Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11660
- Subject:
- NR_144490.2
- Aligned Length:
- 2092
- Identities:
- 1275
- Gaps:
- 817
Alignment
Query 1 ---------------------------------------ATGAGCAAACGGAAGAGAAAGAGAAGTGTCCAGGA 35
|||||||||||||||||||||||||||||||||||
Sbjct 1 AGTCTGGGAGTCTTTGGAGTAAGAATGGCCTTGGAAGGGATGAGCAAACGGAAGAGAAAGAGAAGTGTCCAGGA 74
Query 36 GGGAGAGAATCCTGACGACGGCGTTCGCGGGAGTCCGCCGGAAGACTACAGGCTTGGACAGGTCGCCAGTAGCT 109
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GGGAGAGAATCCTGACGACGGCGTTCGCGGGAGTCCGCCGGAAGACTACAGGCTTGGACAGGTCGCCAGTAGCT 148
Query 110 TATTTCGCGGCGAACACCATTCCAGAGGTGGCACCGGTCGGCTGGCGTCCCTCTTCAGTTCTCTGGAGCCCCAG 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 TATTTCGCGGCGAACACCATTCCAGAGGTGGCACCGGTCGGCTGGCGTCCCTCTTCAGTTCTCTGGAGCCCCAG 222
Query 184 ATTCAACCCGTGTACGTGCCTGTGCCTAAA-------------------------------------------- 213
||||||||||||||||||||||||||||||
Sbjct 223 ATTCAACCCGTGTACGTGCCTGTGCCTAAAGTAAGTCACTGGGCTTTCTTCCCGAATAGCTCGTTAGAACCACT 296
Query 214 -------------------------------------------------------------------------- 213
Sbjct 297 TACATACAAAGCAATCTTCTTACCTACCGCGTGAAGCGTGATTTCTAAAGGGGGCAGACAGGATTCATTTTAAG 370
Query 214 -------------------------------------------------------------------------- 213
Sbjct 371 TAACCTTTCATGACTCTTACATACCAGTGAGAGAGAAGAGATTCTCATTTAGAAAGACTGAATTATGGCTTAGG 444
Query 214 -----------------------------------------------------CAAACCATCAAAAAAACGAAA 234
|||||||||||||||||||||
Sbjct 445 GTCAGAATTCTAGAAGTATGGGGTCTCAAATATAACTTCAAACTTTTAAAAAGCAAACCATCAAAAAAACGAAA 518
Query 235 CGGAATGAGGAGGAAGAAAGTACATCCCAGATTGAAAGACCACTTTCGCAAGAACCTGCCAAAAAAGTGAAAGC 308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CGGAATGAGGAGGAAGAAAGTACATCCCAGATTGAAAGACCACTTTCGCAAGAACCTGCCAAAAAAGTGAAAGC 592
Query 309 GAAGAAGAAACACACTAACGCAGAAAAAAAGTTGGCAGACAGGGAAAGCGCTCTAGCGAGTGCTGATTTAGAAG 382
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GAAGAAGAAACACACTAACGCAGAAAAAAAGTTGGCAGACAGGGAAAGCGCTCTAGCGAGTGCTGATTTAGAAG 666
Query 383 AAGAAATTCACCAGAAACAAGGGCAGAAAAGGAAAAATTCTCAACCTGGTGTTAAAGTAGCAGATAGAAAAATA 456
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 AAGAAATTCACCAGAAACAAGGGCAGAAAAGGAAAAATTCTCAACCTGGTGTTAAAGTAGCAGATAGAAAAATA 740
Query 457 CTTGATGACACAGAAGACACAGTTGTCAGTCAAAGAAAGAAAATTCAAATCAACCAAGAAGAAGAGAGATTAAA 530
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CTTGATGACACAGAAGACACAGTTGTCAGTCAAAGAAAGAAAATTCAAATCAACCAAGAAGAAGAGAGATTAAA 814
Query 531 GAATGAGAGAACTGTGTTTGTTGGGAATTTGCCTGTTACATGTAATAAGAAGAAGCTGAAGTCGTTTTTTAAAG 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 GAATGAGAGAACTGTGTTTGTTGGGAATTTGCCTGTTACATGTAATAAGAAGAAGCTGAAGTCGTTTTTTAAAG 888
Query 605 AGTATGGACAAATAGAATCTGTACGATTTCGTTCTCTGATTCCAGCAGAGGGAACGCTATCCAAAAAGTTGGCA 678
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 AGTATGGACAAATAGAATCTGTACGATTTCGTTCTCTGATTCCAGCAGAGGGAACGCTATCCAAAAAGTTGGCA 962
Query 679 GCAATAAAACGTAAAATTCATCCTGATCAGAAAAATATTAATGCCTATGTTGTGTTTAAGGAGGAGAGTGCTGC 752
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GCAATAAAACGTAAAATTCATCCTGATCAGAAAAATATTAATGCCTATGTTGTGTTTAAGGAGGAGAGTGCTGC 1036
Query 753 CACGCAAGCATTGAAAAGAAATGGGGCCCAGATTGCAGATGGATTTCGTATTAGAGTTGATCTCGCATCTGAGA 826
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 CACGCAAGCATTGAAAAGAAATGGGGCCCAGATTGCAGATGGATTTCGTATTAGAGTTGATCTCGCATCTGAGA 1110
Query 827 CCTCATCTAGAGACAAGAGATCGGTTTTTGTGGGGAATCTCCCTTATAAAGTTGAAGAATCTGCCATTGAGAAG 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 CCTCATCTAGAGACAAGAGATCGGTTTTTGTGGGGAATCTCCCTTATAAAGTTGAAGAATCTGCCATTGAGAAG 1184
Query 901 CACTTTCTGGACTGTGGAAGTATCATGGCCGTGAGGATTGTGAGAGACAAAATGACAGGCATCGGCAAAGGGTT 974
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 CACTTTCTGGACTGTGGAAGTATCATGGCCGTGAGGATTGTGAGAGACAAAATGACAGGCATCGGCAAAGGGTT 1258
Query 975 TGGCTATGTGCTCTTTGAGAATACAGATTCTGTTCATCTTGCTCTGAAATTAAATAATTCTGAACTCATGGGGA 1048
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 TGGCTATGTGCTCTTTGAGAATACAGATTCTGTTCATCTTGCTCTGAAATTAAATAATTCTGAACTCATGGGGA 1332
Query 1049 GAAAACTCAGAGTCATGCGTTCTGTTAATAAAGAAAAATTTAAACAACAAAATTCAAATCCACGATTGAAGAAT 1122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 GAAAACTCAGAGTCATGCGTTCTGTTAATAAAGAAAAATTTAAACAACAAAATTCAAATCCACGATTGAAGAAT 1406
Query 1123 GTCAGTAAACCTAAGCAGGGACTTAATTTTACTTCCAAAACTGCAGAAGGACATCCTAAAAGCTTATTTATTGG 1196
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 GTCAGTAAACCTAAGCAGGGACTTAATTTTACTTCCAAAACTGCAGAAGGACATCCTAAAAGCTTATTTATTGG 1480
Query 1197 AGAAAAAGCTGTTCTCCTTAAAACGAAGAAGAAAGGACAGAAGAAAAGTGGACGCCCTAAGAAACAGAGAAAAC 1270
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 AGAAAAAGCTGTTCTCCTTAAAACGAAGAAGAAAGGACAGAAGAAAAGTGGACGCCCTAAGAAACAGAGAAAAC 1554
Query 1271 AGAAA--------------------------------------------------------------------- 1275
|||||
Sbjct 1555 AGAAATAACAACCAGGAACTGCTTTTTCTTTTCCTGCTGAGTACTGCTAATAAAAGTGCTATTATCTGCTGATA 1628
Query 1276 -------------------------------------------------------------------------- 1275
Sbjct 1629 GCATCGTCTGCTATTCATGTGTTGAGTTTTATACTTCTTTATGGATGGTGTATGTGAAATGTGGAGACTTCCAC 1702
Query 1276 -------------------------------------------------------------------------- 1275
Sbjct 1703 ATTCTCAGTTTATTCACATTGTGATACTACCTTTGAAGGTTTTTTTGTTTTTGTTTTGTTTTTTGAGATGGAGT 1776
Query 1276 -------------------------------------------------------------------------- 1275
Sbjct 1777 TTGGCTGTTGTCTCCCAGGCTGGAGTGCAGTGGCGTGATCTTGGCTCACTGCAACCTCTGCCTTCTGGGTTCAA 1850
Query 1276 -------------------------------------------------------------------------- 1275
Sbjct 1851 GCGCTTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGCGCCTGCCACCACGCCTGGCTAATTTTTTGT 1924
Query 1276 -------------------------------------------------------------------------- 1275
Sbjct 1925 ATTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCCACCTG 1998
Query 1276 -------------------------------------------------------------------------- 1275
Sbjct 1999 CCTTGGCCTCTCAAAGTGCTGGGATTACAGGCGTGAGTCACTGCACCCAAGCCTCCTTTCTCTTTTGCCTATTA 2072
Query 1276 -------------------- 1275
Sbjct 2073 AACCTCTGCTCTTAACCTTA 2092
