Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11616
- Subject:
- NR_040046.1
- Aligned Length:
- 3317
- Identities:
- 168
- Gaps:
- 3124
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATCAGCTAGCAAGTATTCACAGGCACATCCAACCTCCATCCTTACATTCCACAAGGATTTGAGTGTCTGTTATA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGTATAAAAGCCTGCCGTTGGTGGAAAAGGAAAAGGTGGTCCAGTTAGACAAGATGCCACCGGCTTCTGAAACC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGACATCTTTGAAAACCCACCCATCTACCTGCAGGAAAAGGCAAGGGACCTGACCTCGCCTGGGCTCAGGGAAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AGGTTGCTGGGATCATAACCCCAGGAAGAGACGGGATGGAAGGAGAGCATGCAGGGAGCAGAGGACAGGCTACT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CTCCAAGGAGGAGAGGGAAGAGGCCACAGAAATGGAAAAGGGGCCAGGACAAGTCAGTGGAGAGATGGTCAGGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CCTGGCGAGGAGGAGCAGGACAAAAGCGGTGGAGCTCAGCCCCGTGGCGGCAGGGCCACTCCCATTCATCTGGT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CCTCTACTTCTGAAGTTCTCGAATGCAGAATGAGATGTACAGATGGGCCAGCAGGTGATATGCTATCTGTCATA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GGTTAAGGCCTCATTATTTTATTCATTTTTAAACTTTTTTTTTTTTGAGACAGGGTCTTGTTCTGTCGCCCAGG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CTGGTTTGCAGTGGTGCCACCATGGTTCACTGTAACCTTGAAGCCCCTGGGCTCAAGTGATCCTCCTGCCTCAG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CCTCCAGAGTAACGAGGACTACAGGTGCACACCGCCATGCCCAGCTAATTTCTTAACGTTTTGTAGAGAAAGGC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TCTCACTGTGTTGCCCAGGCTGGTCTTGAACTCCTTGACTCAAGCAATCCTCCTGTCTTGGCTTCCCAAAGTGT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TGGGATTACAGGTGTGAGCCACTGCTCCCAGCCACAAGTTTTATTTTAAATGTTTACCTTTCAATGATCACTTC 888
Query 1 ------------------------------------------ATGGAGTCTCACTCTGTCACCCAGGCTGGAGT 32
|||||||||..||.||||..||||||||||||
Sbjct 889 GAGGAGATTTAAGCTTACTCTTTCTTTTTTTTTTTTCTTGAGATGGAGTCTTGCTGTGTCGTCCAGGCTGGAGT 962
Query 33 GCAGTGGCGTGATCTTGGCTCACTGCAACCTCTGCCTCCTGGGTTCAAGCAATTCTCCCACCTCAGCCTCCCAA 106
|||||||.|..||||||||||||||||||||||||.|||..||||||||..|||||||.|||||||||||||.|
Sbjct 963 GCAGTGGTGCTATCTTGGCTCACTGCAACCTCTGCTTCCCAGGTTCAAGTGATTCTCCTACCTCAGCCTCCCGA 1036
Query 107 GTAGCTGGGATTACAGACGTGTGCCACCA-----TACCTGGGTAATTTTTGCATTTTTAGTGGAGAGGGAGTTT 175
|||||||.||.|||||.|.|||||||||| ||| |||||||||.|||||||||.|||..||.||||
Sbjct 1037 GTAGCTGAGACTACAGGCATGTGCCACCACTCCCTAC-----TAATTTTTGTATTTTTAGTAGAGTCGGGGTTT 1105
Query 176 CACCATGTTGGCCAGGTTGGTCT--------------------------------------------------- 198
|||||||||.|||||||||||||
Sbjct 1106 CACCATGTTAGCCAGGTTGGTCTCGAACTCCTGACCTAAAGTGATCTGCCTGCCTCAGCCTCCCAAAGTGCTGG 1179
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1180 GAGGCATGAGCCACCATGCCTGGCTCATTGTCTAGTTTTTACCAAGAAGATGATGAGATATGCCAGAGGGCTCC 1253
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1254 GTATCTGCTATGAGAACGTCCCCCAAGAGCAGCTGGCCGTGGTGCTGCAGCTGGAGCTGTGCTTGGAGCTCTTC 1327
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1328 TTCACCCCCATGGCGGTCACCACCTTCTGCCACTGGCACTTTGTGCAGATCATGCTCTCTGGCCCCAAGTGGGG 1401
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1402 ACCTGGAGGTGCTGAAGAGCCAAGAGACTGGCTGCCGTGACCCTCTTCAACTTCCTGGTCTGCTTGGACCCTGT 1475
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1476 GCTTTGTCTCCCATGGTGGGTTCCCCCAGTGGAAGAGTCAAATTGGTGGGCAGGCGCAGTGTTGTTCAGTGCTC 1549
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1550 TCGATGCTGCATTGACCCCTTGATTTTCTTTGTTTTTGTTTTTATTTTGTTTTGTTTTGTTTTTGAGATGGAGT 1623
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1624 CTTGCTCTGTCACCCAGGCTGGAGTGCAGTGGTGTGATGATCTTGGCTCACTGCAACCTCCGCCTCCTGGGTTC 1697
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1698 TCCTGCCTCAGCCTCCCGGGTAGCTGGGATTACAGGCACCCACCACCACACCCGGCTAATTTTTGTATTTTTAG 1771
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1772 TAGAGACGAGGTTTCAACCCCTACTCAGGCTGGTGTCAAACTCCTGACCGCAAGTGATCTGCCCACCTTGGCCT 1845
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1846 CCCAAAGTGTTGCAATTACAGGCGTGAGCCACCATGCCCAGCCTAACCCCTTGATTTTCTGTTTCTCTTCCTCC 1919
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1920 ACCGTGCGCAAAGCCTTTGACAGAGGGCCACGGAGGTGGCAGCACGGCGGGGGTCTCACTGTCTGGGTGGTGGT 1993
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1994 GAAAGCTCTGGAGAGCCAGCTGCAGAGAGAAGATGTGGATCTTAGGGACGGCCAATGTCACCTTCACAGGAGAT 2067
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2068 TAGAGGCGCCAGCTTGGGGTAACCTTTTGGGGAAGGAGGGCTCAAAAAGAGGAACAATGAAACAGAACTAAGGT 2141
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2142 GAGTTCTCCTGTGCCCAGTTTCAGAGGTCAAGGAGAGTAGTAGATAGCTCAAACCCAACTCAGCCATTGAGTGA 2215
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2216 GTGTTTTCATTTTGTTCCTTGGGGTCTATGATATTTTCTATTTTCTTTTCTTTCCTTTTGTTTTGGTTTGTTTG 2289
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2290 TTTGTTTGGTTGGTTGGTTGGTTGGTTGGTTTTAGAGACAGGGTTTCCCTCTGTCACCCAGGCTGGAATGCAGT 2363
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2364 AGTGTGATCACATCACACTGCAGCTTCTAACTCATGGGTTCAAGCCATCCTCCTGCCTCAGCCTCCTGAGTAGC 2437
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2438 TGGGACTCCAGGTGCACGCCACCATGGCCGGCTAATTGTTTATTTTTTATAGAGACAGGGTTTCACTATGTTGG 2511
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2512 CCAGGATGTTCAACAACTTCTGCCTTCAAGCGATCTTCCCTCCTGGGCCTCCCCAAGTGCTGAGTTTACAAGCA 2585
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2586 TCAGCCACCACACCCAGCCTATGACATTTTCTTCATTATGGCTGGTACTGCCTCATGAAAAGGGGGTTCCTCAT 2659
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2660 GCTGGATCTGAACAACCCAGCACAGGCAAGTCTGGGGAGCAAGGCAGGAGCCTGCATGTGGACTCAAAGGACCG 2733
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2734 GCACCCGAAACAAAGCAGTGGCTGGCACAGGTGGACAAACCAGGCAAGAAAAGCAACTGTCCTTCGGAGCAGAG 2807
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2808 TCCACGTGATGGGAAGAAACAGACACAGTCTCACTCTGTTGCCCAGGCTGAAGTCAACGGCATGATCTCAGCTC 2881
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2882 ACTGCAACCTCCACCTCCTGGGTTCAAGCAATTCTCGTGCCTCAGCCTCCCAAGTAGCTTGGATTACAGTAAAA 2955
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2956 GCTGCCAAGGTCCTCTTCAACGTGATGGCGTAAATCCAGCTCTTTCTGCAAGAAGGCTCACCAGCCTTCCCACC 3029
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3030 AGCTCTTCTCCCCACCCCAGCCCTGCAGCCCTGCAGCCTGACCCTAGGTAATGAGTGGTGGGGAGTGACCCAGG 3103
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3104 CATGCACGACCTGCCCAGAGGAAAGGGAGTTCAAAGAAGGACCCGAGACCCTCACAGGAACCTAGCAGATTGGC 3177
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3178 ACAAGTGCCAGATGTATCCAGGACAGACACTTTCCCCAGGACTCCAGGGGTAAAGGAGTGCCCCACCTCTCCAC 3251
Query 199 ------------------------------------------------------------- 198
Sbjct 3252 TCCTTGCCTTTCTTAACTGAATTCAGATTGTCGTGAACATTCAAGAAAAGCATTGTGGCTG 3312
