGGGAAATAGAGGAGCAAG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AGCAGCAACTCCAGTGGCAGGGCTGCGACCTGACCCCACTGGTGGGCCAGCTGTCCCTGGGTCAGCTGCAGGAG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GTCAGCAAGGCCTTGCAGGACACCCTGGCCTCAGCCGGTCAGATTCCCTTCCATGCAGAGCCACCGGAAACCAT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 AAGGAGCCTCCAGGAAAGAATAAAATCCCTCAACTTGTCACTTAAAGAAATCACTACTAAGGTGTGTATGAGTG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 AGAAATTCTGCAGCACCCTGAGGAAGAAAGTTAACGATATTGAAACCCAACTACCAGCCTTGCTTGAAGCCAAA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 ATGCATGCCATATCAGGAAACCATTTCTGGACGGCTAAAGACCTCACCGAGGAGATTAGATCATTAACATCAGA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GAGAGAAGGGCTGGAGGGACTCCTCAGCAAGCTGTTGGTGTTGAGTTCCAGGAATGTCAAAAAGCTGGGAAGTG 1924
Query 1 ---------------------------------------------------------ATGGAGTCTCACTCTGT 17
|||||||||||||||||
Sbjct 1925 TTAAAGAAGATTACAACAGACTGAGAAGAGAAGTGGAGCACCAGGAGACTGCCTATGATGGAGTCTCACTCTGT 1998
Query 18 CACCCAGGCTGGAGTGCAGTGGCGTGATCTTGGCTCACTGCAACCTCTGCCTCCTGGGTTCAAGCAATTCTCCC 91
|.|||||.||||||||||||||...|||||| ||||||||||||||||||||||.|.||||||||||||||||.
Sbjct 1999 CGCCCAGTCTGGAGTGCAGTGGTACGATCTT-GCTCACTGCAACCTCTGCCTCCCGAGTTCAAGCAATTCTCCT 2071
Query 92 ACCTCAGCCTCCCAAGTAGCTGGGATTACAGACGTG--TGCCACCATACCTGGGTAATTTTTGCATTTTTAGTG 163
.|||||||||||..||||||||||||||||| ||| .||||||||.|||||.||| |||||.|||.|||||.
Sbjct 2072 GCCTCAGCCTCCGGAGTAGCTGGGATTACAG--GTGCCCGCCACCATGCCTGGCTAA-TTTTGTATTCTTAGTA 2142
Query 164 GAGAGGGAGTTTCACCATGTTGGCCAGGTTGGTCT--------------------------------------- 198
||||.||.||||.|||||||||.||||..||||||
Sbjct 2143 GAGATGGGGTTTTACCATGTTGACCAGACTGGTCTAAAACTCCTGACCTCAAGTGATCCACCTTCCTCAGCCTC 2216
Query 199 ------------------------------------------------- 198
Sbjct 2217 CCAAAGTGCTGGGATTACAGACATGAGCCACTGTGCCTGGCCCCTACAA 2265
