Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11616
- Subject:
- XR_001739702.2
- Aligned Length:
- 3447
- Identities:
- 172
- Gaps:
- 3251
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTTCCGTGTGCGCGGCGCATACGCACCTGGGTTGTCTCGAGCCTGCGGTAGTGGCCAGATCCCAGACATCCGAG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TAGATCCCGTGAAAAGCTTCTTCTTGGTTTCTTCGTACATTCTGGATCCACCCCTTTCATGCATATTCCAGACC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ACATTTCCACTGGAGCAGTTGAAATGAGAGAGATGGGAATGGGACTCACCCGAACCAGAGGAATTTTTATTACA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GACCCATTAACAGAGGTGTCAAAGTCACAGGAACAAGGATGTGCACCTCAGAAACACAGAGGCTAGCCTGGCTG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AAGCTCAGCTGCACAGAGTCTGTCCTGAGAAGCAGAATGCCACTGTCCCCTGGGCCCTCCAGACTGCCAAGGCT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GCTCAGTTTCAGAGAGCAGGCTCCCTGTGGCCTCACACGCCGGCTGCCAGCTGGGCCAGGTAACTCTGGCCAGG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CTGCACTGTGAAGAACACGAGAGTCGGCGGAGACCTGTGCCTGCTCTTCTCAGCCTCAATGTCTGGAAGACAAA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AAAAGGCATCCTGCTCCCAAGATTGTGGTGGAGGCCAGCAGGGTGACGCACATGAAAGCCACTGGAGATAGATG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GCACTTGTTCCCACCCACTGCCCACAACAGGCCCAGGACTGCCTCAGCCCCGGTGGACCCCAGAGCCAGCAGGC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CCTTCAGAATGGAAGGTGCCAAACACCATCGGAAGGCGTGGTTCTTTTCAGAGAACCAGACTCTGAGACTGTGG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CCTCCCACTATGAGTCACCACCTCTGATTCCTGAGGTCCCCTCCAGTCATTGGCTCTCTCCCAAGCCAGCCAGC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TGATCAGCCTTGAGGACAGCAGAGTGTCTGCCAAGAGAGATCTGTGAAGTTTCCCATCACCGTGGCAGTCCACA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ATGTGAAGCCCCTGAGGCCACCCTTCTCCATGTGTCCCCCACACTGTCCCTGACCCTCCCACCATCCTAGAAAA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CCAGCCTCCCAGGTCCTCTGTCATGGAAGTAATTTACAGCAAGGCAGAAAGAGCTGAAAGATTTATAAATGTGT 1036
Query 1 ----------------------------------------------------------ATG--GAGTCTCACTC 14
|.| |||||||||||
Sbjct 1037 AAAATTTACAAAGGTGTTTCTTTCTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTTTGAGGCAGAGTCTCACTC 1110
Query 15 TGTCACCCAGGCTGGAGTGCAGTGGCGTGATCTTGGCTCACTGCAACCTCTGCCTCCTGGGTTCAAGCAATTCT 88
|||..|||||||||||||||||||||...||.||||||||||||||||||.||||||.|||||||||..|||||
Sbjct 1111 TGTTGCCCAGGCTGGAGTGCAGTGGCACAATTTTGGCTCACTGCAACCTCCGCCTCCCGGGTTCAAGTGATTCT 1184
Query 89 CCCACCTCAGCCTCCCAAGTAGCTGGGATTACAGACGTG--TGCCACCATACCTGGGTAATTTTTGCATTTTTA 160
||..|||||||||||||||||||||||||||||| ||| ||||||||..|||.|.|||||||||.|||||||
Sbjct 1185 CCTGCCTCAGCCTCCCAAGTAGCTGGGATTACAG--GTGCATGCCACCACGCCTAGCTAATTTTTGTATTTTTA 1256
Query 161 GTGGAGAGGGAG--TTTCACCATGTTGGCCAGGTTGGTCT---------------------------------- 198
||.||||..||| |||..||||||||||||||.||||||
Sbjct 1257 GTAGAGACAGAGTTTTTTGCCATGTTGGCCAGGCTGGTCTTGAACTCCTGACCTCAGGTGATCTGCCTGCCTCA 1330
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1331 GCCTCCCAAAGTGCTGGGATTACAGGCGTGAGTCACCGTGCCCGGCCTACAGAGGTGTTTCTGAGTGGAGAAAC 1404
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1405 CACTGCCTGGTTGGACTGACTGCCCAGTTCCACCACCCTGTGAGCCCATGAGTGAGCTCACTGCACTTGTTATA 1478
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1479 GACATCCTACCACCAGCAGCCTGATTTTGCTGAGTCCGTAGCTTACAACTCCAATCTCATGGCCCTGCCTTTCA 1552
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1553 CCTCACTTGCTGCCTTAAAAACCTGCAGACTGAGGTGGCGTAGAAGCTGTGACATCCCAGTACCCAGAAGTTCA 1626
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1627 TCTCACACCCAGATCTTGGTTTCTAAATGTCATTCTCTACTAAAAGGGACCAGGGCTGGTACAGGAGAAGAGCA 1700
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1701 AGAGCTTGGAATATCTTATACCTGAGAGTAAGGAAGTGCTCAGAGAATCACAGGAGCACGTTAAAAGGACATAG 1774
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1775 AAGTCAGTTTAATGAGACTGCTTCTGGCCAAAGTTGGAACACATCAAACATTAAAACAATGATGGTAATGGATT 1848
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1849 AGATTCCATAGAATAAAATCCTTGAGGACATAGTTATATAAACATAACTGAGGAAGAAGGAAAAGCTCTCCCTA 1922
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1923 ACAGAATAATACAACTAGTAAATGGGAAAGGAAAGGAGTTAGGAATTCACGCTGGGTATTGAAACTAGTGGGTG 1996
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1997 AAAGCTCAATGAATCGGATTCTTAGTCTCAATGTCTCTCCTCTCAATTTAGTAATTATAGTGGAGTAATCATGA 2070
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2071 CTTTACAGTGGAGAAACCTGGCCAACACTACCTTCACAACACTAACAAAAACCTTGCAGACCTGCAGCCTAAGC 2144
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2145 TCCCAGAAGTCACCTGCTGAAATGCCTTCAAAGAGTGACCTCTCTGCGTGTAGTGCTCAGCAACTTGGGCTCAG 2218
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2219 TGTCTATTTCCACAAGCTACAAACCAGAATACAGTGGAATTCAGCCCATATGTGGTAATTTATCTACCAATCAA 2292
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2293 GGACCTTTGACTCCAAAAATTACCTTTTTTGTACAAGTGACTACCTGGTGTAGAGCTCAGACATGGCTTTGAAT 2366
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2367 TTTTGCCATGCTGTGTGAGCTCAGGCAAGCTGCTTCACCTCTTTGAGCTTCAATCTTTTATCTATAAAATGGGA 2440
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2441 ATAACAATAACTTAATGAAACAGCAATTCCAGTGTTAGGTATTTCCTCAGGAGAAATGAAAACACGTTCACACA 2514
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2515 AATAATTGTACATGTATGTTTCTACACGCTTTATTCATAATAGTCATAAACAACCTAAATATTCATCAACTGGT 2588
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2589 TAGCAGAGAAAAGAGCAAACCACTGATGACATGAACGAATTTCAGAAGCACTGTGCTCAGTGAAAGAAGCCAGA 2662
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2663 CAAAAATTACATCTTACATAAATTTCATTTATATGAAATTCTAGTGAAGGCAAAACATATAGCCAGGGGCCAAG 2736
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2737 AGGGGAGGATGGTCTGCAAAGAGGCAGGAACTTCTTCCTGGGGTGATGGGAATATTCTGTGTCATGAACATCGT 2810
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2811 GATTGTGGTTACAAGACTATACTTTTGTCAAAACTCATCAAATTGTACACCTAAAATGGATGCATTAAGCCTCA 2884
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2885 ATACAGCCAATAAAAGATACCTACGTTACAGTATCTTCTGAGGAGTAATGGGGTGATATATATGCAGCCCCAAG 2958
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2959 TTCAGTGCCTGTGGTGAGAGGAGTCCTAAAATAGTACCTGTGACCACGCCCCACGGTCTTAGACCTGGGCAGGG 3032
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3033 CAACTGTGCAGACAGCAGGCCCAGCCAGGAAGCAAGCTGGCAAGGCGTTCTGCAGCGAAGAAAGACCTTAAATG 3106
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3107 CTCTGGGGGATACGGACTGAAGAGGTGTTGAGAGGTAACTGCATACCTCTCACTTCTCAGGAACTGCCAGTTCC 3180
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3181 CTGGGCAGAATCAGGACCTGGGACAGACCTGCCTGCTGATGAGATGGCCCCACACCATCTGCAGGCCAGATTTG 3254
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3255 GTGCTGTGGACAATGTCGGAGGGGACAGTCTACAGGACAGCCAACGGCTTTCAAAAATTCTGATATGATCAACT 3328
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3329 GGTGACACTACTCAGAAGACTGTGTTAAGAATTCCGAATTGGGGCCGGGCAAGGTGGCTCATGCCTGTAATCCC 3402
Query 199 ------------------------------------------- 198
Sbjct 3403 AGCACTTTGGGAGGCCAAAGCAGGTGGATTGCTTGAGCCTAGG 3445
