Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_11646
Subject:
XM_006512305.3
Aligned Length:
3582
Identities:
1334
Gaps:
2079

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGTTCAGCTTGGACTCATTCAGAAAAGATCGGACCCAGCACAGGCAGCGTCAATGCAAGCTTCCCCCACCCCG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TCTTCCACCCATGTGTGTCAACCCTGCCCCTGGAGGGACCATCACTCGAGCTTCTAGGGACCTATTAAAAGAGT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TTCCGCAGCCTAAAAACCTTCTCAACAGCGTGATTGGAAGAGCCCTTGGCATCTCACATGCAAAAGACAAGTTA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GTCTATGTGCACACGAATGGACCGAAGAAAAAGAAAGTCACCCTGCACATAAAGTGGCCCAAGAGCGTGGAGGT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GGAAGGCTATGGCAGCAAGAAGATTGATGCTGAGCGTCAGGCTGCAGCAGCTGCCTGCCAACTCTTCAAGGGCT  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GGGGTCTGCTGGGACCACGGAATGAGCTGTTTGATGCAGCTAAATACCGAGTGCTAGCTGATCGTTTTGGGTCT  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  CCAGCTGACAGCTGGTGGCGCCCAGAACCCACCATGCCTCCAACTTCCTGGCGGCAGCTGAATCCTGAGAACAT  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  TCGGCCAGGGGGTCCTGCAGGACTATCCCGATCCTTAGGCCGAGAGGAAGAGGAAGATGAGGAGGAAGAGCTAG  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  AAGAGGGGACCATTGATGTGACAGAGTTTCTGTCTATGACCCAGCAAGACTCCCACAACCCACTCAGGGACTCA  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  AGGGGGGGCTCCTTTGAAATGACAGATGATGACAGTGCTATCAGAGCTCTGACCCAGTTTCCACTTCCCAAGAA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  CCTCCTGGCCAAAGTGATTCAGATTGCAACCTCCTCCTCCACAGCTAAGAATCTCATGCAGTTCCATACTGTGG  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  GTACCAAGACCAAGCTGGCTACACTCACTCTGCTCTGGCCCTGTCCCATGACCTTTGTTGCCAAAGGGCGACGC  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  AAAGCTGAGGCTGAGAATAAGGCAGCAGCCTTGGCTTGCAAGAAACTGAAGAGCCTTGGCCTTGTGGACAGGAA  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  CAATGAGCCGCTTACCCATGCCATGTACAACCTGGCCTCCCTGCGTGAGTTGGGTGAGACCCAGCGCCGGCCAT  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  GTACCATCCAGGTGCCTGAGCCCATCCTTCGCAAGATAGAGGCCTTCCTGAGTCATTACCCGGTGGACAGCTCA  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  TGGATTTCCCCAGAACTCCGACTGCAGAGTGATGACATCTTGCCCTTAGGCAAGGACTCAGGGCCCTTGAGTGA  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  CCCTATCACAGGCAAGCCATACATGCCCCTGTCAGAAGCAGAGGAGGTGCGCTTAAGCCAGAGCCTGCTAGAGC  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  TGTGGCGGAGGAGAGGGCCGATCTGGCAGGAGGCCCCGCAGCTACCTGTAGACCCTCATCGGGACACTATCCTC  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  AGTGCCATTGAACAACACCCAGTGGTAGTCATCTCTGGGGACACAGGCTGTGGGAAGACCACACGTATCCCTCA  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  GCTGCTATTGGAGCGCTATGTGACTGAGGGTCGAGGTGCCCGCTGCAATGTGATCATCACACAACCTCGCCGGA  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  TCTCAGCTGTGTCTGTGGCACAGCGGGTCAGCCATGAACTGGGCCCCTCCTTGCGCCGGAATGTGGGCTTCCAG  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  GTACGCTTGGAAAGTAAGCCCCCAGCCCGAGGTGGGGCGCTGCTCTTCTGCACTGTGGGTATCCTGCTTCGGAA  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  GCTGCAGAGCAACCCCAGCCTGGAGGGTGTGAGCCATGTCATTGTGGATGAGGTCCATGAGCGGGATGTGAACA  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  CAGACTTCCTGCTGATTCTGCTCAAGGGCCTGCAGCGGCTCAACCCAGCTCTTCGGCTGGTGCTCATGAGTGCT  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  ACAGGAGATAATGAGCGCTTTTCCCGATACTTTGGGGGCTGCCCTGTTATCAAGGTACCTGGCTTCATGTATCC  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  CGTCAAGGAACACTACCTGGAGGACATCTTGGCCAAGCTGGGTAAACATCAGTACCCACACCGGCATCGGCACC  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  ATGAGTCGGAAGATGAATGTGCACTTGATTTGGACCTTGTGACTGACCTGGTTCTGCATATCGATGCCCGTGGG  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  GAACCAGGTGGGATCCTGTGCTTTCTACCTGGCTGGCAAGAAATCAAAGGAGTGCAACAACGGCTCCAGGAGGC  2072

Query    1  -------ATGCACGAGAGCAAGTACCTCATCCTGCCAGTGCACTCCAACATCCCCATGATGGATCAGAAGGCCA  67
                   |||||.||.|||||||||||||||.|.||||||||||||||.||||||||||||||.||||||||||
Sbjct 2073  CCTGGGCATGCATGAAAGCAAGTACCTCATCTTACCAGTGCACTCCAATATCCCCATGATGGACCAGAAGGCCA  2146

Query   68  TATTCCAGCAGCCTCCAGTTGGGGTGCGCAAGATTGTCTTGGCCACCAACATTGCTGAGACTTCCATCACAATC  141
            |||||||.|||||||||.|||||||.|||||||||||.||||||||||||||||||||.||.|||||||||.|.
Sbjct 2147  TATTCCAACAGCCTCCACTTGGGGTACGCAAGATTGTATTGGCCACCAACATTGCTGAAACCTCCATCACAGTT  2220

Query  142  AATGACATCGTGCATGTGGTGGACAGTGGGCTGCACAAGGAAGAACGCTATGACCTGAAGACCAAGGTGTCCTG  215
            ||.|||||.||.|||||.||||||||.||.|||||||||||.||||||||||||||||||||||||||||||||
Sbjct 2221  AACGACATTGTACATGTCGTGGACAGCGGTCTGCACAAGGAGGAACGCTATGACCTGAAGACCAAGGTGTCCTG  2294

Query  216  CCTGGAGACAGTGTGGGTATCAAGAGCCAATGTGATCCAGCGCCGGGGCCGGGCGGGCCGCTGCCAGTCCGGCT  289
            |||||||||.||||||||.||.|||||.|||||.||.||||||||||||.||||.||||||||||||||.||.|
Sbjct 2295  CCTGGAGACTGTGTGGGTGTCGAGAGCAAATGTCATTCAGCGCCGGGGCAGGGCAGGCCGCTGCCAGTCAGGTT  2368

Query  290  TTGCCTACCACTTGTTCCCTCGAAGCCGGCTGGAGAAAATGGTCCCTTTCCAAGTGCCAGAGATCCTGCGCACA  363
            |||||||||||||||||||..|.||||||||||||||||||||.||||||||||||||||||||||||||||||
Sbjct 2369  TTGCCTACCACTTGTTCCCGAGGAGCCGGCTGGAGAAAATGGTTCCTTTCCAAGTGCCAGAGATCCTGCGCACA  2442

Query  364  CCTCTTGAGAACCTGGTGCTGCAAGCGAAAATCCACATGCCTGAGAAGACGGCGGTGGAGTTCCTGTCCAAGGC  437
            ||||||||||||||||||||||||||.||||||||.|||||||||||||||||.|||||||||||.||.|||||
Sbjct 2443  CCTCTTGAGAACCTGGTGCTGCAAGCCAAAATCCATATGCCTGAGAAGACGGCAGTGGAGTTCCTCTCTAAGGC  2516

Query  438  TGTGGACAGTCCAAACATCAAGGCAGTGGACGAGGCTGTGATCTTGCTCCAGGAGATCGGGGTGCTGGACCAGC  511
            |||||||||||||||.||||||||||||||.|||||.||||||.|||||||||||||.||||||||||||||||
Sbjct 2517  TGTGGACAGTCCAAATATCAAGGCAGTGGATGAGGCCGTGATCCTGCTCCAGGAGATTGGGGTGCTGGACCAGC  2590

Query  512  GGGAGTACCTGACTACCCTGGGGCAGCGCCTGGCTCACATCTCCACCGACCCCCGGTTGGCCAAGGCCATTGTG  585
            |||||||.|||||.|||.||||.|||||||||||.||||||||.||.||||||||..|||||||||||||.|||
Sbjct 2591  GGGAGTATCTGACCACCTTGGGACAGCGCCTGGCCCACATCTCTACTGACCCCCGACTGGCCAAGGCCATAGTG  2664

Query  586  TTGGCTGCCATCTTCCGTTGCCTGCACCCACTACTGGTGGTCGTTTCCTGCCTCACCCGGGACCCCTTCAGCAG  659
            ||||||||||||||||||||||||||||||||.||||||||.|||||||||||.||||||||||||||||||||
Sbjct 2665  TTGGCTGCCATCTTCCGTTGCCTGCACCCACTGCTGGTGGTTGTTTCCTGCCTTACCCGGGACCCCTTCAGCAG  2738

Query  660  CAGCCTACAGAACCGGGCAGAGGTGGACAAGGTGAAAGCACTGTTGAGCCATGACAGCGGCAGTGACCACCTGG  733
            |||..|.||||||||||||||.||.|||||||||||.|||.||.|||||||||||||.|||||||||||..|||
Sbjct 2739  CAGTTTGCAGAACCGGGCAGAAGTAGACAAGGTGAAGGCATTGCTGAGCCATGACAGTGGCAGTGACCATTTGG  2812

Query  734  CCTTTGTGCGGGCTGTCGCCGGCTGGGAGGAGGTGCTGCGTTGGCAGGACCGCAGCTCCCGGGAGAATTACCTG  807
            ||||.|||||||||||.||.||||||||||||||.|||||.|||||||||||.|.||||.||||.||.||||||
Sbjct 2813  CCTTCGTGCGGGCTGTGGCTGGCTGGGAGGAGGTACTGCGCTGGCAGGACCGTACCTCCAGGGAAAACTACCTG  2886

Query  808  GAGGAAAACCTGCTGTACGCACCCAGCCTGCGCTTCATCCACGGACTCATCAAGCAGTTCTCAGAGAACATTTA  881
            ||.||||||||.|||||.||.||||||.||||||||||||||||.|||||||||||||||||||||||||||||
Sbjct 2887  GAAGAAAACCTTCTGTATGCCCCCAGCTTGCGCTTCATCCACGGGCTCATCAAGCAGTTCTCAGAGAACATTTA  2960

Query  882  TGAGGCCTTCCTGGTGGGGAAGCCCTCGGACTGCACCCTGGCCTCCGCCCAGTGCAACGAGTACAGTGAGGAGG  955
            ||||||.|||||.||||||||||||||.||||||||.|||.||||.||.||||||||.||||||||.|||||.|
Sbjct 2961  TGAGGCTTTCCTAGTGGGGAAGCCCTCTGACTGCACACTGCCCTCTGCTCAGTGCAATGAGTACAGCGAGGAAG  3034

Query  956  AGGAGCTGGTGAAGGGCGTGCTGATGGCCGGCCTCTACCCCAACCTCATCCAGGTGAGGCAGGGCAAGGTCACC  1029
            ||||||||||||||||.|||||||||||.|||||||||||||||||||||||||||||.||.||.|||||.||.
Sbjct 3035  AGGAGCTGGTGAAGGGTGTGCTGATGGCTGGCCTCTACCCCAACCTCATCCAGGTGAGACAAGGTAAGGTTACT  3108

Query 1030  CGGCAGGGGAAGTTCAAGCCCAACAGCGTCACATATAGGACCAAATCAGGCAACATCCTGCTGCACAAGTCGAC  1103
            |||||.||.||||||||.||||||||.|||||.||.|||||||||||.|||||||||.|||||||.|||||.||
Sbjct 3109  CGGCAAGGCAAGTTCAAACCCAACAGTGTCACTTACAGGACCAAATCTGGCAACATCTTGCTGCATAAGTCAAC  3182

Query 1104  CATTAACAGGGAGGCCACACGGTTACGGAGCCGATGGCTGACGTATTTCATGGCAGTCAAGTCCAATGGCAGCG  1177
            |||||||||||||||.||.|||||||||||||||||||||||.|||||||||||.||||||||||||||.||||
Sbjct 3183  CATTAACAGGGAGGCTACCCGGTTACGGAGCCGATGGCTGACATATTTCATGGCCGTCAAGTCCAATGGTAGCG  3256

Query 1178  TCTTCGTCCGGGACTCCTCTCAGGTGCACCCGCTAGCTGTGCTGCTGCTGACCGACGGGGACGTGCACATCCGT  1251
            ||||.||.||.||.|||||.|||||||||||.|||||||||.||||.||.||.||.|||||||||||||||||.
Sbjct 3257  TCTTTGTTCGAGATTCCTCCCAGGTGCACCCACTAGCTGTGTTGCTCCTAACAGATGGGGACGTGCACATCCGA  3330

Query 1252  GATGACGGGCGCCGGGCCACCATCTCACTGAGCGACAGTGACCTGCTGCGGCTGGAGGGTGACTCGCGTACCGT  1325
            |||||.|||||.|||||||||||||||.||||.|||||.||||||||.||||||||.|||||.||.||.||.||
Sbjct 3331  GATGATGGGCGTCGGGCCACCATCTCATTGAGTGACAGCGACCTGCTTCGGCTGGAAGGTGATTCACGAACTGT  3404

Query 1326  GTGGCTGCTGAAGGAGCTGCGGCGGGCCCTGGGCCGCATGGTGGAGCGGAGCCTGCGCAGCGAGCTGGCTGCAC  1399
            |.||.||||.|.||||.|.||.||.|||||.||.||.|||||||||||||||||.|||||||||.|.|||||||
Sbjct 3405  GCGGTTGCTAAGGGAGTTTCGTCGAGCCCTAGGACGGATGGTGGAGCGGAGCCTCCGCAGCGAGTTAGCTGCAC  3478

Query 1400  TTCCCCCCAGCGTACAGGAGGAGCACGGGCAGCTGCTTGCGCTACTGGCAGAGCTGCTGCGAGGACCCTGTGGC  1473
            ||||.|..||.||.|||.|.||.|||||||||||||||||.||.|||||||||.||||.||||||||.||||||
Sbjct 3479  TTCCTCTTAGTGTGCAGCAAGAACACGGGCAGCTGCTTGCACTGCTGGCAGAGTTGCTTCGAGGACCTTGTGGC  3552

Query 1474  AGCTTTGATGTGCGCAAGACAGCTGACGAC  1503
            |||||||||.||||||||||||||||.|||
Sbjct 3553  AGCTTTGATATGCGCAAGACAGCTGATGAC  3582

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