Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11616
- Subject:
- XR_001750478.2
- Aligned Length:
- 2821
- Identities:
- 170
- Gaps:
- 2627
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CCCCGCCCCTCCTCGGACTCTACCCAGTACTGAACTAGGGGCAGCTGGGCTCCAGAGTCCCTCGGGTCTCAGGT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CATGGCGGTCGCGGGGCCCGCGCCCGGAGCTGGCGCCAGGCCCAGGTTAGATCTGCAATTTCTCCAGCGGTTCC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGCAGATACTGAAGGTTTTGTTTCCTTCTTGGTCATCACAAAATGCCTTGATGTTCCTGACCCTTTTGTGCCTG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ACCCTACTGGAGCAATTTGTGATCTACCAGGTTGGCTTGATCCCCAGTCAGTACTATGGGGTCCTGGGAAACAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AGACTTGGAAGGGTTTAAGACTCTGACATTCCTGGCTGTCATGCTCATTGTTCTGAACTCCACGCTGAAGAGCT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TTGATCAGTTCACCTGCAACCTGCTGTATGTGAGCTGGAGGAAGGACCTCACTGAGCACCTTCACCGCCTCTAC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TTCCGGGGCCGTGCGTACTACACCCTCAACGTGCTGCGGGATGACATCGATAACCCGGACCAGCGCATCAGCCA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GGACGTGGAGCGATTCTGCCGGCAGCTCAGCAGCATGGCCAGCAAGCTCATCATCTCCCCGTTCACCCTCGTCT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ACTACACTTACCAGTGCTTCCAAAGCACAGGCTGGCTCGGGCCTGTGAGCATCTTCGGGTATTTCATCCTGGGG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 ACCGTGGTGAACAAAACTTTGATGGGCCCCATTGTGATGAAGCTGGTGCATCAGGAGAAGCTGGAGGGAGATTT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TAGGTTCAAGCACATGCAGATTCGGGTGAATGCGGAGCCTGCTGCTTTCTACAGAGCTGGGCATGTGGAGCACA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TGAGGACAGACCGCAGGCTGCAGAGACTCCTTCAGACCCAGAGGGAGCTGATGTCCAAGGAGCTCTGGCTGTAC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ATCGGCATCAACACCTTTGACTATCTGGGCAGCATCCTGAGTTACGTTGTCATCGCAATCCCCATTTTCAGCGG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GGTCTATGGAGACCTGAGTCCCGCAGAGCTTAGCACCCTGGTCAGCAAGAATGCCTTTGTGTGCATCTACCTCA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TCAGCTGCTTCACCCAGCTCATCGACCTGTCCACGACGCTCTCAGATGTGGCTGGCTACACGCACAGAATTGGG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CAGCTTCGGGAGACGCTTCTGGACATGTCCCTGAAGTCACAGGACTGCGAGATCCTGGGCGAGAGCGAGTGGGG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CTTGGACACACCCCCAGGGTGGCCAGCGGCAGAGCCAGCAGACACAGCATTTCTCCTTGAGCGGGTCTCCATCT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CTGCCCCCTCCTCTGACAAACCCCTAATCAAGGATCTGAGCCTAAAGATCTCCGAGGGACAGAGCCTGCTCATC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 ACAGGCAACACGGGCACTGGCAAGACCTCCTTGCTCCGGGTTCTGGGTGGCCTCTGGACGAGTACACGGGGTGA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TATATCCCCTGAAGGAGGTCTACCCCGACTCAGGAGAGATGCCCACTGGGACAAGGAAAGTGATGCCTTCCTTC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 ACCCACCCCTTCCCTTATGAAGATCTGCAACCTGTGGTTTCAAAGCCTTCGCCCAGCATTCTGAGGCCCCCACC 1554
Query 1 --------------------------------------------------------------ATGGAGTCTCAC 12
|||||||.||||
Sbjct 1555 CCTGCATCATCCATGATGTGCCCTGTCTATTCTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGATGGAGTTTCAC 1628
Query 13 TCTGTCACCCAGGCTGGAGTGCAGTGGCGTGATCTTGGCTCACTGCAACCTCTGCCTCCTGGGTTCAAGCAATT 86
||||||||||||.||||||||||||||.|||||||.||||||||||||||||..|||||.||||||||||||||
Sbjct 1629 TCTGTCACCCAGACTGGAGTGCAGTGGTGTGATCTCGGCTCACTGCAACCTCCACCTCCCGGGTTCAAGCAATT 1702
Query 87 CTCCCACCTCAGCCTC--CCAAGTAGCTGGGATTACAGACGTG--TGCCACCATACCTGGGTAATTTTTGCATT 156
|.||..|||||||||| || |||||||||..||||| ||| .||||||.|.||||..|||||||||.||.
Sbjct 1703 CCCCTGCCTCAGCCTCTTCC--GTAGCTGGGGCTACAG--GTGCACGCCACCTTGCCTGCCTAATTTTTGTATA 1772
Query 157 TTTAGTGGAGAGGGAGTTTCACCATGTTGGCCAGGTTGGTCT-------------------------------- 198
||||||.||||..|.||||||||||||||||||||.||||||
Sbjct 1773 TTTAGTAGAGACAGCGTTTCACCATGTTGGCCAGGGTGGTCTCCATCTCCTGACCTTGTGATCCACCTGCCTCG 1846
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1847 GCCTCCCAAAGTGTTGGGATTACAGGCGTGAGCCACTGTGCACAGCCTTGCCCTGTCTATTTTGACCAGCCAGG 1920
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1921 AGGCTCTGGCTTTTTGCAGAAGGCTTCTTTGTTGTGCAGGTTCTGCCGATGATGAGAGGATCTTGAGGTTCTTG 1994
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1995 GAATTGGCAGGCCTGTCCAACTTGGTGGCAAGGACAGAGGGCCTGGACCAGCAGGTGGACTGGAACTGGTATGA 2068
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2069 TGTTCTGTCCCCGGGGGAGATGCAACGGCTCTCCTTTGCCCGACTCTTCTACCTGCAGCCGAAGTACGCAGTGC 2142
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2143 TTGATGAAGCCACCAGTGCCCTGACAGAGGAAGTGGAGAGCGAGCTCTATCGCATCGGCCAGCAGCTGGGGATG 2216
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2217 ACGTTCATCAGTGTGGGACATCGGCAGAGCCTTGAGAAGTTTCATTCCTTGGTTCTGAAACTCTGTGGAGGAGG 2290
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2291 AAGATGGGAGCTGATGAGAATCAAAGTGGAATGAAGCTCTGGCTTTTGGAAGGAGAGCCACACTGTGGCGGGTC 2364
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2365 GGCGGCCCTCAGGAGAGACCAGGAGGACTGACAGCGAAGATCGAGCTCAGGTTCGCCACATAGATCCCGTGCAG 2438
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2439 GAGCCACATGGGTCCTGTGCAGGACCCCTAGCAGTGGTGGGCTGAGCCCAGGTCTAGGTTTCTGTGGGGGACAC 2512
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2513 TGAATCTCCCAGTGTTCAGTCTCCCAGGACTCTGCTGCCTCAGCCAGAGCCTCCATATGCTTGAAGTGCTGATT 2586
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2587 ACCTACAAATGATTTCAGATCATGTTTGCTAAAGAGAAATCTGGAAGTGTGAGATCTGTAAGAAATGAAAGAAA 2660
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2661 TGACTCTTGGAGTCAAGAGATCTGGAAATCTTTTAATCAGTTAAATTGTGCAGCAATAGATTTTTAACTTTAAC 2734
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2735 TGACCATTTAAGTTTTTTAATAAGTTTTTTACAAAGAAAAGTTAAACATTAAAAAGAATTACAGCTTTCTGTCT 2808
Query 199 --------- 198
Sbjct 2809 TCTCTATCA 2817
