Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11657
- Subject:
- XM_011513643.1
- Aligned Length:
- 4962
- Identities:
- 473
- Gaps:
- 4482
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGCTTGTCCCGCTCTCGGTCTGGAAGCTCTTCAGCCCCTGCAGCCCGAGCCGCCCCCCGAGCCCGCCTTCTC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CGAGGCGCAGAAGTGGATTGAGCAAGTAACTGGCAGAAGTTTTGGTGATAAAGATTTTCGGACAGGTTTAGAAA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ATGGAATCCTCCTCTGCGAGTTGCTGAATGCTATAAAGCCAGGACTTGTTAAAAAGATCAATAGATTGCCTACC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCCATTGCAGGACTGGACAATATTATCTTATTCTTGAGAGGTTGTAAAGAGCTCGGCCTTAAAGAATCTCAACT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TTTTGACCCGAGTGACCTCCAGGATACATCCAACAGAGTAACAGTCAAGAGCCTTGATTATAGTAGGAAGCTGA 370
Query 1 ----------------------------------------------ATGGA-TTCC-------GAAAGAC---- 16
.||.| .||| |||.|||
Sbjct 371 AAAATGTATTAGTTACCATTTACTGGCTGGGAAAAGCAGCAAACAGCTGCACATCCTACAGCGGAACGACACTA 444
Query 17 ------AAG-----TCAAGGTT-----------------AAGGACACTGATGACATTGAAAGTCCTAAACGCAG 62
||| |.||||.| |||||||||||||||||||||||||||||||||||
Sbjct 445 AACCTGAAGGAGTTTGAAGGATTGTTGGCTCAGATGCGAAAGGACACTGATGACATTGAAAGTCCTAAACGCAG 518
Query 63 TATCCGAGACAGTGGCTACATCGACTGCTGGGATTCCGAGCGCAGCGACTCCCTCTCTCCTCCTCGCCACGGCA 136
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TATCCGAGACAGTGGCTACATCGACTGCTGGGATTCCGAGCGCAGCGACTCCCTCTCTCCTCCTCGCCACGGCA 592
Query 137 GAGATGATTCCTTCGACAGCCTGGATTCCTTTGGCTCTCGCTCTCGGCAGACGCCTTCACCAGATGTAGTCCTC 210
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GAGATGATTCCTTCGACAGCCTGGATTCCTTTGGCTCTCGCTCTCGGCAGACGCCTTCACCAGATGTAGTCCTC 666
Query 211 AGGGGAAGCAGCGATGGGAGAGGAAGCGACTCTGAATCCGACTTGCCTCATCGGAAGCTGCCAGATGTGAAGAA 284
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 AGGGGAAGCAGCGATGGGAGAGGAAGCGACTCTGAATCCGACTTGCCTCATCGGAAGCTGCCAGATGTGAAGAA 740
Query 285 GGATGACATGTCTGCACGGCGGACTTCCCATGGTGAGCCGAAATCAGCAGTGCCTTTTAACCAGTACCTCCCGA 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GGATGACATGTCTGCACGGCGGACTTCCCATGGTGAGCCGAAATCAGCAGTGCCTTTTAACCAGTACCTCCCGA 814
Query 359 ACAAAAGCAATCAGACGGCCTACGTCCCCGCGCCTCTGAGAAAGAAGAAAGCAGAGAGAGAGGAATACCGCAAG 432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 ACAAAAGCAATCAGACGGCCTACGTCCCCGCGCCTCTGAGAAAGAAGAAAGCAGAGAGAGAGGAATACCGCAAG 888
Query 433 AGCTGGAGTACCGCCACCTCCCCGCTGGGTGGGGAGAGGCCCTTCAGG-------------------------- 480
|||||||||||||||||||||||||||||||||||||||||||||||.
Sbjct 889 AGCTGGAGTACCGCCACCTCCCCGCTGGGTGGGGAGAGGCCCTTCAGCTTTCCTGAAACGATAGAGGAAGAGGG 962
Query 481 -------------------------------------------------------------------------- 480
Sbjct 963 GAGTGAAGTGGGGTCTGCTGGTGAAGACAACCCAGCTGGCCAAATGAATCCTGGTTGGAAGCCTTCCGATGGTG 1036
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1037 GGTGTGAATTACCTGACGGCAGTGGTAAGGAGCACCCTTCTTCAGACGGGGCTGTGGTGGCACCAGCTCCCAAG 1110
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1111 TCTGAAGAAAAAGATGCTGCTGAGATCCAAAAGCGCAAAAGGCTAGAGCAAGCTGGAATCAAGGTCATGCCAGC 1184
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1185 AGCACAGCGCTTTGCCAGTCAAAAACAATTAAGTGAAGAGAAAGAAGCTATTCGTGATATTGTCCTTCGCAAAG 1258
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1259 AAAACTCTTTCCTGACCCACCAACATGGCAACGATTCAGAGGCAGAAGGTGAAGTTGTGTGTCGACTGCCTGAT 1332
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1333 CTTGAGAAGGATGACTTTGCTGCAAGGAGAGCAAGGATGAACCAAACCAAGCCAATGGTGCCATTAAATCAACT 1406
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1407 CCTCTATGGCCCTTATCCAAAGAAAGGGGCAGAGAAATCAGATGGCAGCAAACAGCTCTCAAAGGGAATCTCAA 1480
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1481 AAAAAAGAAGTCTAGAATATAAAAGAAACCAGGGCCACACAGAAGAGGTGAAGTTGATAGTGACCTGTAACATG 1554
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1555 AGGGCTCAGGAAAGTGAACCTGTGGAAGGAGGACTCAGGAAGGTGCCAGATCTTCACAAGGATGACCTGGCCCA 1628
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1629 GCAGAGAATTCAGGGCAGCCTTGCCCCTCACCGCGAGCCCCCGAGCTTCATTACGCTCTCCAACATAACAGAAG 1702
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1703 CTGACTTGGAGACGTGGGAGAGACTCAAAGTGTCAGAAAAGGCGAGGGATGGAGATGTTCAGCACATCTGTGCT 1776
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1777 TCTGAGCCTTCCCCAGAAATTAAAGCAGAAACTGCCATTCGTGATGACTTTGCCAACCGCAAAGCAAGGGCCTC 1850
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1851 TAAGAAAGCTTCCAGCCCCAGGCAAAAGTTTGTGCACTTTGGGCCAGTGACGGAGCTAGATCAGCAGAAATGGA 1924
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1925 AGCGGCTTAGCATTGGCAAGGCTGGGCCTAGAGAGGATGAAGAAGAAGTCATCTGTCATGGCAGCAAGATTCAA 1998
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1999 ATGGACTCTGTGTCTCCTGTCTCAGCGGCCACTTCCAGCTTAAAGGGCCACCAAATATTTAATCGACAAAATGA 2072
Query 481 -------------------------------------------------------------------------- 480
Sbjct 2073 CTGCAGAACAATGAATTGTGGCCGAGGTGACTATTGCAGAAGGGCCTCGTGGCTGGCTCCTGTGCCGGAGTCTC 2146
Query 481 -------------------------------------------------------------------------- 480
Sbjct 2147 AGGAAGAGTGGGTCTGCAGTTTGGGCGAGTGCCCGAGGGGGACAGAGGAAGTTACATCCAAACAGCTGCCACAG 2220
Query 481 -------------------------------------------------------------------------- 480
Sbjct 2221 GATGGCAAAGAAGAAACAGAAAGCGCTCCAAGAGATTCTGAGAGGCTGTCAAAGGCAGAAAGATCAGAGGACAG 2294
Query 481 -------------------------------------------------------------------------- 480
Sbjct 2295 CAGCCAGCCACTGGTGTGTCCTCTGGCCTCTGAGTGTGAGGCTTCAGGGACAGAAGAGAAGTTGGAGAAGATGA 2368
Query 481 -------------------------------------------------------------------------- 480
Sbjct 2369 CAGCTCCTGCCTGGAGTGGCAGTGGACTGAAAGGCCAGCGAAAGTTGGATGATTCACGAAAAGATGACATGATG 2442
Query 481 -------------------------------------------------------------------------- 480
Sbjct 2443 GCCAGGAGAACTGGGATGTCCCTTAGACACACTGGATCCAACCCAAACCAGTTCCTTCCAGTTCCATTTGCAAA 2516
Query 481 -------------------------------------------------------------------------- 480
Sbjct 2517 GCAACAGGATGTGGAAGAATCTTCTAAAGGTCTACCCATGAAAGATCAGAGATACGGTCCGAGAACTCCTGTGT 2590
Query 481 -------------------------------------------------------------------------- 480
Sbjct 2591 CTGATGACGCAGAGAGCACCAGCATGTTTGACATGCGGTGTGAGGAGGAGGCCGCGGTGCAGCCGCACAGCAGG 2664
Query 481 -------------------------------------------------------------------------- 480
Sbjct 2665 GCCCGCCAGGAGCAGCTGCAGCTGATAAATAACCAGCTGAGGGAAGAGGACGACAAATGGCAAGATGACCTGGC 2738
Query 481 -------------------------------------------------------------------------- 480
Sbjct 2739 TCGTTGGAAGAGTCGTAGAAGAAGTGTTTCTCAGGACTTAATCAAGAAAGAGGAAGAAAGGAAAAAAATGGAGA 2812
Query 481 -------------------------------------------------------------------------- 480
Sbjct 2813 AGTTACTGGCTGGAGAAGATGGGACAAGTGAACGAAGGAAAAGCATCAAAACCTACAGAGAAATTGTTCAAGAA 2886
Query 481 -------------------------------------------------------------------------- 480
Sbjct 2887 AAAGAGCGGAGAGAGAGAGAGCTGCATGAAGCATATAAGAACGCTCGGTCCCAGGAGGAGGCAGAGGGGATCCT 2960
Query 481 -------------------------------------------------------------------------- 480
Sbjct 2961 TCAACAGTACATTGAGAGGTTCACCATCAGTGAGGCTGTTCTCGAACGCTTGGAGATGCCAAAAATTCTGGAAA 3034
Query 481 -------------------------------------------------------------------------- 480
Sbjct 3035 GAAGCCATTCAACAGAGCCAAATTTATCCTCCTTCCTGAATGACCCCAATCCCATGAAATACCTGCGGCAACAG 3108
Query 481 -------------------------------------------------------------------------- 480
Sbjct 3109 TCACTGCCTCCACCCAAATTCACTGCCACTGTTGAAACCACCATTGCTCGTGCCAGTGTTCTGGATACCAGCAT 3182
Query 481 -------------------------------------------------------------------------- 480
Sbjct 3183 GTCAGCAGGCAGTGGGTCTCCAAGCAAAACTGTCACTCCCAAAGCAGTGCCTATGCTGACACCCAAGCCTTACT 3256
Query 481 -------------------------------------------------------------------------- 480
Sbjct 3257 CCCAGCCCAAAAATTCTCAAGATGTTCTGAAGACCTTTAAGGTAGACGGGAAAGTCAGTGTGAATGGAGAGACG 3330
Query 481 -------------------------------------------------------------------------- 480
Sbjct 3331 GTTCATAGAGAGGAGGAGAAGGAAAGAGAGTGTCCCACGGTGGCACCTGCCCACTCCTTAACCAAATCCCAGAT 3404
Query 481 -------------------------------------------------------------------------- 480
Sbjct 3405 GTTTGAAGGTGTGGCCAGAGTGCACGGGTCTCCACTGGAGCTGAAACAAGACAACGGTAGCATCGAGATCAACA 3478
Query 481 -------------------------------------------------------------------------- 480
Sbjct 3479 TAAAGAAGCCAAACTCTGTTCCCCAAGAGCTCGCAGCAACCACTGAGAAAACGGAACCGAATAGTCAAGAGGAC 3552
Query 481 -------------------------------------------------------------------------- 480
Sbjct 3553 AAGAATGATGGTGGAAAATCAAGAAAAGGGAATATAGAACTTGCCTCATCAGAACCACAGCATTTTACAACAAC 3626
Query 481 -------------------------------------------------------------------------- 480
Sbjct 3627 TGTGACTCGATGCAGCCCGACCGTGGCCTTTGTGGAATTTCCCTCCAGCCCCCAGCTGAAGAATGATGTGTCGG 3700
Query 481 -------------------------------------------------------------------------- 480
Sbjct 3701 AAGAAAAAGACCAGAAGAAACCAGAAAATGAAATGAGTGGAAAGGTGGAGTTGGTGCTGTCACAAAAGGTGGTA 3774
Query 481 -------------------------------------------------------------------------- 480
Sbjct 3775 AAGCCAAAATCTCCAGAACCCGAAGCAACGCTGACATTTCCATTTCTGGACAAAATGCCTGAAGCCAACCAACT 3848
Query 481 -------------------------------------------------------------------------- 480
Sbjct 3849 ACATTTGCCAAATCTCAATTCTCAAGAGTCGCCTGGCACTGCCAGTGTTCCGCTTAGAGTTCAGAACTCTTGGC 3922
Query 481 -------------------------------------------------------------------------- 480
Sbjct 3923 GACGATCCCAGTTTTTCTCCCAGTCAGTGGATTCTCCAAGCAGTGAGAAGTCACCTGTTATGACACCTTTTAAG 3996
Query 481 -------------------------------------------------------------------------- 480
Sbjct 3997 TTCTGGGCATGGGACCCAGAAGAGGAGCGCAGGCGACAGGAAAAATGGCAACAGGAACAGGAACGTTTGCTCCA 4070
Query 481 -------------------------------------------------------------------------- 480
Sbjct 4071 GGAGAGATACCAGAAGGAGCAGGACAAGCTGAAAGAAGAGTGGGAAAAGGCCCAAAAGGAGGTGGAAGAGGAAG 4144
Query 481 -------------------------------------------------------------------------- 480
Sbjct 4145 AACGCAGATACTATGAGGAGGAGCGTAAGATAATTGAAGACACTGTGGTTCCATTTACTGTTTCTTCAAGTTCC 4218
Query 481 -------------------------------------------------------------------------- 480
Sbjct 4219 GCTGACCAGCTGTCTACCTCTTCCTCCATGACTGAAGGCAGTGGGACAATGAATAAGATAGACCTGGGAAACTG 4292
Query 481 -------------------------------------------------------------------------- 480
Sbjct 4293 TCAAGATGAAAAACAAGACAGAAGATGGAAGAAATCATTCCAGGGAGATGACAGTGACTTATTGCTGAAGACTA 4366
Query 481 -------------------------------------------------------------------------- 480
Sbjct 4367 GGGAAAGTGATCGACTGGAGGAGAAGGGCAGCCTAACTGAAGGGGCCTTGGCTCATTCTGGGAACCCTGTATCA 4440
Query 481 -------------------------------------------------------------------------- 480
Sbjct 4441 AAAGGAGTCCATGAAGACCATCAGCTGGATACCGAGGCTGGGGCCCCACACTGTGGAACAAACCCACAGCTTGC 4514
Query 481 -------------------------------------------------------------------------- 480
Sbjct 4515 TCAGGATCCATCCCAGAATCAGCAGACATCAAATCCAACGCACAGTTCAGAAGATGTGAAGCCAAAAACCCTCC 4588
Query 481 -------------------------------------------------------------------------- 480
Sbjct 4589 CGCTGGATAAAAGCATTAACCATCAGATCGAGTCTCCCAGTGAAAGGCGGAAGAAAAGTCCCCGAGAGCACTTC 4662
Query 481 -------------------------------------------------------------------------- 480
Sbjct 4663 CAGGCTGGGCCTTTCTCTCCCTGTTCTCCCACCCCTCCCGGTCAGTCACCAAACAGGTACAAGAGGTCTATAAG 4736
Query 481 -------------------------------------------------------------------------- 480
Sbjct 4737 TGGAAAGAAGCTGTGCTCTTCCTGTGGGCTTCCTTTGGGTAAAGGAGCTGCAATGATCATCGAGACCCTCAATC 4810
Query 481 -------------------------------------------------------------------------- 480
Sbjct 4811 TCTATTTTCACATCCAGTGTTTCAGGTGTGGAATTTGTAAAGGCCAGCTTGGAGATGCAGTGAGTGGGACGGAT 4884
Query 481 -------------------------------------------------------------------------- 480
Sbjct 4885 GTTAGGATTCGAAATGGTCTCCTGAACTGTAATGATTGCTACATGCGATCCAGAAGTGCCGGGCAGCCTACAAC 4958
Query 481 ---- 480
Sbjct 4959 ATTG 4962
