Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_11616
Subject:
XR_001753711.1
Aligned Length:
2230
Identities:
171
Gaps:
2036

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  TCGAATATTTTCCATGATCAAACGCTGTTCATTGGCTTTCCCTCCTCCGCTAAGGCGGAGCCTACTTCTCTTGC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GCTCCCATTTGGGTCGTGCCATTCTCAGGGGAACCAACCCCAATACCTAAGGGAGGCTGGGAGGCGTGTCCTCA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GGACCGTAGTTCTTATTGGTTTCGCTGCTCGCTGTGGGGTGGGCTGGTGCAGCCGCAGCTGTTGCTTATTGGCC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CACCGATTCCATGGGGAGGAACTTGGCTGGGCCTAAACTCAATCCGTGGTCTGGTACAGGTTTCAGGGCAAAGC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GGCCATGCGTTCCGGGGGCCGCGGGCGACCCCGCCTGCGGCTGGGGGAACGTGGCCTCATGGAGCCACTCTTGC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  CGCCGAAGCGCCGCCTGCTACCGCGGGTTCGGCTCTTGCCTCTGTTGCTGGCGCTGGCCGTGGGCTCGGCGTTC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  TACACCATTTGGAGCGGCTGGCACCGCAGGACTGAGGAGCTGCCGCTGGGCCGGGAGCTGCGGGTCCCATTGAT  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  CGGAAGCCTCCCCGAAGCCCGGCTGCGGAGGGTGGTGGGACAACTGGATCCACAGCGTCTCTGGAGCACTTATC  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  TGCGCCCCCTGCTGGTTGTGCGAACCCCGGGCAGCCCGGGAAATCTCCAAGTCAGAAAGTTCCTGGAGGCCACG  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  CTGCGGTCCCTGACAGCAGGTTGGCACGTGGAGCTGGATCCCTTCACAGCCTCAACACCCCTGGGGCCAGTGGA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  CTTTGGCAATGTGGTGGCCACACTGGACCCAAGGGCTGCCCGTCACCTCACCCTTGCCTGCCATTATGACTCGA  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  AGCTCTTCCCACCCGGATCGACCCCCTTTGTAGGGGCCACGGATTCGGCTGTGCCCTGTGCCCTGCTGCTGGAG  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  CTGGCCCAAGCACTTGACCTGGAGCTGAGCAGGGCCAAAAAACAGGCAGCCCCGGTGACCCTGCAACTGCTCTT  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  CTTGGATGGTGAAGAGGCGCTGAAGGAGTGGGGACCCAAGGACTCCCTTTACGGTTCCCGGCACCTGGCCCAGC  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  TCATGGAGTCTATACCTCACAGCCCCGGCCCCACCAGGATCCAGGCTATTAGAAGCGTCTGCACCGTTTGAACC  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  TGCTGCAGTCTCATCCCCAGGAAGTGATGTACTTCCAACCCGGGGAGCCCTTTGGCTCTGTGGAAGACGACCAC  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  ATCCCCTTCCTCCGCAGAGGGGTACCCGTGCTCCATCTCATCTCCACGCCCTTCCCTGCTGTCTGGCACACCCC  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  TGCGGACACCGAGGTCAATCTCCACCCACCCACGGTACACAACTTGTGCCGCATTCTCGCTGTGTTCCTGGCTG  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  AATACCTGGGGCTCTAGCGTGCTTGGCCAATGACTGTGGAGAGGACTGTGAGAGAGAAGGTCCCAGCGGGGGCC  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  AGTGAAGCTCAGGCAGGATCTGCCTAGGGTGTGCTGGTTTGTCCTTTTCATACCTTTGTCTCCTAATTGTGCTA  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  CAATTGGAAGACCTTCTTTCTTTTGATTGTCTCAAGCTGCCACCCTTCAAGGACAGGGAAGAGACCACTGTGGG  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  ATGACAGCCAGAGGAATAAGAACTTGCTCCCTCCCCAGAGGTAAACACTTGGTCCAAAGGTTTGCAGGGACCAA  1628

Query    1  -----------------------ATGGAGTCTCACTCTGTCACCCAGGCTGGAGTGCAGTGGCGTGATCTTGGC  51
                                   |.|||||||||||.|||..||||||||||||||||||||.|.|||||.|||
Sbjct 1629  ATACTGTTCTTTTTTTTTTTGAGACGGAGTCTCACTGTGTTGCCCAGGCTGGAGTGCAGTGGTGCGATCTCGGC  1702

Query   52  TCACTGCAACCTCTGCCTCCTGGGTTCAAGCAATTCTCCCACCTCAGCCTCCCAAGTAGCTGGGATTACAGACG  125
            |||||||||.|||.||||||||||||||.||.|||||||..||||||||||||||||||||||||.|||||  |
Sbjct 1703  TCACTGCAAACTCCGCCTCCTGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAG--G  1774

Query  126  TG--TGCCACCATAC-CTGGGTAA-TTTTTGCATTTTTAGTGGAGAGGGAGTTTCACCATGTTGGCCAGGTTGG  195
            ||  .||||||  || ||||.||| ||||||.|||||||||.||||.||.||||||||.||||.||||||.|||
Sbjct 1775  TGCCCGCCACC--ACGCTGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGG  1846

Query  196  TCT-----------------------------------------------------------------------  198
            |||                                                                       
Sbjct 1847  TCTCGATCTCCTGACCTTGTAATCCGCCAGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACCGC  1920

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1921  ACCTGGCAAAATGCTGTTCTTTAAGTCAGCGAACTGAAAAAGTAAAAGACTGCTGGGTGTGGTGGCTCACACCT  1994

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1995  GTAATCCCAACACTTTGAGAGGCTGAGGGGGAAGGATCACCCGAGGTCAGGAGTTTGAGACCAGCCTGGTCAAC  2068

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2069  ATGGCGAAACCCTGTCTCTACTAAAAATACAATAATTAGCTGGGCATGGTGGTGGGCGCCTGTAATCTCAGCTG  2142

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2143  CTTGGGAGGCTGAGGCAGGAGAATCACTTGTACGCAGGAGGCGGAGGTTGCAGTGAGCCAAGATCACACCACTG  2216

Query  199  ----------  198
                      
Sbjct 2217  CACTCCAGCC  2226

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