Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11657
- Subject:
- NM_001289124.2
- Aligned Length:
- 2751
- Identities:
- 459
- Gaps:
- 2292
Alignment
Query 1 ATGGATTCCGAAAGACAAGTCAAGGTTAAGGACACTGATGACATTGAAAGTCCTAAACGCAGTATCCGAGACAG 74
||| ||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATG-----CGA----------------AAGGACACTGATGACATTGAAAGTCCTAAACGCAGTATCCGAGACAG 53
Query 75 TGGCTACATCGACTGCTGGGATTCCGAGCGCAGCGACTCCCTCTCTCCTCCTCGCCACGGCAGAGATGATTCCT 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 54 TGGCTACATCGACTGCTGGGATTCCGAGCGCAGCGACTCCCTCTCTCCTCCTCGCCACGGCAGAGATGATTCCT 127
Query 149 TCGACAGCCTGGATTCCTTTGGCTCTCGCTCTCGGCAGACGCCTTCACCAGATGTAGTCCTCAGGGGAAGCAGC 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 128 TCGACAGCCTGGATTCCTTTGGCTCTCGCTCTCGGCAGACGCCTTCACCAGATGTAGTCCTCAGGGGAAGCAGC 201
Query 223 GATGGGAGAGGAAGCGACTCTGAATCCGACTTGCCTCATCGGAAGCTGCCAGATGTGAAGAAGGATGACATGTC 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 202 GATGGGAGAGGAAGCGACTCTGAATCCGACTTGCCTCATCGGAAGCTGCCAGATGTGAAGAAGGATGACATGTC 275
Query 297 TGCACGGCGGACTTCCCATGGTGAGCCGAAATCAGCAGTGCCTTTTAACCAGTACCTCCCGAACAAAAGCAATC 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 276 TGCACGGCGGACTTCCCATGGTGAGCCGAAATCAGCAGTGCCTTTTAACCAGTACCTCCCGAACAAAAGCAATC 349
Query 371 AGACGGCCTACGTCCCCGCGCCTCTGAGAAAGAAGAAAGCAGAGAGAGAGGAATACCGCAAGAGCTGGAGTACC 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 350 AGACGGCCTACGTCCCCGCGCCTCTGAGAAAGAAGAAAGCAGAGAGAGAGGAATACCGCAAGAGCTGGAGTACC 423
Query 445 GCCACCTCCCCGCTGGGTGGGGAGAGGCCCTTCAGG-------------------------------------- 480
||||||||||||||||||||||||||||||||||||
Sbjct 424 GCCACCTCCCCGCTGGGTGGGGAGAGGCCCTTCAGGAGCACCAGCATGTTTGACATGCGGTGTGAGGAGGAGGC 497
Query 481 -------------------------------------------------------------------------- 480
Sbjct 498 CGCGGTGCAGCCGCACAGCAGGGCCCGCCAGGAGCAGCTGCAGCTGATAAATAACCAGCTGAGGGAAGAGGACG 571
Query 481 -------------------------------------------------------------------------- 480
Sbjct 572 ACAAATGGCAAGATGACCTGGCTCGTTGGAAGAGTCGTAGAAGAAGTGTTTCTCAGGACTTAATCAAGAAAGAG 645
Query 481 -------------------------------------------------------------------------- 480
Sbjct 646 GAAGAAAGGAAAAAAATGGAGAAGTTACTGGCTGGAGAAGATGGGACAAGTGAACGAAGGAAAAGCATCAAAAC 719
Query 481 -------------------------------------------------------------------------- 480
Sbjct 720 CTACAGAGAAATTGTTCAAGAAAAAGAGCGGAGAGAGAGAGAGCTGCATGAAGCATATAAGAACGCTCGGTCCC 793
Query 481 -------------------------------------------------------------------------- 480
Sbjct 794 AGGAGGAGGCAGAGGGGATCCTTCAACAGTACATTGAGAGGTTCACCATCAGTGAGGCTGTTCTCGAACGCTTG 867
Query 481 -------------------------------------------------------------------------- 480
Sbjct 868 GAGATGCCAAAAATTCTGGAAAGAAGCCATTCAACAGAGCCAAATTTATCCTCCTTCCTGAATGACCCCAATCC 941
Query 481 -------------------------------------------------------------------------- 480
Sbjct 942 CATGAAATACCTGCGGCAACAGTCACTGCCTCCACCCAAATTCACTGCCACTGTTGAAACCACCATTGCTCGTG 1015
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1016 CCAGTGTTCTGGATACCAGCATGTCAGCAGGCAGTGGGTCTCCAAGCAAAACTGTCACTCCCAAAGCAGTGCCT 1089
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1090 ATGCTGACACCCAAGCCTTACTCCCAGCCCAAAAATTCTCAAGATGTTCTGAAGACCTTTAAGGTAGACGGGAA 1163
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1164 AGTCAGTGTGAATGGAGAGACGGTTCATAGAGAGGAGGAGAAGGAAAGAGAGTGTCCCACGGTGGCACCTGCCC 1237
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1238 ACTCCTTAACCAAATCCCAGATGTTTGAAGGTGTGGCCAGAGTGCACGGGTCTCCACTGGAGCTGAAACAAGAC 1311
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1312 AACGGTAGCATCGAGATCAACATAAAGAAGCCAAACTCTGTTCCCCAAGAGCTCGCAGCAACCACTGAGAAAAC 1385
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1386 GGAACCGAATAGTCAAGAGGACAAGAATGATGGTGGAAAATCAAGAAAAGGGAATATAGAACTTGCCTCATCAG 1459
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1460 AACCACAGCATTTTACAACAACTGTGACTCGATGCAGCCCGACCGTGGCCTTTGTGGAATTTCCCTCCAGCCCC 1533
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1534 CAGCTGAAGAATGATGTGTCGGAAGAAAAAGACCAGAAGAAACCAGAAAATGAAATGAGTGGAAAGGTGGAGTT 1607
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1608 GGTGCTGTCACAAAAGGTGGTAAAGCCAAAATCTCCAGAACCCGAAGCAACGCTGACATTTCCATTTCTGGACA 1681
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1682 AAATGCCTGAAGCCAACCAACTACATTTGCCAAATCTCAATTCTCAAGAGTCGCCTGGCACTGCCAGTGTTCCG 1755
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1756 CTTAGAGTTCAGAACTCTTGGCGACGATCCCAGTTTTTCTCCCAGTCAGTGGATTCTCCAAGCAGTGAGAAGTC 1829
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1830 ACCTGTTATGACACCTTTTAAGTTCTGGGCATGGGACCCAGAAGAGGAGCGCAGGCGACAGGAAAAATGGCAAC 1903
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1904 AGGAACAGGAACGTTTGCTCCAGGAGAGATACCAGAAGGAGCAGGACAAGCTGAAAGAAGAGTGGGAAAAGGCC 1977
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1978 CAAAAGGAGGTGGAAGAGGAAGAACGCAGATACTATGAGGAGGAGCGTAAGATAATTGAAGACACTGTGGTTCC 2051
Query 481 -------------------------------------------------------------------------- 480
Sbjct 2052 ATTTACTGTTTCTTCAAGTTCCGCTGACCAGCTGTCTACCTCTTCCTCCATGACTGAAGGCAGTGGGACAATGA 2125
Query 481 -------------------------------------------------------------------------- 480
Sbjct 2126 ATAAGATAGACCTGGGAAACTGTCAAGATGAAAAACAAGACAGAAGATGGAAGAAATCATTCCAGGGAGATGAC 2199
Query 481 -------------------------------------------------------------------------- 480
Sbjct 2200 AGTGACTTATTGCTGAAGACTAGGGAAAGTGATCGACTGGAGGAGAAGGGCAGCCTAACTGAAGGGGCCTTGGC 2273
Query 481 -------------------------------------------------------------------------- 480
Sbjct 2274 TCATTCTGGGAACCCTGTATCAAAAGGAGTCCATGAAGACCATCAGCTGGATACCGAGGCTGGGGCCCCACACT 2347
Query 481 -------------------------------------------------------------------------- 480
Sbjct 2348 GTGGAACAAACCCACAGCTTGCTCAGGATCCATCCCAGAATCAGCAGACATCAAATCCAACGCACAGTTCAGAA 2421
Query 481 -------------------------------------------------------------------------- 480
Sbjct 2422 GATGTGAAGCCAAAAACCCTCCCGCTGGATAAAAGCATTAACCATCAGATCGAGTCTCCCAGTGAAAGGCGGAA 2495
Query 481 -------------------------------------------------------------------------- 480
Sbjct 2496 GTCTATAAGTGGAAAGAAGCTGTGCTCTTCCTGTGGGCTTCCTTTGGGTAAAGGAGCTGCAATGATCATCGAGA 2569
Query 481 -------------------------------------------------------------------------- 480
Sbjct 2570 CCCTCAATCTCTATTTTCACATCCAGTGTTTCAGGTGTGGAATTTGTAAAGGCCAGCTTGGAGATGCAGTGAGT 2643
Query 481 -------------------------------------------------------------------------- 480
Sbjct 2644 GGGACGGATGTTAGGATTCGAAATGGTCTCCTGAACTGTAATGATTGCTACATGCGATCCAGAAGTGCCGGGCA 2717
Query 481 ------------- 480
Sbjct 2718 GCCTACAACATTG 2730
