Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_11636
Subject:
NM_019987.2
Aligned Length:
1895
Identities:
769
Gaps:
1027

Alignment

Query    1  ATGAATAGATACACAACAATCAGGCAGCTCGGGGATGGAACCTACGGTTCCGTCCTGCTGGGAAGAAGCATTGA  74
            |||||||||||||||||.||||.||||||.||||||||.||||||||.||.|||||||||||.|||||||||||
Sbjct    1  ATGAATAGATACACAACGATCAAGCAGCTTGGGGATGGGACCTACGGCTCTGTCCTGCTGGGGAGAAGCATTGA  74

Query   75  GTCTGGGGAGCTGATCGCTATTAAAAAAATGAAAAGAAAATTTTATTCCTGGGAGGAATGCATGAACCTTCGGG  148
            ||||||.||.|||||.||.||||||||||||||||||||.|||||.||||||||.|||||||||||||||||||
Sbjct   75  GTCTGGAGAACTGATTGCCATTAAAAAAATGAAAAGAAAGTTTTACTCCTGGGAAGAATGCATGAACCTTCGGG  148

Query  149  AGGTTAAGTCTTTAAAGAAGCTCAACCATGCCAATGTAGTCAAATTAAAAGAAGTTATCAGGGAAAATGATCAT  222
            ||||||||||||||||||||||.||.|||||||||.|.||.||.||||||||.||||||||||||||.||.|||
Sbjct  149  AGGTTAAGTCTTTAAAGAAGCTTAATCATGCCAATATCGTAAAGTTAAAAGAGGTTATCAGGGAAAACGACCAT  222

Query  223  CTTTATTTTATCTTCGAGTACATGAAGGAAAATCTTTACCAGCTCATTAAAGAGAGAAATAAGTTGTTTCCTGA  296
            |||||.||||||||||||||||||||||||||.||||||||||||||||||||.|||||||||||||||||.||
Sbjct  223  CTTTACTTTATCTTCGAGTACATGAAGGAAAACCTTTACCAGCTCATTAAAGAAAGAAATAAGTTGTTTCCAGA  296

Query  297  GTCTGCTATAAGGAATATCATGTATCAGATATTACAAGGACTCGCATTTATTCACAAACACGGCTTCTTTCATC  370
            ||||||||||||||||||.|||||.||||||||.||||||||.|||||.||||||||||||||.|||||.||.|
Sbjct  297  GTCTGCTATAAGGAATATAATGTACCAGATATTGCAAGGACTGGCATTCATTCACAAACACGGTTTCTTCCACC  370

Query  371  GAGACTTAAAGCCTGAGAACCTCCTCTGCATGGGACCAGAACTTGTGAAAATTGCAGACTTTGGTTTGGCCCGA  444
            |.||||||||.||.||||||||||||||||||||||||||||||||||||||.||.||||||||.|||||.|||
Sbjct  371  GGGACTTAAAACCCGAGAACCTCCTCTGCATGGGACCAGAACTTGTGAAAATCGCCGACTTTGGATTGGCTCGA  444

Query  445  GAAATACGATCAAAACCTCCATATACAGATTATGTATCTACCAGATGGTACAGGGCTCCAGAAGTACTCCTGAG  518
            |||||.|||||||.||||||.||.|||||.|||||.|||||.||||||||||||||||||||.|||||.|||||
Sbjct  445  GAAATCCGATCAAGACCTCCGTACACAGACTATGTGTCTACTAGATGGTACAGGGCTCCAGAGGTACTGCTGAG  518

Query  519  GTCTACCAACTACAGCTCCCCCATTGACGTCTGGGCGGTGGGCTGCATCATGGCAGAAGTTTACACCCTCAGGC  592
            .||.||||||||||||||||||||||||.||||||||||.||||||||||||||.||.||.|||||.|||.|||
Sbjct  519  ATCCACCAACTACAGCTCCCCCATTGACATCTGGGCGGTAGGCTGCATCATGGCGGAGGTGTACACGCTCCGGC  592

Query  593  CACTCTTCCCTGGAGCCAGTGAAATTGACACAATATTCAAAATTTGCCAAGTGCTGGGGACACCAAAAAAGACT  666
            |.||.||||||||.||||||||||||||||||||.||||||||||||||||||.||||.||||||||.||||||
Sbjct  593  CCCTTTTCCCTGGGGCCAGTGAAATTGACACAATTTTCAAAATTTGCCAAGTGTTGGGAACACCAAAGAAGACT  666

Query  667  GACTGGCCTGAAGGCTATCAACTTTCAAGTGCAATGAACTTCCGTTGGCCACAGTGTGTACCCAATAACTTAAA  740
            |||||||||||||||||.||.||.||||||||.|||||.||||..|||||.|||||..||||||||||||||||
Sbjct  667  GACTGGCCTGAAGGCTACCAGCTGTCAAGTGCTATGAATTTCCTCTGGCCCCAGTGCATACCCAATAACTTAAA  740

Query  741  GACCTTGATTCCCAATGCTAGCAGTGAAGCAGTCCAGCTCCTGAGAGACATGCTTCAGTGGGATCCCAAGAAAC  814
            |||..|.||.||.|||||||||||.|||||..|.|||||||||||||||.||||||||||||||||||||||||
Sbjct  741  GACTCTAATCCCAAATGCTAGCAGCGAAGCCATTCAGCTCCTGAGAGACTTGCTTCAGTGGGATCCCAAGAAAC  814

Query  815  GACCAACAGCTAGTCAGGTTTTCTTCCATTTTCTTGTTATAACGTTCATATCTAAC---------------TCT  873
            |||||||.||||||||||  .|||||.||.|.|||      ||.|.||.|||..||               ||.
Sbjct  815  GACCAACCGCTAGTCAGG--CTCTTCGATATCCTT------ACTTCCAGATCGGACACCCACTGGGCATCATCA  880

Query  874  GAA-----------------------------------------------------------------------  876
            |.|                                                                       
Sbjct  881  GCAAGGACTCAGGAAAACCACAGAGAGAGGTCCAGGACAAGACAGGCCCTCCTCCTTACATCAAGCCAGCCCCT  954

Query  877  --------------------------------------------------------------------------  876
                                                                                      
Sbjct  955  CCTGCCCAGGCCCCGGCCAAGGCATATACGCTGATTTCTTCACGACCAAGCCAAGCCAGTCAGCCCCCTCAGCA  1028

Query  877  --------------------------------------------------------------------------  876
                                                                                      
Sbjct 1029  TTCTGTGCACCCCTACAAAGGCGATGTCTCTAGGACTGAGCAGCTGAGCCATGTTCAGGAGGGCAAGCCAAGCC  1102

Query  877  --------------------------------------------------------------------------  876
                                                                                      
Sbjct 1103  CTCCATTCTTCCCATCCCTCCACAATAAGAATCTTCAGCCAAAAATCCTAGCCAGCCTGGAACAGAAAAATGGT  1176

Query  877  --------------------------------------------------------------------------  876
                                                                                      
Sbjct 1177  GAAATCAAGCCAAAGAGCAGGAGAAGATGGGGTCTCATCTCCAGGTCGACAAAGGGTTCTGACGACTGGGCCGA  1250

Query  877  --------------------------------------------------------------------------  876
                                                                                      
Sbjct 1251  CTTGGATGACTTAGACTTCAGTCCCTCTCTCACCAGGATAGATGTAAAAAACAAGAAGAGACAGAGTGATGACA  1324

Query  877  --------------------------------------------------------------------------  876
                                                                                      
Sbjct 1325  CCCTCTGCAGGTTTGAAAGTGTTCTGGACCTGAAGCCATCTGAGTCAGTGGGTACAGGAACCACTGTCTCCACG  1398

Query  877  --------------------------------------------------------------------------  876
                                                                                      
Sbjct 1399  CAGGCTTCCTCGCAGAGGAGAGACACGCCGACCCTGCAGTCCTCAGCAAAGCAGCACTACTTGAAGCACTCTCG  1472

Query  877  --------------------------------------------------------------------------  876
                                                                                      
Sbjct 1473  CTACTTGCCTGGAATAAATATAAGAAATGGCGTGCTCCCAAATCCAGGCAAGGACTTTCTTCCATCAAATTCAT  1546

Query  877  --------------------------------------------------------------------------  876
                                                                                      
Sbjct 1547  GGTCCAGTTCCGGCTTGTCTGGAAAATCTTCAGGAACAGTATCAGTAGTGAGCAAAATAACTTCAGTTGGCTCA  1620

Query  877  --------------------------------------------------------------------------  876
                                                                                      
Sbjct 1621  GGCTCTGCGAGCTCTAGTGGACTGACTGGAAGCTACATTCCTTCCTTTCTGAAAAAGGAAATCGGTTCTGTCAT  1694

Query  877  --------------------------------------------------------------------------  876
                                                                                      
Sbjct 1695  GCAGAGGGTTCAGCTGGCGCCCCTCGCAGCCCCTCCCCCCGGCTACTCTTCCCTCAAGGCCGTGAGACCTCACC  1768

Query  877  --------------------------------------------------------------------------  876
                                                                                      
Sbjct 1769  CGGGGAGGCCTTTCTTTCACACCCAGCCCAGGAGCACGCCCGGCTTGATCCCCCGACCTCCAGCTGCTCAGCCT  1842

Query  877  ---------------------------------------------  876
                                                         
Sbjct 1843  GTGCACGGCAGGATAGACTGGTCTTCCAAGTACCCATCCCGGCGG  1887

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