Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11616
- Subject:
- NR_145834.2
- Aligned Length:
- 6674
- Identities:
- 170
- Gaps:
- 6482
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTCGCTGCTGCCGCCGCTAAGGGAGAGGAGCATGTCTGCAACTCGAGCCAAGAAAGTGAAGATGGCCACCAAAT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CATGCCCCGAGTGCGACCAACAGGTTCCTGTTGCATGTAAATCATGTCCTTGTGGTTACATATTTATTAGCAGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AAACTTTTAAATGCAAAACACTCAGAGAAATCACCACCTTCTACAGGTAACTAGAAACAGGAAAAGGAAATTGA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CATCTATGCTAACCTGTCTGATGAAAAGGCTTTCGTGTTTTCAGTCGCCTTGGCAGAAATAAATAGAAAAATTA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TCAATCAAAGACTTATTCTCTGATACTTGTTTGCAAAATCTGCTGAAACTTCTGTCAGGATAACATCAGCAAAT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TCTCAAACAGTTATGGACTCTCAGGAGCATTCTGACTGCATCAATAAGGGCCATCGATTGTTTCTTTCTCGCCT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GTCGTTTAGCCTGTGCCACACTTCGGGAGCAAAGCTGTGTAGGCTTGGACTGTTCTGGGATTTCCTTGTTTACC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AAGGAGTATTGTCAGTGTTTTGTGTTTGGGATATAAGTAAGTGTATTTGCCAACAACAAAAAAAAACCAACAAA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AATGCTGGATGGATGTTAAAGGATAAAAAGTGATGGGGTATGGGGTAGGTATGAAAACTAGGGTAATAAGATGC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TTGATTGTTTTCAGGTTTGCCACCAGAGATGCAATATTTTAAATACTGTCAGAAAGAGTGATTTTTAAAAATAT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 ATATTTCAGATTTTCAGTGCTAACAGATTGCATATATACAGTTCATTTACTTTTATTAAATTGGCAATCGATAT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TTTATTGAATGGGGAATTAAGAATATAAACTGTAAATTTTGTCTTAAATTGATTTTTTTTCTTGGCCTTTATTT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TTATTACTTAAGGTATGAGTTATATTTTAGGAGATACTTTCTAGACAGTTTGAAGTTTGGGTGCTATATGAAGA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AAAACATTTAATGATATACTCAGATATAAACACCTTGTTTTCTTGAATGTAATTTATTTATTAGCTAAAAAAAA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AAAACAAACTGCTCTCAAGATGGTGCCTGTTAACCTAAACATGAAATATATTTATTACATGCAAAATATTTCTT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AGCCACTTTTAAGCAGTAATGTTTTATCTGAATGGATATTTGTTTCTATATCCTGATAATTATTTAAATTGTTA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CTTTCAATCTGGAAGAAAAAATAAACCTTAATATTGAAACTAAGTAGATTAAATAGTGTGATAAAAGTTTTTTG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TTCTGGTGAAGTTTGTGAAATATATTTAAATTCTTAATTTTTCTAGTGTTAAGTCATAATCGTTTATAGTTGAT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TTATATTAAATGCTTTTGCATTTTGGCATATCAATTTAATGATTAACATATTCAAACTTGGTAATCACTCCCCT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TATTTTCAGTCGCTCTTCCCCCAATCTGTTTAGAAATCCTTTTAAAGCCTTCTTACAGAAGATAGTCATCAGTT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AGATTTAGCCCCCTTTTAAGAGAATCTCCCTTTCAATTTTAGCCGTAACATTATCAATTTCAGACTTCATCCTG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CATCTCCCATCACCTCCTCAAAGAAAAAAGGTCAACATTTTTTCCTACTTTATTTAAATGGTAACCAGCAGAGG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GAGCTTAAGAGGTACTCTAGATAGGATAAAGAATTTTCCTAAGGATTCCTTTTCCTTTAATCCCTGTATCTATC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TGCAGGTACTACTGCAACTATTTTGTATGCATTTTATTTATTTATTTAGGAGACAGAGTCTTGCTCGGTCGCCC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 AGGCTGGAGTGCAGTGGCACTGTCTCAGCTCACTGCAACCTCTGCCTCCTGGGTTCAAGTGATTCTTATGCCTC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 AGCCTCCTGAGTAGCTGTGACTAGAGGCGTGCGCCACCACGCCTGGCTGTTTTTTTTTTTGTATTTTTTAGTAC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 AGATGGGGTCTCAGCATGTTGGCCAGGCTGGTCTCAAATTCCTGGCCTTAGGTGATCTGCCCGCCTTGGCCTCC 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 CAAAGTGCTGGGATTACAGGCATGAGCCACTGCACTCAGCCTTGTGTGCGTTTTAGAGTCTTAACTAGTAGTTT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CCCCAATAATGTAATGTGATTTTATCTTTGAAACATACTGTAAGGAAACTTTTGATTTTAAGTAAAAAAGCTTA 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 AAAATGATTAATATCTAAAAATGCTTGTATACATATATATGTCCTCAGAAAAAGCAAGAACAGCTTGTGGAATA 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 AGCACGTCTTTAAGGAATTATCGATGTCAGAGTCTATCCATTTAAAGCTGAAGACCATTACAGGAAAGTCATGT 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 TAAAATATTCATTGGATATGGTAAAGGAGGTACTGGTGGCTGGGCTGGAGCTTGCCGTATAGAAAAGTAATTAC 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TTCAGATCTCATAATGTTAAATTATTGGCTTATTTAAAAATTTCCGTGGCAGAGAGGCAAATTAGGTTTCCTCT 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 GTGACATAACCTATTTAACCAATTTTTCAAAAAATTGTACTCTATGAGCTTTCTTGTTATAAAGCTAAAAAATT 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 TAATTTGTCTAGGCATGTTGTAATGGTCCCAGAAAATATTACTTTGTCACTGGTGTCAGAGAAACCTCTGTCAT 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 CAGCAGATGTCCTAAGAGTATAATTATAGTTCTTTACTTAATCCAAAATTTGTTCTGCTCTGATATCTATAAAT 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 GATATGATTATTCAAAATACCTTGAAATGATTCCACAATTAGATTAGGTCTGTTGAAGATAACTTATTCTTAAA 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 TATGAGTAAGATTAAATAAAAGTAGTTTGAGAGTTGTTACTCCCTGCCTCAACTCCATGGTATTCCAAAATGTT 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 TTTGTGGGCACTTTAATACTTGTAGTTTGATTTTGTTTGTTAGTTTTAGAAATGAACATTTCTTAGATTTTCAT 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 GGGTATTTTTTGGCTGTATTTAAATGTAAATGATATAAAAGTAAGGGAAATTGTGCAAATTATTTCTTGTGTAG 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 TAATCAGTGGAAGTGATCAAACAGCTTGAAGCAGTTTATGATGAGAAAATTTAAAATTGCAAATGACCTGAAAA 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 TTTAGCCAGTCTATTCTTATTTCTTTAAATTTCAGAAATACTTAAGAAAAAAAAAAAAAAGGTCAGTATGACCT 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 CTGAGTTGCTTCCTAAAAGTAATCAGATAGTGTTCTCCCTCAGATAAGATTTCAAATTGAAAAGTATTTGACTT 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 CTTTAACTCTAGTAATTGCACTTGATTCTCTAATTCTGATCATTAAAATGACTTGGCAATATTTAATTTTGGCT 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 TGCCTTTCAATCTGCATGTTTGTCTTAAATTTAGAAAAATTAAGCTCTTTACTTACTTTTATATAAAGTATTAA 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 TTGGCCAGGCATGGTGGCTTACACCTGTAATCCCAACACTTTGGGAGGCCAAGGCAGGAGAGTTGTTTGAAGCC 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 AGGAGTTTGAGACCAGCCTGGGCAACATGATGAGACCGCGTCTCTACAAAAAGTAAAATTAGCTGGGTGTGGTG 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 CTTCCAGCTACTAGGCAGCTGAGGCTAAAGGATCACTTGAGCCCAGGAGTTCGAGGCTGCAGTGAGTGATGATC 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 TTGCCACTGCACTCCAGCCTGGGAGGCAGAGCAAGAAACACCCTGTGTGAAAAAAGTATTGAATTTGTTTGATT 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 CCACTTTCAAAATATGCTCTAGATACAGGTAGTCATTCTGCCAAATTGTGTTCTTCTCTAAAACATTTTGTCCG 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 TCATTCTTTGAAACTCATTCTTAATTATTTCCACTTTACCTTCTAGTTTGGTTTGATGCCTTATATTCTTGCTA 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 GTTAAAAGCATTTTTTCCCTAGTATTTTCTGTCTTTCTAGCCTTTAAGGCATATTGTTGTTAACAAATCTCTTA 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 TTTAAGTTAATTAAAGTTTTTTCTGTGCAGCTGGGTTTTTTCTTTTACTACATGACAAGCTTCATTTTTACATT 3922
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3923 TGGAAGTACATGTATATATGTTTATATATTTTTATTCTCAGGATCTATTTTCTAGGGAACTATTTTTTTAAATT 3996
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3997 ATTCTTTTGTGCTGCCTTAACCCATTTATTATAGTTTGAATATTAGTAGTACTTACTACTCAAAGATTACAACT 4070
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4071 ATACTAATAACTATCCTAACATACAAAGCAGACTCTCCAGGATTAAAAGTATGAGACATATAACAGAGTCTGGA 4144
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4145 ATAGAATAATTCTTTTTACCCCAGTCAAGTATTTGCCTTTTGCATTATTAAGGAATCTGTTTTGTTCTTTTATT 4218
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4219 GATAATTTCTATATTTTTTTCTTTGCCTTATTGCACTGGTTGGGACTTTTTGCCTTGATCCAGTTGTAGGGGGG 4292
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4293 AAACATTCAGTCATTAAGCATTAAATAACTTTGTTGTTGTTGTGGGCTTGAAAAAATACCCTTTAGTAGATTGA 4366
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4367 GGGTAGACTCTTTTATTTCTGCTTGTTGGAAGTTTTCTGTCAGGAACAGATGTTGAATTTTGTCAGATGCTTTT 4440
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4441 TCTGCATAATTGATAGGACCTTTTTTCTCCCCTTTAGAATGTTCATATGGTGAAACATACTGATAGCTTTTCTT 4514
Query 1 ----------------ATGGAGTCTCACTCTGTCACCCAGGCTGGAGTGCAGTGGCGTGATCTTGGCTCACTGC 58
|.|||||||||||||||||||||||||||||||||.|||.|.||||||||||||||||
Sbjct 4515 TTCTTTTTTTTTTGACACGGAGTCTCACTCTGTCACCCAGGCTGGAGTGCAATGGTGCGATCTTGGCTCACTGC 4588
Query 59 AACCTCTGCCTCCTGGGTTCAAGCAATTCTCCCACCTCAGCCTCCCAAGTAGCTGGGATTACAGACGTGTGC-- 130
|.||||||||||.||||||||||| |||.|.||| ||||||||||||||.|||||..||||| ||||||
Sbjct 4589 ACCCTCTGCCTCTTGGGTTCAAGC--TTCCCTCAC--CAGCCTCCCAAGTACCTGGGTATACAG--GTGTGCAT 4656
Query 131 CACCATACCTGGGTAATTTTTGCATTTTTAGTGGAGAGGGAGTTTCACCATGTTGGCCAGGTTGGTCT------ 198
||||||.||.||.|||||||||.|||||||||.||||..|..|||.|||||||||||||||.||||||
Sbjct 4657 CACCATGCCCGGCTAATTTTTGAATTTTTAGTAGAGATAGGTTTTTACCATGTTGGCCAGGCTGGTCTTCAACT 4730
Query 199 -------------------------------------------------------------------------- 198
Sbjct 4731 CCTGACTCAGCCTCCCAAAGTGTTGGGATTACAGTCTCGCTCTGTCGCCCAGGCTGGAGGGCAGTGGTGTGATC 4804
Query 199 -------------------------------------------------------------------------- 198
Sbjct 4805 TTGGCTCAATGCAACCTTGCAACCTCTGCCTCCCGAGTTCAAGCGATTCTCCTGCCTTAGCCTCCTGAGTAGCT 4878
Query 199 -------------------------------------------------------------------------- 198
Sbjct 4879 GGAATTACAGGCGCACGCCACTACACCCAGCTTCTTTTTGTATTTTTAGTAGAGATGGAGTTTCACCATGTTGG 4952
Query 199 -------------------------------------------------------------------------- 198
Sbjct 4953 CCAAGCTGGTCTCGAACTCCTGAGCTCCGGTGATCCACCCGCCTTTACAGGCATGAGCCACCGTGCCCGGCTGC 5026
Query 199 -------------------------------------------------------------------------- 198
Sbjct 5027 ATTTCTCTTTTGTAAGAACCTGCTCTGGTTTATTGATATTTTGCTGTTTTTCTGTTTTAAGTTTCATTAATTTC 5100
Query 199 -------------------------------------------------------------------------- 198
Sbjct 5101 TGATCTTTAGTATTTTCTCCTTTCTTTGCTTTGGGCTTATTTGCTCCCTTTTCTAGCTTATTGTGGCGGAAGCT 5174
Query 199 -------------------------------------------------------------------------- 198
Sbjct 5175 CAGATCATTGATTTTAAAATTTACTTATTTATTTATTTATTTATTTAATTCAACACTGATCAGAAGGCTTTTTG 5248
Query 199 -------------------------------------------------------------------------- 198
Sbjct 5249 TGCTTTTCTAAAAAAAGCATTTAATGCTATAAATTTCCCATTTGCTTTATCTCACAAATTTTATTGTGTTGTAA 5322
Query 199 -------------------------------------------------------------------------- 198
Sbjct 5323 TTTTGTGTTCAATTTAGAATATTCTGATTTTTCTTGGTATTACTATAATTTTCAAATATTTAGAGTTTTTTTCA 5396
Query 199 -------------------------------------------------------------------------- 198
Sbjct 5397 GTTATCTTTCTGTTACTGATTGTAATTTATTGTTTTTTAAAATTATAGTTCTTTGAATAGTTTTGCAGTATTTG 5470
Query 199 -------------------------------------------------------------------------- 198
Sbjct 5471 CTCTAGGGATTACTATAAACATACTTCACTTTTTACAGTTCACTTAGAAGTCAATATTTTACCAGTTCAAGTGG 5544
Query 199 -------------------------------------------------------------------------- 198
Sbjct 5545 AATGTAGAAAAATCTTACCACTGTTTACATTCCTTTACCCTCTCCCCTTTATGTTATAATTTTCTTATAAATCA 5618
Query 199 -------------------------------------------------------------------------- 198
Sbjct 5619 TAAGACTTGGCTGGGCACAGTGGCTCACCTGTAATCCCAGGACTGGGAGGCCGAGGCGAGCAGATTGCTTAAGT 5692
Query 199 -------------------------------------------------------------------------- 198
Sbjct 5693 CCAGGAGTTCGAGACCAGCCTGGACAATGTGGTGAAACCCCAACTCTACAAAAAATACACAAAATTAGCTAGGC 5766
Query 199 -------------------------------------------------------------------------- 198
Sbjct 5767 GTGGTAGCATGTTCCTGTAGTCCCAGCTACTCAGGAGGCTGAAGTGGGAGGATTACTTGAGCCCAGGAGGCAGA 5840
Query 199 -------------------------------------------------------------------------- 198
Sbjct 5841 GGTTGCAGTGAGCCAAGATCACTCCACTCCACTCCAGCCTGAGTGACAGAGCTAGACACTGTGTCTCAAAAAAT 5914
Query 199 -------------------------------------------------------------------------- 198
Sbjct 5915 AAAAATAAAAAATAAGACTCATCAGATAATGTATTTTTTCCTTACAACTATCATAGATATTTTTAAGAACCCAA 5988
Query 199 -------------------------------------------------------------------------- 198
Sbjct 5989 GAGGAAAACAGTCTATCACATTTACCACAATATTTATCATTTGTATTAATCTTCCTTAATTCTTGATGTTCCAA 6062
Query 199 -------------------------------------------------------------------------- 198
Sbjct 6063 GTTTACATAGGTATCAGTCCTTTTCATCTGGAAAATTTCTTTTAGTGCAGGTCTGTTGACATTTAATTCTCTTA 6136
Query 199 -------------------------------------------------------------------------- 198
Sbjct 6137 TTTTTTCTTCATCTGAGAATGTCTTTATTTTGCCTTAATTCATGAAAGATATTTTTGCTGGATATAAACTACTG 6210
Query 199 -------------------------------------------------------------------------- 198
Sbjct 6211 TGTTGACAGTTCTTTCAGCCTCCATGGTTTCTGATGAGAAATGTGCAGCCATTAAAGTAATATTTCCCCTGTAT 6284
Query 199 -------------------------------------------------------------------------- 198
Sbjct 6285 GAAACATGTTATTTTTCTCTGAGTATTTTCAGGAATCTTTGTCTTTGGTTTTTATTGGTTTGATTATGATGTGC 6358
Query 199 -------------------------------------------------------------------------- 198
Sbjct 6359 CCGGGTGTTTGAATTTATTCTCTTTGGGATTTGTTGAGCTTAAATGTGTAAGTTTATGCCTTTCATCAGATTAT 6432
Query 199 -------------------------------------------------------------------------- 198
Sbjct 6433 GTAAAGTTTTAAACCATTCAGATATTTTCTGCTCTACTTTCTCCTCCCTCTTAGGCTCCAGTGATGCAAGTGTT 6506
Query 199 -------------------------------------------------------------------------- 198
Sbjct 6507 AGACTCTTTGGTATTATCTCACAGATCTCAGAACCTCTGTTCATTTATTTTATTTTAATAAATCATTTCAGTTA 6580
Query 199 -------------------------------------------------------------------------- 198
Sbjct 6581 ACAAAATCATATATTGTATGCAGCATGATGTTTCAATATGTATGTTCACATTGTAGGATGTCTAAAGTAAAGAT 6654
Query 199 -------------- 198
Sbjct 6655 AATGAACATATGCA 6668
