Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11673
- Subject:
- XM_006515992.3
- Aligned Length:
- 4020
- Identities:
- 716
- Gaps:
- 3225
Alignment
Query 1 ATGCCAATCGTGATGGCCCGGGACCTGGAGGAAACAGCATCATCCTCAGAGGATGAGGA---GGTCATAAGTCA 71
||||||.|.|||||||||||||||||||||||.||||||||.|||||||||||.||||| ||.| |..||
Sbjct 1 ATGCCAGTTGTGATGGCCCGGGACCTGGAGGAGACAGCATCGTCCTCAGAGGACGAGGACCTGGCC---AACCA 71
Query 72 AGAGGATCATCCATGCATCATGTGGACTGGAGGCTGCAGGAGAATTCCAGTTTTGGTATTCCATGCCGACGCTA 145
|||||||||.|||||.||.||||||||||||||||||||||||||||||||||||||.||||||||.||.||||
Sbjct 72 AGAGGATCACCCATGTATTATGTGGACTGGAGGCTGCAGGAGAATTCCAGTTTTGGTTTTCCATGCTGAGGCTA 145
Query 146 TTCTTACAAAGGACAACAATATTAGAGTAATTGGAGAACGTTATCATTTGTCTTATAAGATTGTACGAACGGAC 219
||.|.||||||||||||||||||.|||||||||||||.||||||||||||||||||||||||||..||||||||
Sbjct 146 TTTTGACAAAGGACAACAATATTCGAGTAATTGGAGAGCGTTATCATTTGTCTTATAAGATTGTGAGAACGGAC 219
Query 220 AGTCGCCTAGTACGCAGCATTCTGACAGCCCATGGATTTCATGAAGTTCACCCAAGCAGCACTGACTATAACCT 293
||||||||.||.||.||||||||||||||||||||||||||||||||||||||.|||||||||||||||||..|
Sbjct 220 AGTCGCCTGGTGCGAAGCATTCTGACAGCCCATGGATTTCATGAAGTTCACCCGAGCAGCACTGACTATAATTT 293
Query 294 AATGTGGACAGGATCCCACCTGAAGCCCTTCTTACTGCGCACCCTCTCTGAAGCACAAAAAGTTAATCACTTTC 367
.||||||||||||||||||||.||.||.||||||||.||.||||||||||||||||||||.||||||||.||.|
Sbjct 294 GATGTGGACAGGATCCCACCTAAAACCGTTCTTACTTCGAACCCTCTCTGAAGCACAAAAGGTTAATCATTTCC 367
Query 368 CCAGGTCTTATGAACTTACCCGGAAGGACCGACTGTACAAAAACATTATTCGAATGCAGCATACACATGGATTC 441
||||||||||||||||.|||||.|||||||||||||||||||||||.|||||.||||||||.||.|||||||||
Sbjct 368 CCAGGTCTTATGAACTAACCCGCAAGGACCGACTGTACAAAAACATCATTCGGATGCAGCACACTCATGGATTC 441
Query 442 AAGGCTTTTCACATCCTCCCCCAGACCTTCCTCCTGCCAGCTGAGTACGCGGAATTTTGTAATTCATATTCGAA 515
||.||.||.|||||||||||.||||||||.|||||||||||||||||.||.|||||.||||||||||||||.||
Sbjct 442 AAAGCATTCCACATCCTCCCTCAGACCTTTCTCCTGCCAGCTGAGTATGCAGAATTCTGTAATTCATATTCAAA 515
Query 516 GGACCGGGGACCTTGGATAGTAAAACCAGTGGCATCTTCAAGGGGGCGGGGCGTCTACCTGATCAACAATCCAA 589
||||||.||||||||||||||||||||||||||.|||||.||||||||||||||||||.||||||||||.||||
Sbjct 516 GGACCGAGGACCTTGGATAGTAAAACCAGTGGCCTCTTCTAGGGGGCGGGGCGTCTACTTGATCAACAACCCAA 589
Query 590 ACCAGATCTCCCTGGAAGACAACATTTTGGTCTCCCGTTACATTAACAACCCCCTGCTCATAGATGATTTCAAG 663
|||||||||||||||||||.|||||.||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 590 ACCAGATCTCCCTGGAAGAGAACATCTTGGTCTCCCGTTACATTAACAACCCCCTGCTCATAGATGATTTCAAG 663
Query 664 TTTGACATGCGCCTCTATGTGCTCGTGACTTCCTATGATCCTCTTGTCATCTATCTCTATGAAGAAGGATTGGC 737
||||||.||||||||||||||||||||||||||||||||||.||||||||||||||||||||.||||||.||||
Sbjct 664 TTTGACGTGCGCCTCTATGTGCTCGTGACTTCCTATGATCCCCTTGTCATCTATCTCTATGAGGAAGGACTGGC 737
Query 738 TAGAAAATGCAATTGGAAGATGGGAAAT-ACCATGGATAAAAGAA----GGCTACCTATTTATG---------- 796
||| ...|||||.|| ||.|..|| |.||.||.|..||||| .||.|||..||.|||
Sbjct 738 TAG-GTTTGCAACTG-----TGCGTTATGATCAAGGCTCCAAGAACATCCGCAACCAGTTCATGCACCTGACGA 805
Query 797 --TACAGGTGCTT------------------------------------------------------------- 807
|||| ||.|
Sbjct 806 ACTACA---GCGTGAACAAGAAGAGTGGAGACTATGTGAGTTGTGATGACCCAGAAGTGGAGGATTATGGGAAC 876
Query 808 -------------------------------------------------------------------------- 807
Sbjct 877 AAGTGGAGCATGAGTGCCATGCTTAGGTACCTGAAACAAGAAGGCAAGGACACAACTGCATTGATGGCCCATGT 950
Query 808 -------------------------------------------------------------------------- 807
Sbjct 951 GGAAGACCTGATCATTAAGACAATAATCTCTGCTGAACTAGCTATCGCCACTGCCTGTAAAACCTTTGTTCCAC 1024
Query 808 -------------------------------------------------------------------------- 807
Sbjct 1025 ACCGCAGCAGTTGTTTTGAACTGTATGGCTTTGATGTGCTCATAGATAATACTCTGAAGCCATGGTTGTTGGAA 1098
Query 808 -------------------------------------------------------------------------- 807
Sbjct 1099 GTGAATCTCTCTCCTTCTTTGGCCTGTGATGCTCCTCTGGATCTAAAGATTAAAGCCAGTATGATCTCAGACAT 1172
Query 808 -------------------------------------------------------------------------- 807
Sbjct 1173 GTTCACTGTTGTAGGATTTGTGTGCCAAGATCCTGCCCAGCGGACATCCAACCGGTCAATTTATCCCAGTTTTG 1246
Query 808 -------------------------------------------------------------------------- 807
Sbjct 1247 AGTCTTCCAGGCGGAACCCTTTTCAGAAACCTCAGCGCACCCGTCCACTCTCTGCCAGTGATGCAGAAATGAAA 1320
Query 808 -------------------------------------------------------------------------- 807
Sbjct 1321 AACCTTGTGGCCTCAGCCCGGGAGAAGGTACCGGGGAAGTTAGGCGGTTCTGTGCTTGGTCTGTCAATGGAGGA 1394
Query 808 -------------------------------------------------------------------------- 807
Sbjct 1395 GATCAAAGTTCTCCGGAGGGTAAAGGAGGAGAATGATCGGAGAGGAGGGTTTATTCGCATATTTCCTACATCGG 1468
Query 808 -------------------------------------------------------------------------- 807
Sbjct 1469 AGACATGGGAAATATATGGGTCCTACCTTGAACACAAAACCTCCATGAACTACATGCTGGCAACACGCCTATTC 1542
Query 808 -------------------------------------------------------------------------- 807
Sbjct 1543 CAGGACAGAGGAAACCCCAGAAGGAGCTTGCTGACAGGAAGAGCACGAGTGAGCACGGAAGGAGCACCAGAGCT 1616
Query 808 -------------------------------------------------------------------------- 807
Sbjct 1617 AAAGGTGGAGAGCATGAACTCCAAGGCCAAGCTGCATGCCGCTCTCTATGAGAGGAAGCTACTGTCTCTGGAGG 1690
Query 808 -------------------------------------------------------------------------- 807
Sbjct 1691 TGCGAAAACGTAGACGACGGAGTGGCAGATTGAGGGCAATGAGGCCAAAATACCCAGTGATTGCCCAACCAGCT 1764
Query 808 -------------------------------------------------------------------------- 807
Sbjct 1765 GAAATGAATATTAAAACCGAGACAGAGAGTGAAGAGGAGGAAGAAGTTGGATTAGACAATGACGATGAAGAGCA 1838
Query 808 -------------------------------------------------------------------------- 807
Sbjct 1839 GGAAGCATCCCAGGAGGAGTCTGCAGGGTCTCTTGGAGAAAATCAAGCCAAGTACACACCTTCATTGACTGTTA 1912
Query 808 -------------------------------------------------------------------------- 807
Sbjct 1913 TAGTAGAAAATTCGCCCAGAGACAATGCAATGAAAGTTGCCGAGTGGACTAATAAAGGTGAACCGTGCTGCAAA 1986
Query 808 -------------------------------------------------------------------------- 807
Sbjct 1987 ATCGAGGCTCAGGAGCCAGAGTCTAAATTCAACCTGATGCAGATTCTCCAGGACAATGGCAATCTAAGCAAAGT 2060
Query 808 -------------------------------------------------------------------------- 807
Sbjct 2061 ACAGGCCCGGTTAGCATTCTCTGCCTATCTTCAGCATGTGCAAATCCGTCTGACAAAAGACAGTGGTGGTCAGA 2134
Query 808 -------------------------------------------------------------------------- 807
Sbjct 2135 CACTCAGTCCCAGCTGGGCTGCCAAAGAGGATGAACAGATGGAACTGGTGGTTCGTTTTCTCAAGCGAGCGTCA 2208
Query 808 -------------------------------------------------------------------------- 807
Sbjct 2209 AGTAACCTCCAGCACTCGCTGAGGATGGTATTGCCTAGTCGGCGGTTGGCACTTCTGGAGCGCAGGAGAATCCT 2282
Query 808 -------------------------------------------------------------------------- 807
Sbjct 2283 TGCCCACCAGCTAGGAGACTTTATCGGTGTGTACAACAAGGAAACAGAACAAATGGCTGAAAAGAAATCAAAGA 2356
Query 808 -------------------------------------------------------------------------- 807
Sbjct 2357 AGAAACTTGAAGAAGAGGAAGAAGATGGGGTGAACGCAGAAAGCTTTCAGGAGTTTATTCGACAAGCAAGTGAG 2430
Query 808 -------------------------------------------------------------------------- 807
Sbjct 2431 GCTGAACTGGAGGAGGTGTTGACTTTTTATACCCAAAAAAACAAGTCTGCCAGTGTCTTCCTGGGGACTCACTC 2504
Query 808 -------------------------------------------------------------------------- 807
Sbjct 2505 GAAAAGCTCTAAGAACAGCAGTAGTTACTCTGATAGTGGGGCAAAAGGTGATCACCCTGAGACCATACAAGAAG 2578
Query 808 -------------------------------------------------------------------------- 807
Sbjct 2579 TGAAAATAAAGCAACCCAAACAGCAACAGGCAACAGAAATCCACGCCGATAAATTATCTCGATTTACCACTTCA 2652
Query 808 -------------------------------------------------------------------------- 807
Sbjct 2653 TCAGGAAAAGAGGCGAAACTAGTGTATACCAATTGCTCTTCTTTCTGCAGTCCTGCTGCTGTTCTTCTGCAGAG 2726
Query 808 -------------------------------------------------------------------------- 807
Sbjct 2727 ACTCCCCAGCTCCCATCTGTCGTCCGTGATCACAACCTCTGCCCTCTCGGCAGGCCCTGGCCACCATGCTTCTC 2800
Query 808 -------------------------------------------------------------------------- 807
Sbjct 2801 TATCTCAAATCCCTCCAGCTGTCCCCAGCCTGCCTCACCAGCCAGCACTGCTACTGAGCCCCGTTCCTGACAAT 2874
Query 808 -------------------------------------------------------------------------- 807
Sbjct 2875 GCCCCTCCCTCCATACACTCTGGAACCCAGAATGTAAGCCCTGCGGGGCTGCCACGCTGTCGATCCGGCAGCTA 2948
Query 808 -------------------------------------------------------------------------- 807
Sbjct 2949 CACCATTGGCCCCTTTTCCTCTTTCCAAAGTGCCGCACATATCTATAGCCAGAAACTGTCTCGTCCCTCCTCAG 3022
Query 808 -------------------------------------------------------------------------- 807
Sbjct 3023 CAAAGGCAGGGTCATGTCATCCACACAAGCATCATTCAGGAATTGCCAAAACACAAAAAGAGGGTGAAGATGTT 3096
Query 808 -------------------------------------------------------------------------- 807
Sbjct 3097 TCATTAAACAGGAGGTACAACCAAAGTCTGGTTACGGCTGAACTCCAGCGGCTCGCGGAGAAGCAGGCAGCCAG 3170
Query 808 -------------------------------------------------------------------------- 807
Sbjct 3171 GCAGTATTCTCCAGCCAGTCACATCAGTCTCCTCACTCAGCAGGTGACAAACCTGAATTTGGCCAGCAGTGTCA 3244
Query 808 -------------------------------------------------------------------------- 807
Sbjct 3245 TAAACAGAAGCAGTGCATCCACCCCCCCTACCCTTCGGCCTGTCATCAGTCCTAGTGGCCCAACGTGGTCTATA 3318
Query 808 -------------------------------------------------------------------------- 807
Sbjct 3319 CAGCCAGACCTCCACGCTTCTGAGACCCACTCCAGCCCCCCTGGAAGCAGGAGCCTCCAGACAGGTGGCTTTGC 3392
Query 808 -------------------------------------------------------------------------- 807
Sbjct 3393 CTGGGAGGGCGAGGTAGAGAACAACGCATACAGCAAGACTACAGGGGTGGTCCCCCAGCACAAGTACCACCCCA 3466
Query 808 -------------------------------------------------------------------------- 807
Sbjct 3467 CAGCAGGCAGCTACCAGCTCCACTTTGCTCTCCAGCAACTCGAGCAACAAAAACTTCAGTCCCGGCAACTTCTG 3540
Query 808 -------------------------------------------------------------------------- 807
Sbjct 3541 GACCAGAGTCGAGCCCGGCACCAGGCAATCTTTGGCAGCCAGACACTACCTAACTCCAGTTTATGGACAATGAA 3614
Query 808 -------------------------------------------------------------------------- 807
Sbjct 3615 TAATGGTCCAGGCTGCAGAATTTCAAGTGCCACAACTGGTGGCCAGAAGCCAAACACCCTGCCACAAAAAGTAG 3688
Query 808 -------------------------------------------------------------------------- 807
Sbjct 3689 TGGCACCTCCAAATTCATCCACCTTGGTCTCCAAGCCTGCATCCAATCACAAGCAAGTGCTCAGAAAGCCGGCA 3762
Query 808 -------------------------------------------------------------------------- 807
Sbjct 3763 TCCCAGAGGGCTTCCAAGTCTCACCGGGCTCCTTTGTGTTTCAGAGGGTCCTCTGCAGAAGGGCAGCTGAACGG 3836
Query 808 -------------------------------------------------------------------------- 807
Sbjct 3837 TCTCCAGAGCAGCCTTAACCCTGCAGCCTTCATGCCCATCACCAACTCCACAGGATCTTTGGAAGCTCCCCAAG 3910
Query 808 -------------------------------------------------------------------------- 807
Sbjct 3911 TTATTTTCGCAAGATCCAAACCCTTACCCACACAGTCTGGAGCCCTTGCTACAGTTATAGGACAGAGAAAATCA 3984
Query 808 ------------------------ 807
Sbjct 3985 AAGTCGGTGAAGTCAGGGACAATT 4008
