Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11627
- Subject:
- XM_011239519.2
- Aligned Length:
- 2855
- Identities:
- 1062
- Gaps:
- 1693
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGGAGTCCCGGCGTTCTTCCGCTGGCTCAGCCGCAAGTACCCGTCCATCATTGTCAACTGCGTGGAGGAGAA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GCCAAAAGAATGCAACGGTGTAAAGATTCCAGTTGATGCCAGTAAACCTAATCCAAATGATGTGGAGTTTGATA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ATCTGTATTTGGATATGAATGGGATCATCCACCCCTGCACTCATCCTGAAGACAAACCAGCACCAAAAAATGAA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GATGAAATGATGGTTGCAATTTTTGAGTACATTGACAGACTTTTCAATATTGTAAGACCAAGAAGACTTCTCTA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CATGGCAATAGATGGGGTGGCACCACGTGCAAAAATGAATCAGCAGCGTTCAAGGAGGTTCAGAGCATCAAAGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AAGGAATGGAAGCAGCAGTTGAGAAGCAGCGAGTCAGAGAGGAAATACTTGCAAAAGGTGGCTTTCTTCCTCCA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GAAGAAATAAAAGAAAGATTTGACAGCAACTGTATTACCCCAGGAACTGAGTTCATGGACAATCTTGCTAAATG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CCTTCGCTATTACATAGCTGATCGTTTAAATAATGACCCTGGGTGGAAAAATTTGACAGTTATATTATCTGATG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CTAGTGCACCTGGTGAAGGAGAACACAAAATCATGGATTACATTAGAAGACAAAGAGCCCAGCCTAACCATGAC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CCAAATACTCATCATTGTTTGTGTGGAGCTGATGCTGATCTAATTATGCTTGGTCTTGCTACACATGAACCTAA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CTTCACCATAATCAGAGAAGAATTCAAACCAAATAAACCTAAACCATGTGCTCTTTGTAATCAGTTTGGACACG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AGGTCAAGGATTGTGAAGGTTTGCCAAGAGAAAAGAAGGGAAAGCATGATGAACTTGCAGATAGTCTTCCTTGT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GCAGAAGGGGAGTTTATCTTCCTTCGGCTGAATGTCCTTCGAGAGTATCTGGAAAGAGAACTCACCATGGCCAG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CTTACCATTCCCATTTGATGTGGAGAGGAGCATTGATGACTGGGTGTTCATGTGCTTCTTTGTGGGGAATGATT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TCCTTCCTCACTTGCCATCACTAGAGATTAGGGAAGGTGCAATTGATCGTTTGGTTAACATATACAAAAACGTG 1110
Query 1 ------------------------------------------------------------ATGATCATGTTAGC 14
||||||||||||||
Sbjct 1111 GTACACAAAACTGGGGGTTACCTTACAGAAAGTGGTTATGTCAATCTGCAAAGAGTACAGATGATCATGTTAGC 1184
Query 15 AGTTGGTGAAGTTGAGGATAGCATTTTTAAAAAGAGAAAGGATGATGAGGACAGTTTTAGAAGACGACAGAAAG 88
|||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||
Sbjct 1185 AGTTGGTGAAGTTGAGGATAGCATTTTTAAAAAGAGAAAAGATGATGAGGACAGTTTTAGAAGACGACAGAAAG 1258
Query 89 AAAAAAGAAAGAGAATGAAGAGAGATCAACCAGCTTTCACTCCTAGTGGAATATTAACTCCTCATGCCTTGGGT 162
|||||||||||||.|||||||||||||||||||||||.||||||||||||||||||||.|||||||||||||||
Sbjct 1259 AAAAAAGAAAGAGGATGAAGAGAGATCAACCAGCTTTTACTCCTAGTGGAATATTAACACCTCATGCCTTGGGT 1332
Query 163 TCAAGAAATTCACCAGGTTCTCAAGTAGCCAGTAATCCGAGACAAGCAGCCTATGAAATGAGGATGCAGAATAA 236
|||||||||||||||||||.||||||||||||||||||.|||||||||||||||||||||||||||||||..||
Sbjct 1333 TCAAGAAATTCACCAGGTTGTCAAGTAGCCAGTAATCCAAGACAAGCAGCCTATGAAATGAGGATGCAGAGAAA 1406
Query 237 CTCTAGTCCTTCGATATCTCCTAATACGAGTTTCACATCTGATGGCTCCCCGTCTCCATTAGGAGGAATTAAGC 310
||||||||||||.||||||||||||||.|||||..||||||||||||||||.||||||.||||||||||||||.
Sbjct 1407 CTCTAGTCCTTCAATATCTCCTAATACAAGTTTTGCATCTGATGGCTCCCCATCTCCACTAGGAGGAATTAAGA 1480
Query 311 GAAAAGCAGAAGACAGTGACAGTGAACCTGAGCCAGAGGATAATGTCAGGTTATGGGAAGCTGGCTGGAAGCAG 384
|||||||||||||||||||||||||.||.||||||||||||||.||||||||||||||||||||.||||||||.
Sbjct 1481 GAAAAGCAGAAGACAGTGACAGTGAGCCAGAGCCAGAGGATAACGTCAGGTTATGGGAAGCTGGTTGGAAGCAA 1554
Query 385 CGGTACTACAAGAACAAATTTGATGTGGATGCAGCTGATGAGAAATTCCGTCGGAAAGTTGTGCAGTCGTACGT 458
||.|||||||||||||||||||||||.|||||||||||||||||||||||.||.||.|||||.|||||.|||||
Sbjct 1555 CGATACTACAAGAACAAATTTGATGTAGATGCAGCTGATGAGAAATTCCGACGTAAGGTTGTTCAGTCCTACGT 1628
Query 459 TGAAGGACTTTGCTGGGTTCTTAGATATTATTACCAGGGCTGTGCTTCCTGGAAGTGGTATTATCCATTTCATT 532
|||||||||.||||||||||||.|.||||||||||||||||||||||||||||||||||||||||||||.||||
Sbjct 1629 TGAAGGACTGTGCTGGGTTCTTCGCTATTATTACCAGGGCTGTGCTTCCTGGAAGTGGTATTATCCATTCCATT 1702
Query 533 ATGCACCATTTGCTTCAGACTTTGAAGGCATTGCAGACATGCCATCTGATTTTGAGAAGGGTACGAAACCGTTT 606
|||||||||||||.||||||||||||||.||||||||||||.|.|||||.|||||.|||||.||.|||||||||
Sbjct 1703 ATGCACCATTTGCCTCAGACTTTGAAGGTATTGCAGACATGTCCTCTGAATTTGAAAAGGGCACAAAACCGTTT 1776
Query 607 AAACCACTAGAACAACTTATGGGGGTATTTCCAGCTGCAAGTGGTAATTTTCTACCTCCATCATGGCGGAAGCT 680
||.|||||.||||||||.||||||||.||.|||||||||||||||||.||||||||||||.|||||||||||||
Sbjct 1777 AAGCCACTGGAACAACTAATGGGGGTTTTCCCAGCTGCAAGTGGTAACTTTCTACCTCCAACATGGCGGAAGCT 1850
Query 681 CATGAGTGATCCTGATTCTAGTATAATTGACTTCTATCCTGAAGATTTTGCTATTGATTTGAATGGGAAGAAAT 754
|||||||||.||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 CATGAGTGACCCTGATTCCAGTATAATTGACTTCTATCCTGAAGATTTTGCTATTGATTTGAATGGGAAGAAAT 1924
Query 755 ATGCATGGCAAGGTGTTGCTCTCTTGCCATTCGTGGATGAGCGAAGGCTACGAGCTGCCCTAGAAGAGGTATAC 828
||||||||||||||||||||||.||||||||.|||||||||||||||||.|||||.||.|||||||||||.|||
Sbjct 1925 ATGCATGGCAAGGTGTTGCTCTATTGCCATTTGTGGATGAGCGAAGGCTGCGAGCGGCTCTAGAAGAGGTGTAC 1998
Query 829 CCAGACCTCACTCCAGAAGAGACCAGAAGAAACAGCCTTGGAGGTGATGTCTTATTTGTGGGGAAACATCACCC 902
||||||||||||||||||||||.|||.|||||.||.||||||||||||||.||.||||||||.||||.|||.||
Sbjct 1999 CCAGACCTCACTCCAGAAGAGAACAGGAGAAATAGTCTTGGAGGTGATGTTTTGTTTGTGGGAAAACTTCATCC 2072
Query 903 ACTCCATGACTTCATTTTAGAGCTGTACCAGACAGGTTCCACAGAGCCAGTGGAGGTACCCCCTGAACTATGTC 976
|||.|..||||||||||||||||||||.|||||.|||||||||||||||||.||.||.||.||||||.|.||||
Sbjct 2073 ACTACGCGACTTCATTTTAGAGCTGTATCAGACGGGTTCCACAGAGCCAGTTGATGTGCCACCTGAATTGTGTC 2146
Query 977 ATGGGATTCAAGGAAAGTTTTCTTTGGATGAAGAAGCCATTCTTCCAGATCAAATAGTATGTTCTCCTGTTCCT 1050
|.|||||||||||.|.|||||||||||||||||||||||||||||||||.||||.|||||||||.|||||.||.
Sbjct 2147 ACGGGATTCAAGGGACGTTTTCTTTGGATGAAGAAGCCATTCTTCCAGACCAAACAGTATGTTCCCCTGTGCCC 2220
Query 1051 ATGTTAAGGGATCTGACACAGAACACTGTAGTCAGTATTAATTTTAAAGACCCACAGTTTGCTGAAGATTACA- 1123
|||||..||||.||||||||||||||||.|||||| |..|||| ||||
Sbjct 2221 ATGTTGCGGGACCTGACACAGAACACTGCAGTCAG-------------------------GGAGAAG--TACAG 2267
Query 1124 TTTTTAAAGCTGTAATGCTTCCAGGAGCAAGAAAGCCAGCAGCAGTACTGAAACCTAGTGACTGGGAAAAATCC 1197
..||.||||| .||||| ||..||| |||.|| || ||.||||
Sbjct 2268 ACTTGAAAGC---CATGCT--CATAAGC-------CCATCA-CA----------------------AACAATC- 2305
Query 1198 AGCAATGGACGGCAGTGGAAGCCTCAGCTTGGC---TTTAACCGTGACCGGAGGCCTGTGCAC-CTGGATCAGG 1267
||| ||| ||.| |||| .||||.|| |||.||
Sbjct 2306 -----TGG--------------CTC----TGTCAAATTTA---------------TTGTGGACACTGCAT---- 2337
Query 1268 CAGCCTTCAGGACTTTGGGCCATGTGATGCCAAGAGGCTCAGGAACTGGCATTTACAGCAATGCTGCACCACCA 1341
Sbjct 2338 -------------------------------------------------------------------------- 2337
Query 1342 CCTGTGACTTACCAGGGAAACTTATACAGGCCGCTTTTGAGAGGACAAGCCCAGATTCCAAAACTTATGTCAAA 1415
Sbjct 2338 -------------------------------------------------------------------------- 2337
Query 1416 TATGAGGCCCCAGGATTCCTGGCGAGGTCCTCCTCCCCTTTTCCAGCAGCAAAGGTTTGACAGAGGCGTTGGGG 1489
Sbjct 2338 -------------------------------------------------------------------------- 2337
Query 1490 CTGAACCTCTGCTCCCATGGAACCGGATGCTGCAAACCCAGAATGCAGCCTTCCAGCCAAACCAGTACCAGATG 1563
Sbjct 2338 -------------------------------------------------------------------------- 2337
Query 1564 CTAGCTGGGCCTGGTGGGTATCCACCCAGACGAGATGATCGTGGAGGGAGACAGGGATATCCCAGAGAAGGAAG 1637
Sbjct 2338 -------------------------------------------------------------------------- 2337
Query 1638 GAAATACCCTTTGCCACCACCCTCAGGAAGATACAATTGGAAT 1680
Sbjct 2338 ------------------------------------------- 2337
