Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11616
- Subject:
- NR_130946.1
- Aligned Length:
- 3202
- Identities:
- 173
- Gaps:
- 3004
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATCTCGCGAGAGCCGCGCGGCCCCCGAAGGCTCGCAGGCGGAAGTGAGACGCCGGAAGCGGTCGTTGCCATGGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCCTGGGGACGACTGGCTGGTGGAATCCTTGCGCTTGTAAATCGTACCAGGATTTCTATGCATTCGACCTGTCA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGAGCCACTCGAGTCCTTGAATGGATTGATGACAAAGGAGTCTTTGTTGCTGGCTATGAAAGCCTGAAAAAGAA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TGAAATTCTTCATCTGAAATTACCTCTCAGACTTTCTGTAAAGGAAAACAAGGGCTTATTCCCAGAAAGAGATT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TCAAAGTGCGCCATGGAGGATTTTCAGACAGGTCTATCTTTGATCTAAAGCATGTGCCACATACCAGATTGCTG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GTTACCAGTGGCCTTCCAGGTTGTTATCTGCAGGTGTGGCAGGTTGCAGAGGACAGTGATGTCATTAAAGCTGT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CAGCACCATTGCTGTGCATGAGAAAGAGGAGAGTCTCTGGCCTAGGGTGGCCGTCTTCTCCACATTGGCACCCG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GAGTCCTCCATGGGGCGAGGCTCCGAAGTCTGCAGGTCGTTGATCTGGAGTCCCGGAAGACCACGTACACCTCA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GATGTCAGTGACAGTGAGGAGCTGAGTAGCCTGCAGGTCCTAGATGCAGACACCTTTGCCTTCTGCTGTGCTTC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AGGCCGGCTGGGGCTTGTTGACACCCGGCAGAAGTGGGCACCGTTGGAGAATCGCAGCCCTGGCCCTGGGTCTG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GTGGAGAGAGATGGTGTGCTGAAGTTGGGAGCTGGGGCCAGGGCCCTGGGCCCAGCATTGCCAGCCTTGGCTCA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GATGGGCGTCTTTGTCTTCTTGACCCCCGGGATCTCTGCCATCCTGTGAGCTCAGTCCAGTGCCCAGTATCCGT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ACCTAGCCCTGACCCAGAGCTGCTGCGAGTGACTTGGGCCCCAGGCCTGAAGAATTGCTTGGCCATCTCAGGTT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TTGATGGTACAGTCCAGGTCTATGATGCCACATCTTGGGATGGAACACGGAGCCAAGATGGAACACGGAGCCAA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GTAGAACCTCTCTTCACTCACAGAGGTCACATCTTCCTAGATGGAAATGGGATGGACCCTGCTCCTTTGGTCAC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CACCCACACCTGGCATCCCTGCAGACCAAGGACTTTGTTATCAGCAACAAATGATGCCTCTCTGCATGTGTGGG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 ACTGGGTGGACCTTTGTGCCCCCCGCTGACACCAGCATCTTTCCATCTAGGCCTCTAGAAAGGGGAGGAGCTGC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TGTAGTAGCAAGGGTGCTCATGTAGGACTCAAGTGACTACCAGTCCCTGTTACCAGCTGTGTGGCCTTGGGCAA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GTCTGCCAGCGTCACTTAGCCTCAGTTTCCTTATCTGTAAAATGAGGATAGTAAGAACTACCTCGTAGTGATAT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TGCGAAGGTTAGAAGAAACGCATGGCATAATTACTTGGTAGCTATTGTTAGATCTGGGAGTGTGAAATGGTAGC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GTTTTGTCCCTGTCTTCACACTATCATAGGGAGAATCAAAAGAGCTAACAAATATAAACATGCTTTGTGAATTT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TTTTAAAGAAAAAAATGTAGAGGGGCCAATAAACATGAAAAAATCCCAGCCCTAGTAGCAATTAAGGAAATAGC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 AAAACAGGATTTCTGCTCCTCTTGAGTGGGTCTCATGGGAACACAGGTGCACTTTCCCACACTTGTCCCCCCAG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GTGACTAGGTTCAAGAGACATTTGCTTTTGGTGGCCCCACAAACATTTCCTTTTGAGGGCCCATAGTGAATATT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 AAAGTGTGCTGGACATGGTGGCTCATGCCTGTAATCCCAGCACTTTCAGAGGCTGAGGTGGGCAGATTGCTTGA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GCTGAGGAGTTTGAGACCAGCCTGGGCAACATAGCAAGATCCCTTCCCTTAAAAAAAAAAAAAAATTTGGCTGG 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 GCATGGTGGCTCATGCCTGTAATCCCAGCAATGTAGGCAGCCAAGACAGGTGGATCACTTGAGTCCAGGAGTTC 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GAGACTAGCCTGAGCAACATGGCGAAACCTTGTCTCTACTAAAAATACAAGTTAGCTGGTTGTGGTGGTATGAG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CCTGCAGTCCCAGCTATTCAAGAGGCTGAGGTGGGAGGGTTGCCTGAGCCTGGCAGTTGAAGTTTGCAGTGAGC 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 TGTGATCATGCCACTGTATTCCAGCCTGGGCAACAGAATGAGACCCTGTTACACACACACACACAAAATAGATA 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 AGTTGTTCACTCTGTCAGCATCTATTAGCCCTTCCCATGTGCAACACTAATTACATGCTAGAAATACATAAATG 2294
Query 1 ----------------------------------------------------ATGGAGTCTCACTCTGTCACCC 22
|||||||||..|||||||||||
Sbjct 2295 AGAGGCTTCCTAAGGTGGTTGAATTTTTTTTTTTTTTTTTTTTGTAGTAGAGATGGAGTCTTGCTCTGTCACCC 2368
Query 23 AGGCTGGAGTGCAGTGGCGTGATCTTGGCTCACTGCAACCTCTGCCTCCTGGGTTCAAGCAATTCTCCCACCTC 96
|||||.|||||||||||||||||||.||||||||||||||||..||||.||||||||||||||.||||..||||
Sbjct 2369 AGGCTTGAGTGCAGTGGCGTGATCTCGGCTCACTGCAACCTCCACCTCATGGGTTCAAGCAATGCTCCTGCCTC 2442
Query 97 AGCCTCCCAAGTAGCTGGGATTACAGACGTGTGCCACCATACCTGGGTAATTTTTGCATTTTTAGTGGAGAGGG 170
|||||.||||||||||||||||||||.|..||.|||||||.||..|||||||||||.||||||.||..|||.||
Sbjct 2443 AGCCTGCCAAGTAGCTGGGATTACAGGCACGTACCACCATGCCCAGGTAATTTTTGTATTTTTGGTACAGACGG 2516
Query 171 AGTTTCACCATGTTGGCCAGGTTGGTCT---------------------------------------------- 198
||||||||||||||||||||..||||||
Sbjct 2517 AGTTTCACCATGTTGGCCAGAATGGTCTTGATCTCTTGACCTTGTGATCTACCCACCTCGGCCTCCCGAAGAGC 2590
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2591 TGGGATTACAGGTGTGAGCCACCGCGCCCGGCCAGGGGATTTCTCCTGTGTGAATTCGCTGGTTAAGTGATAAT 2664
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2665 TAACTGCAGTTAAAATTCAGGTCAAGCATGTGGCTCATGTCTGTAATCCCAGTACTTTGGGAGGCTGAGGTGGG 2738
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2739 AGGATAGCTTGAGTCCAGGAGGAGTTCGAGATCAGCCTGGGCACCATGGTGAACCCCTGTCTCTAAAAAAAAAG 2812
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2813 AAAGATTTTTATTTAAAAAACCTAAACAAATTCAGATAGGAATTTAAAGATAGACCAGGCACAGTGGCTCACGC 2886
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2887 CTGTAATCCCAGCACTTTGTGGGGGGCCAAGGTGGGTGGATCACTTGAGGTCAGGAGTTCAAGACCAGCCTGGC 2960
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2961 CAACATGGTGAAACCCCGTCTCTACTAAAAATATAAAAATTAGAGACGGGCATGGTGGTGGCACACCTGTAATC 3034
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3035 CCCACTACTCAGGAGGGTGAGGCAGGAGAATTGCTTGAACCTGAGAGGTAGAGGCTGCAGTGAACCGAGATTGT 3108
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3109 GCCACTGCATTCCAGCCTGGGTGACAGGGTGAGACTCCATCTCAAAAAAAATAAAATAAAGATAAAATCATAAA 3182
Query 199 -------------------- 198
Sbjct 3183 CACTCAAAAAAAAAAAAAAA 3202
