Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11660
- Subject:
- NR_144491.2
- Aligned Length:
- 1847
- Identities:
- 1135
- Gaps:
- 712
Alignment
Query 1 ---------------------------------------ATGAGCAAACGGAAGAGAAAGAGAAGTGTCCAGGA 35
|||||||||||||||||||||||||||||||||||
Sbjct 1 AGTCTGGGAGTCTTTGGAGTAAGAATGGCCTTGGAAGGGATGAGCAAACGGAAGAGAAAGAGAAGTGTCCAGGA 74
Query 36 GGGAGAGAATCCTGACGACGGCGTTCGCGGGAGTCCGCCGGAAGACTACAGGCTTGGACAGGTCGCCAGTAGCT 109
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GGGAGAGAATCCTGACGACGGCGTTCGCGGGAGTCCGCCGGAAGACTACAGGCTTGGACAGGTCGCCAGTAGCT 148
Query 110 TATTTCGCGGCGAACACCATTCCAGAGGTGGCACCGGTCGGCTGGCGTCCCTCTTCAGTTCTCTGGAGCCCCAG 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 TATTTCGCGGCGAACACCATTCCAGAGGTGGCACCGGTCGGCTGGCGTCCCTCTTCAGTTCTCTGGAGCCCCAG 222
Query 184 ATTCAACCCGTGTACGTGCCTGTGCCTAAACAAACCATCAAAAAAACGAAACGGAATGAGGAGGAAGAAAGTAC 257
||||||||||||||||||||||||||||||
Sbjct 223 ATTCAACCCGTGTACGTGCCTGTGCCTAAA-------------------------------------------- 252
Query 258 ATCCCAGATTGAAAGACCACTTTCGCAAGAACCTGCCAAAAAAGTGAAAGCGAAGAAGAAACACACTAACGCAG 331
Sbjct 253 -------------------------------------------------------------------------- 252
Query 332 AAAAAAAGTTGGCAGACAGGGAAAGCGCTCTAGCGAGTGCTGATTTAGAAGAAGAAATTCACCAGAAACAAGGG 405
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 253 -------------------GGAAAGCGCTCTAGCGAGTGCTGATTTAGAAGAAGAAATTCACCAGAAACAAGGG 307
Query 406 CAGAAAAGGAAAAATTCTCAACCTGGTGTTAAAGTAGCAGATAGAAAAATACTTGATGACACAGAAGACACAGT 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 308 CAGAAAAGGAAAAATTCTCAACCTGGTGTTAAAGTAGCAGATAGAAAAATACTTGATGACACAGAAGACACAGT 381
Query 480 TGTCAGTCAAAGAAAGAAAATTCAAATCAACCAAGAAGAAGAGAGATTAAAGAATGAGAGAACTGTGTTTGTTG 553
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 382 TGTCAGTCAAAGAAAGAAAATTCAAATCAACCAAGAAGAAGAGAGATTAAAGAATGAGAGAACTGTGTTTGTTG 455
Query 554 GGAATTTGCCTGTTACATGTAATAAGAAGAAGCTGAAGTCGTTTTTTAAAGAGTATGGACAAATAGAATCTGTA 627
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 456 GGAATTTGCCTGTTACATGTAATAAGAAGAAGCTGAAGTCGTTTTTTAAAGAGTATGGACAAATAGAATCTGTA 529
Query 628 CGATTTCGTTCTCTGATTCCAGCAGAGGGAACGCTATCCAAAAAGTTGGCAGCAATAAAACGTAAAATTCATCC 701
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 530 CGATTTCGTTCTCTGATTCCAGCAGAGGGAACGCTATCCAAAAAGTTGGCAGCAATAAAACGTAAAATTCATCC 603
Query 702 TGATCAGAAAAATATTAATGCCTATGTTGTGTTTAAGGAGGAGAGTGCTGCCACGCAAGCATTGAAAAGAAATG 775
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 604 TGATCAGAAAAATATTAATGCCTATGTTGTGTTTAAGGAGGAGAGTGCTGCCACGCAAGCATTGAAAAGAAATG 677
Query 776 GGGCCCAGATTGCAGATGGATTTCGTATTAGAGTTGATCTCGCATCTGAGACCTCATCTAGAGACAAGAGATCG 849
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 678 GGGCCCAGATTGCAGATGGATTTCGTATTAGAGTTGATCTCGCATCTGAGACCTCATCTAGAGACAAGAGATCG 751
Query 850 GTTTTTGTGGGGAATCTCCCTTATAAAGTTGAAGAATCTGCCATTGAGAAGCACTTTCTGGACTGTGGAAGTAT 923
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 752 GTTTTTGTGGGGAATCTCCCTTATA---TTGAAGAATCTGCCATTGAGAAGCACTTTCTGGACTGTGGAAGTAT 822
Query 924 CATGGCCGTGAGGATTGTGAGAGACAAAATGACAGGCATCGGCAAAGGGTTTGGCTATGTGCTCTTTGAGAATA 997
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 823 CATGGCCGTGAGGATTGTGAGAGACAAAATGACAGGCATCGGCAAAGGGTTTGGCTATGTGCTCTTTGAGAATA 896
Query 998 CAGATTCTGTTCATCTTGCTCTGAAATTAAATAATTCTGAACTCATGGGGAGAAAACTCAGAGTCATGCGTTCT 1071
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 897 CAGATTCTGTTCATCTTGCTCTGAAATTAAATAATTCTGAACTCATGGGGAGAAAACTCAGAGTCATGCGTTCT 970
Query 1072 GTTAATAAAGAAAAATTTAAACAACAAAATTCAAATCCACGATTGAAGAATGTCAGTAAACCTAAGCAGGGACT 1145
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 971 GTTAATAAAGAAAAATTTAAACAACAAAATTCAAATCCACGATTGAAGAATGTCAGTAAACCTAAGCAGGGACT 1044
Query 1146 TAATTTTACTTCCAAAACTGCAGAAGGACATCCTAAAAGCTTATTTATTGGAGAAAAAGCTGTTCTCCTTAAAA 1219
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1045 TAATTTTACTTCCAAAACTGCAGAAGGACATCCTAAAAGCTTATTTATTGGAGAAAAAGCTGTTCTCCTTAAAA 1118
Query 1220 CGAAGAAGAAAGGACAGAAGAAAAGTGGACGCCCTAAGAAACAGAGAAAACAGAAA------------------ 1275
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1119 CGAAGAAGAAAGGACAGAAGAAAAGTGGACGCCCTAAGAAACAGAGAAAACAGAAATAACAACCAGGAACTGCT 1192
Query 1276 -------------------------------------------------------------------------- 1275
Sbjct 1193 TTTTCTTTTCCTGCTGAGTACTGCTAATAAAAGTGCTATTATCTGCTGATAGCATCGTCTGCTATTCATGTGTT 1266
Query 1276 -------------------------------------------------------------------------- 1275
Sbjct 1267 GAGTTTTATACTTCTTTATGGATGGTGTATGTGAAATGTGGAGACTTCCACATTCTCAGTTTATTCACATTGTG 1340
Query 1276 -------------------------------------------------------------------------- 1275
Sbjct 1341 ATACTACCTTTGAAGGTTTTTTTGTTTTTGTTTTGTTTTTTGAGATGGAGTTTGGCTGTTGTCTCCCAGGCTGG 1414
Query 1276 -------------------------------------------------------------------------- 1275
Sbjct 1415 AGTGCAGTGGCGTGATCTTGGCTCACTGCAACCTCTGCCTTCTGGGTTCAAGCGCTTCTCCTGCCTCAGCCTCC 1488
Query 1276 -------------------------------------------------------------------------- 1275
Sbjct 1489 CAAGTAGCTGGGATTACAGGCGCCTGCCACCACGCCTGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTC 1562
Query 1276 -------------------------------------------------------------------------- 1275
Sbjct 1563 ACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCCACCTGCCTTGGCCTCTCAAAGTGCTGGG 1636
Query 1276 ----------------------------------------------------------------------- 1275
Sbjct 1637 ATTACAGGCGTGAGTCACTGCACCCAAGCCTCCTTTCTCTTTTGCCTATTAAACCTCTGCTCTTAACCTTA 1707
