Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11673
- Subject:
- XM_006516008.3
- Aligned Length:
- 2118
- Identities:
- 716
- Gaps:
- 1323
Alignment
Query 1 ATGCCAATCGTGATGGCCCGGGACCTGGAGGAAACAGCATCATCCTCAGAGGATGAGGA---GGTCATAAGTCA 71
||||||.|.|||||||||||||||||||||||.||||||||.|||||||||||.||||| ||.| |..||
Sbjct 1 ATGCCAGTTGTGATGGCCCGGGACCTGGAGGAGACAGCATCGTCCTCAGAGGACGAGGACCTGGCC---AACCA 71
Query 72 AGAGGATCATCCATGCATCATGTGGACTGGAGGCTGCAGGAGAATTCCAGTTTTGGTATTCCATGCCGACGCTA 145
|||||||||.|||||.||.||||||||||||||||||||||||||||||||||||||.||||||||.||.||||
Sbjct 72 AGAGGATCACCCATGTATTATGTGGACTGGAGGCTGCAGGAGAATTCCAGTTTTGGTTTTCCATGCTGAGGCTA 145
Query 146 TTCTTACAAAGGACAACAATATTAGAGTAATTGGAGAACGTTATCATTTGTCTTATAAGATTGTACGAACGGAC 219
||.|.||||||||||||||||||.|||||||||||||.||||||||||||||||||||||||||..||||||||
Sbjct 146 TTTTGACAAAGGACAACAATATTCGAGTAATTGGAGAGCGTTATCATTTGTCTTATAAGATTGTGAGAACGGAC 219
Query 220 AGTCGCCTAGTACGCAGCATTCTGACAGCCCATGGATTTCATGAAGTTCACCCAAGCAGCACTGACTATAACCT 293
||||||||.||.||.||||||||||||||||||||||||||||||||||||||.|||||||||||||||||..|
Sbjct 220 AGTCGCCTGGTGCGAAGCATTCTGACAGCCCATGGATTTCATGAAGTTCACCCGAGCAGCACTGACTATAATTT 293
Query 294 AATGTGGACAGGATCCCACCTGAAGCCCTTCTTACTGCGCACCCTCTCTGAAGCACAAAAAGTTAATCACTTTC 367
.||||||||||||||||||||.||.||.||||||||.||.||||||||||||||||||||.||||||||.||.|
Sbjct 294 GATGTGGACAGGATCCCACCTAAAACCGTTCTTACTTCGAACCCTCTCTGAAGCACAAAAGGTTAATCATTTCC 367
Query 368 CCAGGTCTTATGAACTTACCCGGAAGGACCGACTGTACAAAAACATTATTCGAATGCAGCATACACATGGATTC 441
||||||||||||||||.|||||.|||||||||||||||||||||||.|||||.||||||||.||.|||||||||
Sbjct 368 CCAGGTCTTATGAACTAACCCGCAAGGACCGACTGTACAAAAACATCATTCGGATGCAGCACACTCATGGATTC 441
Query 442 AAGGCTTTTCACATCCTCCCCCAGACCTTCCTCCTGCCAGCTGAGTACGCGGAATTTTGTAATTCATATTCGAA 515
||.||.||.|||||||||||.||||||||.|||||||||||||||||.||.|||||.||||||||||||||.||
Sbjct 442 AAAGCATTCCACATCCTCCCTCAGACCTTTCTCCTGCCAGCTGAGTATGCAGAATTCTGTAATTCATATTCAAA 515
Query 516 GGACCGGGGACCTTGGATAGTAAAACCAGTGGCATCTTCAAGGGGGCGGGGCGTCTACCTGATCAACAATCCAA 589
||||||.||||||||||||||||||||||||||.|||||.||||||||||||||||||.||||||||||.||||
Sbjct 516 GGACCGAGGACCTTGGATAGTAAAACCAGTGGCCTCTTCTAGGGGGCGGGGCGTCTACTTGATCAACAACCCAA 589
Query 590 ACCAGATCTCCCTGGAAGACAACATTTTGGTCTCCCGTTACATTAACAACCCCCTGCTCATAGATGATTTCAAG 663
|||||||||||||||||||.|||||.||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 590 ACCAGATCTCCCTGGAAGAGAACATCTTGGTCTCCCGTTACATTAACAACCCCCTGCTCATAGATGATTTCAAG 663
Query 664 TTTGACATGCGCCTCTATGTGCTCGTGACTTCCTATGATCCTCTTGTCATCTATCTCTATGAAGAAGGATTGGC 737
||||||.||||||||||||||||||||||||||||||||||.||||||||||||||||||||.||||||.||||
Sbjct 664 TTTGACGTGCGCCTCTATGTGCTCGTGACTTCCTATGATCCCCTTGTCATCTATCTCTATGAGGAAGGACTGGC 737
Query 738 TAGAAAATGCAATTGGAAGATGGGAAAT-ACCATGGATAAAAGAA----GGCTACCTATTTATG---------- 796
||| ...|||||.|| ||.|..|| |.||.||.|..||||| .||.|||..||.|||
Sbjct 738 TAG-GTTTGCAACTG-----TGCGTTATGATCAAGGCTCCAAGAACATCCGCAACCAGTTCATGCACCTGACGA 805
Query 797 --TACAGGTGCTT------------------------------------------------------------- 807
|||| ||.|
Sbjct 806 ACTACA---GCGTGAACAAGAAGAGTGGAGACTATGTGAGTTGTGATGACCCAGAAGTGGAGGATTATGGGAAC 876
Query 808 -------------------------------------------------------------------------- 807
Sbjct 877 AAGTGGAGCATGAGTGCCATGCTTAGGTACCTGAAACAAGAAGGCAAGGACACAACTGCATTGATGGCCCATGT 950
Query 808 -------------------------------------------------------------------------- 807
Sbjct 951 GGAAGACCTGATCATTAAGACAATAATCTCTGCTGAACTAGCTATCGCCACTGCCTGTAAAACCTTTGTTCCAC 1024
Query 808 -------------------------------------------------------------------------- 807
Sbjct 1025 ACCGCAGCAGTTGTTTTGAACTGTATGGCTTTGATGTGCTCATAGATAATACTCTGAAGCCATGGTTGTTGGAA 1098
Query 808 -------------------------------------------------------------------------- 807
Sbjct 1099 GTGAATCTCTCTCCTTCTTTGGCCTGTGATGCTCCTCTGGATCTAAAGATTAAAGCCAGTATGATCTCAGACAT 1172
Query 808 -------------------------------------------------------------------------- 807
Sbjct 1173 GTTCACTGTTGTAGGATTTGTGTGCCAAGATCCTGCCCAGCGGACATCCAACCGGTCAATTTATCCCAGTTTTG 1246
Query 808 -------------------------------------------------------------------------- 807
Sbjct 1247 AGTCTTCCAGGCGGAACCCTTTTCAGAAACCTCAGCGCACCCGTCCACTCTCTGCCAGTGATGCAGAAATGAAA 1320
Query 808 -------------------------------------------------------------------------- 807
Sbjct 1321 AACCTTGTGGCCTCAGCCCGGGAGAAGGTACCGGGGAAGTTAGGCGGTTCTGTGCTTGGTCTGTCAATGGAGGA 1394
Query 808 -------------------------------------------------------------------------- 807
Sbjct 1395 GATCAAAGTTCTCCGGAGGGTAAAGGAGGAGAATGATCGGAGAGGAGGGTTTATTCGCATATTTCCTACATCGG 1468
Query 808 -------------------------------------------------------------------------- 807
Sbjct 1469 AGACATGGGAAATATATGGGTCCTACCTTGAACACAAAACCTCCATGAACTACATGCTGGCAACACGCCTATTC 1542
Query 808 -------------------------------------------------------------------------- 807
Sbjct 1543 CAGGACAGAGGAAACCCCAGAAGGAGCTTGCTGACAGGAAGAGCACGAGTGAGCACGGAAGGAGCACCAGAGCT 1616
Query 808 -------------------------------------------------------------------------- 807
Sbjct 1617 AAAGGTGGAGAGCATGAACTCCAAGGCCAAGCTGCATGCCGCTCTCTATGAGAGGAAGCTACTGTCTCTGGAGG 1690
Query 808 -------------------------------------------------------------------------- 807
Sbjct 1691 TGCGAAAACGTAGACGACGGAGTGGCAGATTGAGGGCAATGAGGCCAAAATACCCAGTGATTGCCCAACCAGCT 1764
Query 808 -------------------------------------------------------------------------- 807
Sbjct 1765 GAAATGAATATTAAAACCGAGACAGAGAGTGAAGAGGAGGAAGAAGTTGGATTAGACAATGACGATGAAGAGCA 1838
Query 808 -------------------------------------------------------------------------- 807
Sbjct 1839 GGAAGCATCCCAGGAGGAGTCTGCAGGGTCTCTTGGAGAAAATCAAGCCAAGTACACACCTTCATTGACTGTTA 1912
Query 808 -------------------------------------------------------------------------- 807
Sbjct 1913 TAGTAGAAAATTCGCCCAGAGACAATGCAATGAAAGTTGCCGAGTGGACTAATAAAGGTGAACCGTGCTGCAAA 1986
Query 808 -------------------------------------------------------------------------- 807
Sbjct 1987 ATCGAGGCTCAGGAGCCAGAGTCTAAATTCAACCTGATGCAGATTCTCCAGGACAATGGCAATCTAAGGAACTG 2060
Query 808 ---------------------------------------------- 807
Sbjct 2061 GTGGTTCGTTTTCTCAAGCGAGCGTCAAGTAACCTCCAGCACTCGC 2106
