Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11660
- Subject:
- NR_027762.3
- Aligned Length:
- 1847
- Identities:
- 1138
- Gaps:
- 709
Alignment
Query 1 ---------------------------------------ATGAGCAAACGGAAGAGAAAGAGAAGTGTCCAGGA 35
|||||||||||||||||||||||||||||||||||
Sbjct 1 AGTCTGGGAGTCTTTGGAGTAAGAATGGCCTTGGAAGGGATGAGCAAACGGAAGAGAAAGAGAAGTGTCCAGGA 74
Query 36 GGGAGAGAATCCTGACGACGGCGTTCGCGGGAGTCCGCCGGAAGACTACAGGCTTGGACAGGTCGCCAGTAGCT 109
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GGGAGAGAATCCTGACGACGGCGTTCGCGGGAGTCCGCCGGAAGACTACAGGCTTGGACAGGTCGCCAGTAGCT 148
Query 110 TATTTCGCGGCGAACACCATTCCAGAGGTGGCACCGGTCGGCTGGCGTCCCTCTTCAGTTCTCTGGAGCCCCAG 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 TATTTCGCGGCGAACACCATTCCAGAGGTGGCACCGGTCGGCTGGCGTCCCTCTTCAGTTCTCTGGAGCCCCAG 222
Query 184 ATTCAACCCGTGTACGTGCCTGTGCCTAAACAAACCATCAAAAAAACGAAACGGAATGAGGAGGAAGAAAGTAC 257
||||||||||||||||||||||||||||||
Sbjct 223 ATTCAACCCGTGTACGTGCCTGTGCCTAAA-------------------------------------------- 252
Query 258 ATCCCAGATTGAAAGACCACTTTCGCAAGAACCTGCCAAAAAAGTGAAAGCGAAGAAGAAACACACTAACGCAG 331
Sbjct 253 -------------------------------------------------------------------------- 252
Query 332 AAAAAAAGTTGGCAGACAGGGAAAGCGCTCTAGCGAGTGCTGATTTAGAAGAAGAAATTCACCAGAAACAAGGG 405
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 253 -------------------GGAAAGCGCTCTAGCGAGTGCTGATTTAGAAGAAGAAATTCACCAGAAACAAGGG 307
Query 406 CAGAAAAGGAAAAATTCTCAACCTGGTGTTAAAGTAGCAGATAGAAAAATACTTGATGACACAGAAGACACAGT 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 308 CAGAAAAGGAAAAATTCTCAACCTGGTGTTAAAGTAGCAGATAGAAAAATACTTGATGACACAGAAGACACAGT 381
Query 480 TGTCAGTCAAAGAAAGAAAATTCAAATCAACCAAGAAGAAGAGAGATTAAAGAATGAGAGAACTGTGTTTGTTG 553
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 382 TGTCAGTCAAAGAAAGAAAATTCAAATCAACCAAGAAGAAGAGAGATTAAAGAATGAGAGAACTGTGTTTGTTG 455
Query 554 GGAATTTGCCTGTTACATGTAATAAGAAGAAGCTGAAGTCGTTTTTTAAAGAGTATGGACAAATAGAATCTGTA 627
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 456 GGAATTTGCCTGTTACATGTAATAAGAAGAAGCTGAAGTCGTTTTTTAAAGAGTATGGACAAATAGAATCTGTA 529
Query 628 CGATTTCGTTCTCTGATTCCAGCAGAGGGAACGCTATCCAAAAAGTTGGCAGCAATAAAACGTAAAATTCATCC 701
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 530 CGATTTCGTTCTCTGATTCCAGCAGAGGGAACGCTATCCAAAAAGTTGGCAGCAATAAAACGTAAAATTCATCC 603
Query 702 TGATCAGAAAAATATTAATGCCTATGTTGTGTTTAAGGAGGAGAGTGCTGCCACGCAAGCATTGAAAAGAAATG 775
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 604 TGATCAGAAAAATATTAATGCCTATGTTGTGTTTAAGGAGGAGAGTGCTGCCACGCAAGCATTGAAAAGAAATG 677
Query 776 GGGCCCAGATTGCAGATGGATTTCGTATTAGAGTTGATCTCGCATCTGAGACCTCATCTAGAGACAAGAGATCG 849
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 678 GGGCCCAGATTGCAGATGGATTTCGTATTAGAGTTGATCTCGCATCTGAGACCTCATCTAGAGACAAGAGATCG 751
Query 850 GTTTTTGTGGGGAATCTCCCTTATAAAGTTGAAGAATCTGCCATTGAGAAGCACTTTCTGGACTGTGGAAGTAT 923
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 752 GTTTTTGTGGGGAATCTCCCTTATAAAGTTGAAGAATCTGCCATTGAGAAGCACTTTCTGGACTGTGGAAGTAT 825
Query 924 CATGGCCGTGAGGATTGTGAGAGACAAAATGACAGGCATCGGCAAAGGGTTTGGCTATGTGCTCTTTGAGAATA 997
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 826 CATGGCCGTGAGGATTGTGAGAGACAAAATGACAGGCATCGGCAAAGGGTTTGGCTATGTGCTCTTTGAGAATA 899
Query 998 CAGATTCTGTTCATCTTGCTCTGAAATTAAATAATTCTGAACTCATGGGGAGAAAACTCAGAGTCATGCGTTCT 1071
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 900 CAGATTCTGTTCATCTTGCTCTGAAATTAAATAATTCTGAACTCATGGGGAGAAAACTCAGAGTCATGCGTTCT 973
Query 1072 GTTAATAAAGAAAAATTTAAACAACAAAATTCAAATCCACGATTGAAGAATGTCAGTAAACCTAAGCAGGGACT 1145
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 974 GTTAATAAAGAAAAATTTAAACAACAAAATTCAAATCCACGATTGAAGAATGTCAGTAAACCTAAGCAGGGACT 1047
Query 1146 TAATTTTACTTCCAAAACTGCAGAAGGACATCCTAAAAGCTTATTTATTGGAGAAAAAGCTGTTCTCCTTAAAA 1219
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1048 TAATTTTACTTCCAAAACTGCAGAAGGACATCCTAAAAGCTTATTTATTGGAGAAAAAGCTGTTCTCCTTAAAA 1121
Query 1220 CGAAGAAGAAAGGACAGAAGAAAAGTGGACGCCCTAAGAAACAGAGAAAACAGAAA------------------ 1275
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1122 CGAAGAAGAAAGGACAGAAGAAAAGTGGACGCCCTAAGAAACAGAGAAAACAGAAATAACAACCAGGAACTGCT 1195
Query 1276 -------------------------------------------------------------------------- 1275
Sbjct 1196 TTTTCTTTTCCTGCTGAGTACTGCTAATAAAAGTGCTATTATCTGCTGATAGCATCGTCTGCTATTCATGTGTT 1269
Query 1276 -------------------------------------------------------------------------- 1275
Sbjct 1270 GAGTTTTATACTTCTTTATGGATGGTGTATGTGAAATGTGGAGACTTCCACATTCTCAGTTTATTCACATTGTG 1343
Query 1276 -------------------------------------------------------------------------- 1275
Sbjct 1344 ATACTACCTTTGAAGGTTTTTTTGTTTTTGTTTTGTTTTTTGAGATGGAGTTTGGCTGTTGTCTCCCAGGCTGG 1417
Query 1276 -------------------------------------------------------------------------- 1275
Sbjct 1418 AGTGCAGTGGCGTGATCTTGGCTCACTGCAACCTCTGCCTTCTGGGTTCAAGCGCTTCTCCTGCCTCAGCCTCC 1491
Query 1276 -------------------------------------------------------------------------- 1275
Sbjct 1492 CAAGTAGCTGGGATTACAGGCGCCTGCCACCACGCCTGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTC 1565
Query 1276 -------------------------------------------------------------------------- 1275
Sbjct 1566 ACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCCACCTGCCTTGGCCTCTCAAAGTGCTGGG 1639
Query 1276 ----------------------------------------------------------------------- 1275
Sbjct 1640 ATTACAGGCGTGAGTCACTGCACCCAAGCCTCCTTTCTCTTTTGCCTATTAAACCTCTGCTCTTAACCTTA 1710
