Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11616
- Subject:
- NR_103831.1
- Aligned Length:
- 2850
- Identities:
- 172
- Gaps:
- 2652
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGTGCAAACCAGTCCGGCTGCTTTAGAAACAAGTTGTTTTCTGCTTCCAGAACCACCCAGGAGCCTGCGTGATG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCTCTTCCCCCACCCGACCCCCTCTTCCCTCTGCCGGTCTCCTTGCTCCAGGATCTGCACAAGCAGAGGCGGCA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CAGGGTTTGGCTTCCAGTTGGGAAATGAAGCTCCAAGGGCAGCCCTACTATGGCGGGCTGTGTGACCTGGGCCA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AGCCCCTTGACATCTCCAGACTCGGCTTCCACATCTGCCACCACCAGGACACTGGATTGAATGTTGGGTACGTT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GTAAGGCAAGGGAGACACAGAAGTCCTAAAGGCAATAAAGCTTTTCCCCACTGCCCCTCCATCTGGACGAGTCT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CCTGCCAAGCATCTTCAAGTCCCACTTTGAAACACGATTCTGCCACCTTCCTGTTCTGAGGATCTGGGAAAGCA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AGGGGGAAGGGGCTATTGGGAGTCCCGCTTGCTCCAGGCCCAGACCAGGAGGCTCAGGCAGGCTTATCTACTTC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TGATGTGGTGGGGGGCCCAGGATGCTGCCAGGGTCTCACAGCCATGGTCTCACAGCCACTATCAGCCTGTCCTC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AAGGGTATAAGAGAAGCTGGAAGCCTAGATGGGCACTGCCCTCAGGCAACTTCCAATCCAGCCAAGAAGAATAA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AGAGTAACACACAAAATATTGGGGGCATGAGGCAATAACTGTGGGTACACCTATAAAAACCTCTAATTGGGCTT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 ACCTGGTACCAGACAGTATTTTAATTGGATCATATATAGTGCATTAATTCAGTTAATATTCACAACACCCCTAT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GAGGTAGCTACAATTATTATCCCCATTCGATGATGGGGAAAACTGACATCAGAAGAGGTCAACTTGCCCAAGTT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TCCAGAGCTGAAAAGCAACAGAGCTGAGATTTCACTGCAGGTATTCTGGCCCCAGAGTCTTGGTACAAATAGTG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TTAATGAACAAGTCTTCTTCTGGTAAGAGCACCCCAATTTTCCTTTGGAGAACCTCCACTTCCTCATTTCATGT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GCCATGGGTGACCCTACCCTTGAGCTCTTGAGGTGAACACATGGACACACGATCCAGTCCTGACCAAACAGAAT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 ATCTCACTTCCCTGGCTACAGTTAGTGATAGGTTCAGGATTGTAGCAATGACCCAAGACTGGCTTCTGAGAGTC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 ACATTTGAGACTGTGGCTCAAACTCTTAGAGAAGCACTCGTTTTTCAACTGAGACACTACAGTCTTTACTACTC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CTTGAAGACGGACTACCAGGAAGAAAGCCAACCTAGAGGGCTGCAAAGCTGAGCAGTGGAGAACAGCAAGTTCC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TGATGACATTGTTTGATGGCCTAAACCCCATTATACTTCCACTGGTTATCTCCCTGGACTTTCCTGTTACACAG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 AAATTATCCCTTTTGTGTTGAAGCCAATTTGAATTGGATATCTGTCACTTACAACCAAAAAGGTCCAAATGTGC 1480
Query 1 --------------------------------------------------------------------ATGGAG 6
|..|||
Sbjct 1481 TAGTGAACACAGAGCACATACTGTGAGCAACTACTCTTTTTCTTCTTTCTTTCTTTCTTTTTTCTGAGACAGAG 1554
Query 7 TCTCACTCTGTCACCCAGGCTGGAGTGCAGTGGCGTGATCTTGGCTCACTGCAACCTCTGCCTCCTGGGTTCAA 80
|||..||||||||||||||||||||||||||||.|..||||.||||||||||||||||||||||||||||||||
Sbjct 1555 TCTTTCTCTGTCACCCAGGCTGGAGTGCAGTGGTGCAATCTCGGCTCACTGCAACCTCTGCCTCCTGGGTTCAA 1628
Query 81 GCAATTCTCCCACCTCAGCCTCCCAAGTAGCTGGGATTACAGACGTGTGCCACCATACCTGGGTAATTTTTGCA 154
|..|||||||..||||||||||||.||||||||||||||.||||..|||||||||..||.||.|||||||||.|
Sbjct 1629 GTGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTATAGACACGTGCCACCACGCCCGGCTAATTTTTGTA 1702
Query 155 TTTTTAGTGGAGAGGGAGTTTCACCATGTTGGCCAGGTTGGTCT------------------------------ 198
||.|||||.||||.||.||||||||||||||||||||.||||||
Sbjct 1703 TTCTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTTGTGATCTGCCCACCT 1776
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1777 CGGCCTCCTAAAGTGCTGGGATTACAGGTGTGAGCCACCGCGCCCGGCCCGAGCACCTAAGCTTTTCAAGACAT 1850
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1851 TTCCAGAAAAACAAATGCAGGTAAGAAAGGATCAGTCTTCAAAGAACTTGGAAGCTGGTGAGGGATTACAAAGA 1924
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1925 TTCTCAAATAACTTTAAAACAAGTCAGAACACAATTGACAGCACAAGGCAGCTACCCGGGTTCTCTGGTTAATG 1998
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1999 CAAAGGGTGAGAATTTTCTATATTGGATGGAACACATCAGAAAAGTTCTCACGAAGGTGGTAGCAGTGAAATTG 2072
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2073 GCCTCAGAAGTCTGATAGGATGTTGGCAGGTGAAGGCAGGGAAGCTACAGGGCAGACAGCATGAGGAAGGGCCC 2146
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2147 AGGTTCAGGGAAGTATGGGCATGCAGGGGCAAGTGTAAATTGATGGGATTGCCTGGGACCAGAGGAAAGGTCTA 2220
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2221 AAACGTACAGTCTGAGGCTGGGGCGGGGTGGGGAAAGGATGGTTCTGAGGTATCTGAAGTATCTCCAAATATCT 2294
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2295 GAAGATATTCCCCATGGAAAAGAAACTAGGCTTATTTGGAGTGACCCCAGAGGACAAGACTACGACTAAAAATG 2368
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2369 GACGCTCGCAAATGGAGGAAGTAGACCTGACCCCTGACTAAGGAAGATGGTGCTACCTGTTTGGGGCAAATGTT 2442
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2443 CAAAAAGAGGCTGTGTCTGTATGGTGGATGCTGTTAAAAGGGACTCAGAAACCAAATGAGAGTCTGAATTAGCT 2516
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2517 GAGTTTAACATTCTGTGAGTTTTGTGCCAGACTTGGGACTACTGCAGAAGACCCTGGGAGAGTTGGGATTGAAT 2590
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2591 TCCAAAGGCAGTGCTGATGGACACTGACTTGAGGAGCCAGGAAAGAAGGCAGGAACAGTGGTGGGGATCACAGC 2664
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2665 CTCACCTGTATCTGTGCACTTCTATAAATTCACAGACTGGGAATTTTTAATGTGAACTGGATATTAGATGATGA 2738
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2739 CCAGGAATTGTTTTAATTCTGTTAGGTGGGATAATACCATTCACTGTGCTGTGTAAGATAATGTCCATATTGTT 2812
Query 199 -------------------------------------- 198
Sbjct 2813 TAGAGATGCATACTGAAGAATATAGGATGAAATGACAT 2850
