Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11616
- Subject:
- NR_136211.1
- Aligned Length:
- 3534
- Identities:
- 170
- Gaps:
- 3336
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CGGAAGTCGGCGGCGGTGGCGGAGGCGGTGAGTGCGCGGCTCCGGGGCTGGCCGACTCCGCTAGTGGCCCGGCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGCCTGGGCTCGGGGGCTCCGGGCTCTGGGCTCTGGGTGCGCGGACCGGGCCAGGCTGCTTGAAGACCTCGCGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCTGTGTCAGCAGAGCCGCCCTGCACCACCATGTGCATCATCTTCTTTAAGTTTGATCCTCGCCCTGTTTCCAA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AAACGCGTACAGGCTCATCTTGGCAGCCAACAGGGATGAATTCTACAGCCGACCCTCCAAGTTAGCTGACTTCT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGGGGAACAACAACGAGATCCTCAGTGGGCTGGACATGGAGGAAGGCAAGGAAGGAGGCACATGGCTGGGCATC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AGCACACGTGGCAAGCTGGCAGCACTCACCAACTACCTGCAGCCGCAGCTGGACTGGCAGGCCCGAGGGCGAGG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TGAACTTGTCACCCACTTTCTGACCACTGACGTGGACAGCTTGTCCTACCTGAAGAAGGTCTCTATGGAGGGCC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 ATCTGTACAATGGCTTCAACCTCATAGCAGCCGACCTGAGCACAGCAAAGGGAGACGTCATTTGCTACTATGGG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AACCGAGGGGAGCCTGATCCTATCGTTTTGACGCCAGGCACCTACGGGCTGAGCAACGCGCTGCTGGAGACTCC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CTGGAGGAAGCTGTGCTTTGGGAAGCAGCTCTTCCTGGAGGCTGTGGAACGGAGCCAGGCGCTGCCCAAGGATG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TGCTCATCGCCAGCCTCCTGGATGTGCTCAACAATGAAGAGGCGTGAGTGGGCGGGTCCTGCTGGGGCAGCTGC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CAGACCCGGCCATCGAGGACCAGGGTGGGGAGTACGTGCAGCCCATGCTGAGCAAGTACGCGGCTGTGTGCGTG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CGCTGCCCTGGCTACGGCACCAGAACCAACACTATCATCCTGGTAGATGCGGACGGCCACGTGACCTTCACTGA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GCGTAGCATGATGGACAAGGACCTCTCCCACTGGGAGACCAGAACCTATGAGTTCACACTGCAGAGCTAACCCC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ACCTCTGGGCCTGGCCAGTGGGCTCCTGGGGGGCCCTGCCTTGAGGGGCACTGTGGACAGGAAACCTTCCTTTG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CCATACTGCATTGCACTGCCCGTGGCTTGGCCAGCATCCCCCGGATCAGGGCCCTGTGGTTTGCGTGTTACCCA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TCTGTGTCCCCATGCCCAGTTCAGGGTCTGCCTTTATGCCAGTGAGGAGCAGCAGAGTCTGATACTAGGTCTAG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GACCGGCCGAGGTATACCATGAACATGTGGATACACCTGAGCCCACTCTTGCACATGTACACAGGCACTCACAT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GGCACACACATACACTCCTGCGTGTGCACAAGCACACACATGCAAGCCATATACATGGACACCGACACAGGCAC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 ATGTACGTGCACAGGTGTGCTACACATGTGCACACATGCACAGTTGCACAGACACACACACACAGGTGCACACA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CACGATGCCGAACAAGGCAGAAGGGCGACTCTCACCTCTCATGTGCTTCTGGCCAGTAGGTCTTTGTTCTGGTC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CAACGACAGGAGTAGGCTTGTATTTAAAAGCGGCCCCTCCTCTCCTGTGGCCACAGAACACAGGCGTGCTTGGA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CTCTTGACAAGCAGACCTGCTCCTGCAGAGGAGACAGCCACATTTGGAATTGGGCACCGAGAAGACCTGAGAAA 1702
Query 1 ------------------------------ATGGAGTCTCACTCTGTCACCCAGGCTGGAGTGCAGTGGCGTGA 44
|.|||||||..|||||||||||||||||||||||||||||..||
Sbjct 1703 AACCCACTCTCTCTTTTTTTTTTTTTTGAGACGGAGTCTTGCTCTGTCACCCAGGCTGGAGTGCAGTGGCACGA 1776
Query 45 TCTTGGCTCACTGCAACCTCTGCCTCCTGGGTTCAAGCAATTCTCCCACCTCAGCCTCCCAAGTAGCTGGGATT 118
|||.||||||||||||||||.||||||...||||||||||||||||..||.||||||||..|.|||||||||||
Sbjct 1777 TCTCGGCTCACTGCAACCTCCGCCTCCCAAGTTCAAGCAATTCTCCTGCCCCAGCCTCCTGATTAGCTGGGATT 1850
Query 119 ACAGACGTGTGCCACCATACCTGGGTAATTTTTGCATTTTTAGTGGAGAGGGAGTTTCACCATGTTGGCCAGGT 192
||||.|||||||||||||.||..|.|||||||||..||||||||.||||.||.|||||||||||||||.||||.
Sbjct 1851 ACAGGCGTGTGCCACCATGCCCAGCTAATTTTTGTGTTTTTAGTAGAGACGGGGTTTCACCATGTTGGTCAGGC 1924
Query 193 TGGTCT-------------------------------------------------------------------- 198
||||||
Sbjct 1925 TGGTCTTGAACTCCTGACGTGGTGATCCACCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCAC 1998
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1999 CACGCCTGGCCGAAAAACCCACTCTCATAACAGAAGTGCAGACTCATTGCTAGATTCAGTGCCCTTGAGTGTGC 2072
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2073 CAGAGGTCCTCTGTGTTTGAGACAATCCTGTGTGTGCCAGGAGGCTCCGTGTGCACCAGGGGCTCTCAGAATCC 2146
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2147 CGCTTACCCAGCTGGAGACCATGCCTCTGGCAGCCCCATCTCAGCCAGCCCTGCTCTCTCCCTCTTCCCTCCAG 2220
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2221 GTGAGGCAAACTTCATAGGAATCTGTACCTGAATGTGAGCTCCTGATAATAAAACTCTGAGGCTTTGGTGAGCG 2294
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2295 CATTTCGAGGCCTTTCCCTTGTATGCAGGGTGCCAGTGGGAGCTGCTATGTCTCCTGTGCAGCCAGACACCCTG 2368
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2369 GACGAGGCCCTTCCCACCTCCCCCTTTCCTCACGGCTTCTTCAGCACCACATGTGGATGCCTGTGGGTCAGTCC 2442
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2443 ATCTGTCCATGGGCAGGGGCCGCTGTGAGAGACCCCATGCGCGTGGGATGTGGTAGATGCTGATTATGGGGCCA 2516
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2517 GCCACCCATACAGGTCTATCAGGTCGCAATGGAGGCCCCACTGGAGCGGGAGGCAGGCTGGCCTGGACTTCTGT 2590
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2591 TGGATGATGGGGGCCAGGGGATGGTAGGAGGGGCAGGAGAGCAGGTCTGCATCTGTCTCAGCCCCAGGAGCTCC 2664
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2665 TGGTTTGGGGCCAGCTCTAAGGAGCTTCATCCCTGAGCCTGGCCGAGTATAAGGGGGTCCCGGATATCCAATGC 2738
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2739 TGAGACCTAGACTTTTCTAAGCCTCTGCACCCAACCCCTAACTTGGCCTTTTCAGACCCATGAGAGTGCAGGGT 2812
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2813 GGGTGTGGACCTGCGCCAGGGCTTCCCAGCCTGATTGTGACATGATGTGAGTCCACCTAGGGAGGAGCAGGGGC 2886
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2887 CTCCCCGTCTCTTCCCCTTCTTGCCCAGACCACTTTGCTGGGCTCAGAGCCTTCCATGGCTCACTTTGAACTCA 2960
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2961 GAAGAGTTTCCCAGCTGCGACCCAGGCTGCACCCCCAGGCCTGAGGAGAAACTGAGGCCCCACATCCCATACGT 3034
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3035 GTCCTCTGAGTCAGGACAACAGGCTCCCGGCTGGGGGCACTGCCCTTGCTGCCAACACATTCACCTGCCCCAGT 3108
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3109 GGCTACCATGTCCTGTGCCGGTGACCAGTGCCAGTCCCCAACCTGGATGGTGCCCTGCCCTCATGAAGAGCCCC 3182
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3183 CCGGATGTTCACCTCTGCCCAGAGACCCGGCCTGCCCAGGAAGAGCAGTCTCTGCTCTTGTGTGGGTCCCTCTG 3256
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3257 CCCCCACCCTGCCCAGGGCTCCCCAGCAGCCTGAGGCCCCTAAGGAAGAACAGCCCTCAATGGTGATTCTATTG 3330
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3331 GTGTTATGAGTTGTGTCCCCAAAGAGATATATCAGTGTCCTGACCCACAGTACCTCAGAATGTGACTGCATTTG 3404
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3405 GAGATAGGGTTCTTCCAGGGGTAACCAAGGTAGAATGAGGTCGTTAGTGTGGGCCCTAATCCAATATGACGGCT 3478
Query 199 -------------------------------------------------------- 198
Sbjct 3479 ATCCTTATAAAAAGAGGAACATTTAGGCTGGATACAGTGGCTCATGCCTATAATCC 3534
