Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11681
- Subject:
- XM_006501362.1
- Aligned Length:
- 4242
- Identities:
- 853
- Gaps:
- 3327
Alignment
Query 1 ATGGCGGACACCGACCTGTTCATGGAATGTGAGGAGGAGGAGTTGGAGCCATGGCAGAAAATCAGTGATGTCAT 74
||||||||||||||||||||.||||||||||||||||||||..|||||||||||||||||||||||||||||||
Sbjct 1 ATGGCGGACACCGACCTGTTTATGGAATGTGAGGAGGAGGAACTGGAGCCATGGCAGAAAATCAGTGATGTCAT 74
Query 75 TGAGGACTCTGTAGTTGAAGATTATAATTCAGTGGATAAAACTACCACAGTTTCTGTGAGCCAGCAGCCAGTCT 148
||||||||||||||||||||||||.|||||.|||||||||||||| |||
Sbjct 75 TGAGGACTCTGTAGTTGAAGATTACAATTCTGTGGATAAAACTAC------TTC-------------------- 122
Query 149 CGGCTCCAGTGCCCATCGCTGCCCATGCTTCTGTTGCTGGGCACCTCTCTACATCCACCACCGTTAGTAGCAGC 222
Sbjct 123 -------------------------------------------------------------------------- 122
Query 223 GGGGCACAGAACAGCGACAGTACAAAGAAGACTCTTGTCACACTAATTGCCAACAACAATGCTGGCAATCCTTT 296
.|||||.|||.||||
Sbjct 123 -----------------------------------------------------------CGCTGGTAATACTTT 137
Query 297 GGTCCAGCAAGGTGGACAGCCACTCATCCTGACCCAGAATCCAGCCCCAGGTCTGGGCACAATGGTTACTCAAC 370
||||||||||||||||||||||||||||||.|||||.||.|||||.|||||||||||.||||||||||||||||
Sbjct 138 GGTCCAGCAAGGTGGACAGCCACTCATCCTCACCCAAAACCCAGCACCAGGTCTGGGAACAATGGTTACTCAAC 211
Query 371 CAGTATTGAGGCCTGTTCAGGTCATGCAGAATGCCAATCATGTGACTAGTTCCCCTGTGGCCTCACAACCAATA 444
||||||||||.|||||.||||||||||||||||||||||||||||||||.||||||||||||||||||||.||.
Sbjct 212 CAGTATTGAGACCTGTCCAGGTCATGCAGAATGCCAATCATGTGACTAGCTCCCCTGTGGCCTCACAACCTATC 285
Query 445 TTTATCACTACGCAGGGATTTCCTGTAAGGAATGTCCGGCCTGTACAAAATGCAATGAATCAGGTTGGGATTGT 518
||.||||||||.|||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||
Sbjct 286 TTCATCACTACCCAGGGATTTCCTGTAAGGAATGTTCGGCCTGTACAAAATGCAATGAATCAGGTTGGGATTGT 359
Query 519 GCTGAACGTACAGCAAGGCCAAACGGTTAGACCAATTACACTAGTTCCAGCCCCAGGTACCCAGTTTGTTAAGC 592
||||||||||||||||||||||||.|||||||||||||||.|.||.||||||||||||||.|||||||||||||
Sbjct 360 GCTGAACGTACAGCAAGGCCAAACAGTTAGACCAATTACATTGGTCCCAGCCCCAGGTACACAGTTTGTTAAGC 433
Query 593 CGACAGTTGGAGTTCCACAAGTGTTCTCCCAGATGACCCCTGTGAGGCCAGGCTCCACAATGCCTGTGAGGCCC 666
||||||||||.||.||||||||||||||.|||||||||||.|||||||||||||||||||||||||||||||||
Sbjct 434 CGACAGTTGGCGTCCCACAAGTGTTCTCTCAGATGACCCCCGTGAGGCCAGGCTCCACAATGCCTGTGAGGCCC 507
Query 667 ACCACCAACACCTTCACCACCGTCATCCCGGCCACTCTTACCATTCGAAGCACCGTCCCACAGTCCCAGTCCCA 740
||||||||||||||.||||||||||||||.||.|||||.|||||.||||||||.||||||||||||||||||||
Sbjct 508 ACCACCAACACCTTTACCACCGTCATCCCAGCTACTCTCACCATCCGAAGCACTGTCCCACAGTCCCAGTCCCA 581
Query 741 GCAGACCAAGTCCACTCCCAGCACTTCTACCACTCCCACTGCCACACAGCCAACCTCACTGGGGCAACTAGCTG 814
|||||||||||||||.|||||.||.||.||.|||||||||||||||||.|||||||||||||||||.|||||||
Sbjct 582 GCAGACCAAGTCCACCCCCAGTACCTCCACTACTCCCACTGCCACACAACCAACCTCACTGGGGCAGCTAGCTG 655
Query 815 TTCAGTCTCCAGGCCAGTCAAACCAGACCACGAATCCCAAGCTAGCTCCCTCCTTCCCCTCTCCACCTGCAGTG 888
.||||.|||||||||||||.|||||||||.||||||||||.|||||||||||||||||||||||||||||||||
Sbjct 656 GTCAGCCTCCAGGCCAGTCCAACCAGACCTCGAATCCCAAACTAGCTCCCTCCTTCCCCTCTCCACCTGCAGTG 729
Query 889 AGCATTGCCAGCTTTGTCACTGTGAAGCGACCTGGTGTTACAGGCGAAAATAGCAATGAAGTGGCCAAATTGGT 962
|||||||||||||||||||||||||||||||||||.||||||||.|||||||||||.|||||||||||||||||
Sbjct 730 AGCATTGCCAGCTTTGTCACTGTGAAGCGACCTGGGGTTACAGGTGAAAATAGCAACGAAGTGGCCAAATTGGT 803
Query 963 GAATACCCTTAACACCATCCCTTCCCTGGGCCAGAGTCCTGGGCCAGTGGTGGTGTCCAACAACAGCTCTGCTC 1036
||||||.||||||||..||||||||||||||||||||||||||||.||||||||||||||||||||.||||
Sbjct 804 GAATACTCTTAACACTGTCCCTTCCCTGGGCCAGAGTCCTGGGCCCGTGGTGGTGTCCAACAACAGTTCTG--- 874
Query 1037 ATGGCTCTCAAAGAACCAGCGGACCTGAGTCTTCAATGAAAGGTACAATAACC--------------------- 1089
|||||||||||||.||.||.||.||||||.|||||| |.|||
Sbjct 875 ------CTCAAAGAACCAGTGGGCCCGAATCTTCAGTGAAAG------TGACCTCTTCCATCCCAGTGTTTGAC 936
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 937 CTCCAGGACGGTGGACGGAAAATATGTCCACGGTGTAATGCCCAGTTCCGTGTTACTGAAGCTCTGAGAGGTCA 1010
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 1011 CATGTGTTACTGCTGCCCTGAAATGGTTGAGTACCAAAAGAAAGGCAAGTCCCTCGATGCAGAGCCCAGTGTCC 1084
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 1085 CATCGGCAGCAAAGCCCTCGTCCCCTGAGAAGACAGCCCCTGTTACTTCCACACCCTCCTCTACACCAATTCCT 1158
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 1159 GCTCTCTCACCACCTACCAAAGTACCAGAGCCAAATGAGAATGCTGGAGATGCTGTCCAGACCAAGCTTATTAT 1232
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 1233 GCTGGTTGATGATTTCTACTATGGACGGGATGGGGGCAAAGCAGCCCAGCTCACGAGCTTCCCTAAGGTTGCCA 1306
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 1307 CGTCTTTCCGATGCCCTCATTGTACTAAGAGGCTAAAGAACAACATTCGATTCATGAACCACATGAAGCACCAC 1380
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 1381 GTAGAACTTGATCAACAGAATGGTGAGGTGGATGGTCACACCATCTGCCAGCACTGTTACCGCCAGTTCTCCAC 1454
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 1455 CCCTTTCCAGCTCCAGTGCCACTTGGAAAATGTTCATAGTCCCTATGAATCTACTACCAAGTGCAAGATCTGTG 1528
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 1529 AGTGGGCCTTTGAAAGCGAGCCCTTGTTCCTCCAGCATATGAAGGACACCCACAAGCCTGGAGAGATGCCTTAT 1602
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 1603 GTTTGTCAGGTGTGTCAGTATCGCTCCTCCCTCTACTCTGAAGTAGATGTCCATTTTCGGATGATCCATGAAGA 1676
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 1677 TACTCGGCATTTGCTTTGCCCGTATTGCCTAAAAGTCTTCAAAAATGGCAATGCCTTCCAGCAACACTACATGA 1750
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 1751 GGCACCAGAAGAGAAATGTTTATCACTGCAACAAATGCCGGCTGCAGTTTCTCTTTGCCAAGGACAAAATTGAA 1824
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 1825 CACAAGCTGCAGCACCATAAAACCTTCCGTAAGCCTAAGCAACTGGAAGGCTTGAAACCAGGCACCAAGGTGAC 1898
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 1899 AATCCGGGCTTCCCGGGGGCAGCCGAGAACTGTTCCTGTGTCTTCAAATGATGCACCTTCTGGCACCTTGCAGG 1972
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 1973 AGGCAGCAGCGCTGACCTCCACTGACCCCCTACCTGTCTTCCTTTATCCCCCTGTCCAGCGCAATATCCAGAAG 2046
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 2047 AGAGCTGTTAGGAAAATGAGCGTCATGGGCCGGCAGACATGTCTGGAGTGCAGCTTTGAGATTCCAGATTTTCC 2120
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 2121 TAATCATTTCCCTACCTATGTGCATTGTTCTCTCTGCCGATACAGCACCTGCTGCTCTAGAGCTTATGCCAATC 2194
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 2195 ACATGATCAACAATCATGTTCCACGGAAAAGTCCCAAGTATTTGGCTTTGTTTAAAAATTCTGTAAGTGGAATC 2268
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 2269 AAGCTGGCCTGCACTTCGTGTACCTTTGCTACCTCCGTGGGAGATGCGATGGCCAAGCATTTAGTGTTCAACCC 2342
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 2343 CTCCCACAGATCTAGCAACATCTTACCACGGGGGCTCAGTTGGATGTCTCACTTGAGGCCTGGCCAGGCTTCTG 2416
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 2417 AACGAGTGTTCGACTGGAGCATGAAGAATACATATCTTCCACCTCCCCTCGTCCCTAACAAAGCTGCCACTGTG 2490
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 2491 AAGCCTGTAGGAGTCACCCCAGCGGAGCCCCAAGAGCTGGCAGGTCCTGTGCTCCAGGCACTTCCATCCCCAGC 2564
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 2565 CTCAACTGCAACCCCACCAGCAACCCCCACTCACCCACAGCCCTCCGCCCTGCCACCCTCGGCCACAGAGGGGA 2638
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 2639 CTGAGTGTCTGAATGTCAGTGAACAGGAAGAAGGAAGCCCTGTCACCCAGGATCCTGAGCCAGCATCAGGTGGT 2712
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 2713 GGAGGTGGCAGTGGGGTTGGCAAGAAAGAGCAGCTGTCTGTGAAGAAGCTTCGGGTAGTACTGTTTGCCCTGTG 2786
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 2787 CTGCAACACTGAACAGGCGGCTGAACACTTTCGAAACCCCCAGCGGCGAATCCGTCGTTGGCTTCGACGCTTCC 2860
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 2861 AGGCCTCTCAGGGAGAGAACTTAGAGGGCAAATATCTCAGCTTTGAGGCAGAAGAAAAACTGGCTGAATGGGTG 2934
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 2935 CTGATCCAGAGAGAGCAGCAGCTCCCTGTAAATGAGGAGACCTTGTTTCAGAAGGCCACCAAAATTGGACGCTC 3008
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 3009 TTTGGAAGGGGGGTTTAAGATCTCCTATGAGTGGGCTGTGCGCTTCATGCTTCGGCACCACCTCACTCCCCATG 3082
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 3083 CCCGGCGAGCTGTCGCCCACACGTTACCGAAGCATGTAGCAGAAAATGCTGGACTCTTCATTGAGTTTGTGCAG 3156
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 3157 CGGCAGATTCACAATCAGGACTTACCTTTGTCTATGATTGTGGCTATTGATGAGATCTCTTTGTTCCTGGACAC 3230
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 3231 AGAGGTGCTGAGCAGTGATGACCGAAAGGAGAACGCTCTGCAGACAGTGGGCACAGGGGAGCCTTGGTGTGACG 3304
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 3305 TCGTGCTGGCTATCCTAGCAGATGGCACTGTCCTCCCCACCCTTGTTTTCTTCCGAGGACAAGCGAATCGGTTC 3378
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 3379 GCTAATGTGCCAGACTCTATATTACTAGAGGCCAAAGACAGTGGCTACAGCGACGACGAAATCATGGAGCTTTG 3452
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 3453 GTCAACCCGTGTATGGAAGAAGCACACAGCTTGTCAGCACAGCAAAAGCATGTTGGTGATGGACTGTCATCGCA 3526
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 3527 CTCACTTGTCAGAAGAAGTACTGGCCCTGCTCAGTGCCTCTAGCACTTTGCCTGCGGTAGTCCCCGCCGGTTGT 3600
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 3601 AGCTCCAAAATCCAGCCACTAGATGTATGCATCAAACGAACTGTTAAGAACTTCCTGCACAAAAAGTGGAAGGA 3674
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 3675 ACAGGCTCGGGAAATGGCTGACGCTGCTTGTGATTCTGATGTCTTGCTTCAGCTGGTGTTGGTCTGGCTGGGAG 3748
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 3749 AGGTGCTGGGTGTCATTGGGGACTCCCCAGAGCTAGTTCAGCGGTCCTTCCTTGTGGCTAGTGTTCTGCCAGGT 3822
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 3823 CCCGATGGCAACGTTAACTCACCCACACGCAACGCTGACATGCAGGAGGAGCTCATTGCCTCCCTAGAGGAGCA 3896
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 3897 GCTCAAGCTAAATGGAGAACAGTCTGAGGAGCACTCAGCTTCTGCCCCCCGACCCAGGTCATCTCCTGAAGAGA 3970
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 3971 CAGTCGAGCCTGAAAGCCTTCACCAGCTTTTTGAGGGGGAAAGTGAGACGGAGTCTTTCTATGGCTTTGAGGAA 4044
Query 1090 ------------------------ 1089
Sbjct 4045 GCTGACCTTGATCTGATGGAGATC 4068
