Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_11616
Subject:
NR_103831.1
Aligned Length:
2850
Identities:
172
Gaps:
2652

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AGTGCAAACCAGTCCGGCTGCTTTAGAAACAAGTTGTTTTCTGCTTCCAGAACCACCCAGGAGCCTGCGTGATG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TCTCTTCCCCCACCCGACCCCCTCTTCCCTCTGCCGGTCTCCTTGCTCCAGGATCTGCACAAGCAGAGGCGGCA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CAGGGTTTGGCTTCCAGTTGGGAAATGAAGCTCCAAGGGCAGCCCTACTATGGCGGGCTGTGTGACCTGGGCCA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  AGCCCCTTGACATCTCCAGACTCGGCTTCCACATCTGCCACCACCAGGACACTGGATTGAATGTTGGGTACGTT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GTAAGGCAAGGGAGACACAGAAGTCCTAAAGGCAATAAAGCTTTTCCCCACTGCCCCTCCATCTGGACGAGTCT  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  CCTGCCAAGCATCTTCAAGTCCCACTTTGAAACACGATTCTGCCACCTTCCTGTTCTGAGGATCTGGGAAAGCA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  AGGGGGAAGGGGCTATTGGGAGTCCCGCTTGCTCCAGGCCCAGACCAGGAGGCTCAGGCAGGCTTATCTACTTC  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  TGATGTGGTGGGGGGCCCAGGATGCTGCCAGGGTCTCACAGCCATGGTCTCACAGCCACTATCAGCCTGTCCTC  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  AAGGGTATAAGAGAAGCTGGAAGCCTAGATGGGCACTGCCCTCAGGCAACTTCCAATCCAGCCAAGAAGAATAA  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  AGAGTAACACACAAAATATTGGGGGCATGAGGCAATAACTGTGGGTACACCTATAAAAACCTCTAATTGGGCTT  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  ACCTGGTACCAGACAGTATTTTAATTGGATCATATATAGTGCATTAATTCAGTTAATATTCACAACACCCCTAT  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  GAGGTAGCTACAATTATTATCCCCATTCGATGATGGGGAAAACTGACATCAGAAGAGGTCAACTTGCCCAAGTT  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  TCCAGAGCTGAAAAGCAACAGAGCTGAGATTTCACTGCAGGTATTCTGGCCCCAGAGTCTTGGTACAAATAGTG  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  TTAATGAACAAGTCTTCTTCTGGTAAGAGCACCCCAATTTTCCTTTGGAGAACCTCCACTTCCTCATTTCATGT  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  GCCATGGGTGACCCTACCCTTGAGCTCTTGAGGTGAACACATGGACACACGATCCAGTCCTGACCAAACAGAAT  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  ATCTCACTTCCCTGGCTACAGTTAGTGATAGGTTCAGGATTGTAGCAATGACCCAAGACTGGCTTCTGAGAGTC  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  ACATTTGAGACTGTGGCTCAAACTCTTAGAGAAGCACTCGTTTTTCAACTGAGACACTACAGTCTTTACTACTC  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  CTTGAAGACGGACTACCAGGAAGAAAGCCAACCTAGAGGGCTGCAAAGCTGAGCAGTGGAGAACAGCAAGTTCC  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  TGATGACATTGTTTGATGGCCTAAACCCCATTATACTTCCACTGGTTATCTCCCTGGACTTTCCTGTTACACAG  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  AAATTATCCCTTTTGTGTTGAAGCCAATTTGAATTGGATATCTGTCACTTACAACCAAAAAGGTCCAAATGTGC  1480

Query    1  --------------------------------------------------------------------ATGGAG  6
                                                                                |..|||
Sbjct 1481  TAGTGAACACAGAGCACATACTGTGAGCAACTACTCTTTTTCTTCTTTCTTTCTTTCTTTTTTCTGAGACAGAG  1554

Query    7  TCTCACTCTGTCACCCAGGCTGGAGTGCAGTGGCGTGATCTTGGCTCACTGCAACCTCTGCCTCCTGGGTTCAA  80
            |||..||||||||||||||||||||||||||||.|..||||.||||||||||||||||||||||||||||||||
Sbjct 1555  TCTTTCTCTGTCACCCAGGCTGGAGTGCAGTGGTGCAATCTCGGCTCACTGCAACCTCTGCCTCCTGGGTTCAA  1628

Query   81  GCAATTCTCCCACCTCAGCCTCCCAAGTAGCTGGGATTACAGACGTGTGCCACCATACCTGGGTAATTTTTGCA  154
            |..|||||||..||||||||||||.||||||||||||||.||||..|||||||||..||.||.|||||||||.|
Sbjct 1629  GTGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTATAGACACGTGCCACCACGCCCGGCTAATTTTTGTA  1702

Query  155  TTTTTAGTGGAGAGGGAGTTTCACCATGTTGGCCAGGTTGGTCT------------------------------  198
            ||.|||||.||||.||.||||||||||||||||||||.||||||                              
Sbjct 1703  TTCTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTTGTGATCTGCCCACCT  1776

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1777  CGGCCTCCTAAAGTGCTGGGATTACAGGTGTGAGCCACCGCGCCCGGCCCGAGCACCTAAGCTTTTCAAGACAT  1850

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1851  TTCCAGAAAAACAAATGCAGGTAAGAAAGGATCAGTCTTCAAAGAACTTGGAAGCTGGTGAGGGATTACAAAGA  1924

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1925  TTCTCAAATAACTTTAAAACAAGTCAGAACACAATTGACAGCACAAGGCAGCTACCCGGGTTCTCTGGTTAATG  1998

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1999  CAAAGGGTGAGAATTTTCTATATTGGATGGAACACATCAGAAAAGTTCTCACGAAGGTGGTAGCAGTGAAATTG  2072

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2073  GCCTCAGAAGTCTGATAGGATGTTGGCAGGTGAAGGCAGGGAAGCTACAGGGCAGACAGCATGAGGAAGGGCCC  2146

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2147  AGGTTCAGGGAAGTATGGGCATGCAGGGGCAAGTGTAAATTGATGGGATTGCCTGGGACCAGAGGAAAGGTCTA  2220

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2221  AAACGTACAGTCTGAGGCTGGGGCGGGGTGGGGAAAGGATGGTTCTGAGGTATCTGAAGTATCTCCAAATATCT  2294

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2295  GAAGATATTCCCCATGGAAAAGAAACTAGGCTTATTTGGAGTGACCCCAGAGGACAAGACTACGACTAAAAATG  2368

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2369  GACGCTCGCAAATGGAGGAAGTAGACCTGACCCCTGACTAAGGAAGATGGTGCTACCTGTTTGGGGCAAATGTT  2442

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2443  CAAAAAGAGGCTGTGTCTGTATGGTGGATGCTGTTAAAAGGGACTCAGAAACCAAATGAGAGTCTGAATTAGCT  2516

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2517  GAGTTTAACATTCTGTGAGTTTTGTGCCAGACTTGGGACTACTGCAGAAGACCCTGGGAGAGTTGGGATTGAAT  2590

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2591  TCCAAAGGCAGTGCTGATGGACACTGACTTGAGGAGCCAGGAAAGAAGGCAGGAACAGTGGTGGGGATCACAGC  2664

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2665  CTCACCTGTATCTGTGCACTTCTATAAATTCACAGACTGGGAATTTTTAATGTGAACTGGATATTAGATGATGA  2738

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2739  CCAGGAATTGTTTTAATTCTGTTAGGTGGGATAATACCATTCACTGTGCTGTGTAAGATAATGTCCATATTGTT  2812

Query  199  --------------------------------------  198
                                                  
Sbjct 2813  TAGAGATGCATACTGAAGAATATAGGATGAAATGACAT  2850

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