Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11686
- Subject:
- NM_015117.3
- Aligned Length:
- 2858
- Identities:
- 981
- Gaps:
- 1867
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGAGGAAAAGGAGATATTACGGCGGCAGATCCGCCTACTGCAGGGTCTGATTGATGACTACAAAACCCTCCA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CGGCAATGCCCCGGCCCCTGGTACCCCAGCAGCTTCTGGGTGGCAGCCACCCACTTACCACAGTGGCAGAGCCT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TTAGTGCCCGCTACCCTCGTCCAAGCCGGAGGGGCTACTCTTCCCACCATGGGCCTTCGTGGCGCAAGAAATAC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TCCCTCGTGAATCGGCCCCCGGGACCCTCAGACCCTCCTGCCGACCATGCTGTGCGGCCGTTGCACGGGGCCCG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGGGGGCCAGCCTCCTGTCCCGCAGCAGCATGTCCTTGAGAGACAGGTCCAGCTCAGTCAGGGTCAGAACGTGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TCATCAAAGTTAAACCGCCATCAAAGTCTGGCTCTGCCAGTGCCTCAGGGGCCCAGCGGGGCTCTTTGGAAGAA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TTTGAGGAAACCCCCTGGAGTGACCAAAGGCCCCGGGAAGGTGAAGGTGAGCCCCCTCGGGGACAGCTGCAGCC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CTCGAGGCCAACAAGAGCCAGGGGGACCTGCAGTGTGGAAGATCCTCTTCTGGTCTGCCAGAAGGAGCCTGGTA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AGCCCAGGATGGTGAAGTCAGTGGGCAGTGTGGGCGACAGCCCCCGGGAGCCCCGCCGGACAGTCAGTGAGAGT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GTGATTGCCGTCAAGGCGAGCTTCCCATCCTCCGCTCTGCCCCCACGCACTGGCGTGGCCCTGGGCCGGAAGCT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GGGTTCTCATTCCGTGGCCAGCTGTGCTCCACAGCTCCTTGGGGACAGGAGAGTAGATGCTGGCCACACAGATC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AGCCAGTTCCGTCTGGCTCAGTGGGGGGCCCCGCCAGACCGGCCTCAGGACCCAGGCAGGCCCGGGAGGCCTCG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CTGGTTGTGACCTGTCGAACTAACAAGTTCCGGAAAAACAACTACAAATGGGTGGCTGCCTCCTCGAAGAGTCC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CCGGGTTGCTCGGAGGGCCCTCAGTCCCAGAGTGGCTGCAGAGAATGTGTGCAAGGCCTCTGCTGGCATGGCAA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ACAAGGTGGAGAAGCCGCAGCTCATAGCTGACCCAGAGCCCAAGCCCAGGAAGCCAGCCACGTCCTCCAAGCCA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GGGTCTGCCCCCAGCAAGTACAAGTGGAAGGCCTCCAGCCCCTCTGCCTCCTCCTCTTCCTCCTTCCGTTGGCA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GTCGGAGGCCAGCAGCAAGGACCATGCCTCCCAGCTCTCCCCAGTCCTGTCTAGGTCCCCGTCGGGGGACAGAC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CAGCAGTAGGACACAGTGGCTTGAAGCCCCTCTCTGGGGAGACCCCGCTCTCGGCTTACAAAGTGAAGAGCCGC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 ACCAAGATCATCCGGAGACGCAGCAGCACAAGCCTTCCTGGAGACAAGAAAAGCGGCACCTCACCTGCCGCCAC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CGCCAAGAGCCACCTCAGCCTCCGGCGGAGACAGGCCCTCAGGGGGAAGAGCAGCCCTGTCCTGAAGAAGACCC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CCAACAAGGGCCTGGTACAGGTCACCACGCACCGACTATGTCGCCTGCCACCGAGCCGGGCCCACCTCCCCACC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 AAGGAAGCGTCCAGCCTGCATGCCGTGCGGACTGCACCCACCAGCAAGGTGATCAAGACCCGCTACCGCATTGT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CAAGAAGACGCCGGCCTCGCCTCTCAGCGCCCCGCCCTTCCCCCTGTCTCTGCCCTCCTGGCGGGCCCGGCGGC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TCTCACTATCCAGGTCCCTGGTGCTGAACCGCCTGCGTCCAGTTGCCAGCGGGGGTGGGAAAGCCCAACCGGGC 1776
Query 1 ---------------------------------AT-GGAG---------------------------------C 7
|| |||| |
Sbjct 1777 TCCCCTTGGTGGCGGAGCAAAGGCTACCGCTGCATCGGAGGGGTCCTCTACAAAGTATCTGCCAACAAGCTCTC 1850
Query 8 CAGGA-----GGAGAGCCCACAGGTGCTAAAGAG-AGCAGTACCCTGATGGAGTCCCTTG----CAGGCCGGCT 71
||.|| ||..||||||..|.||| |.| |||||..|||| |.|| ||||||||||
Sbjct 1851 CAAGACCTCCGGCCAGCCCAGTGATGC----GGGCAGCAGGCCCCT----------CCTGCGCACAGGCCGGCT 1910
Query 72 GGATCCTGCAGGCAGCTGTAGCCGTTCCCTGGCCAGCCGGGCAGTGCAGCGCAGCCTGGCCATCATCCGGCAGG 145
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1911 GGATCCTGCAGGCAGCTGTAGCCGTTCCCTGGCCAGCCGGGCAGTGCAGCGCAGCCTGGCCATCATCCGGCAGG 1984
Query 146 CGCGGCAGCGCAGGGAGAAGAGGAAGGAGTACTGCATGTACTACAACCGCTTCGGCAGGTGCAACCGTGGCGAG 219
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1985 CGCGGCAGCGCAGGGAGAAGAGGAAGGAGTACTGCATGTACTACAACCGCTTCGGCAGGTGCAACCGTGGCGAG 2058
Query 220 CGCTGCCCCTACATCCACGATCCCGAGAAGGTGGCCGTGTGCACCAGGTTTGTCCGGGGCACCTGCAAGAAAAC 293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2059 CGCTGCCCCTACATCCACGATCCCGAGAAGGTGGCCGTGTGCACCAGGTTTGTCCGGGGCACCTGCAAGAAAAC 2132
Query 294 GGATGGGACCTGCCCCTTCTCCCACCATGTGTCCAAGGAGAAGATGCCGGTGTGCTCCTACTTCCTGAAGGGCA 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2133 GGATGGGACCTGCCCCTTCTCCCACCATGTGTCCAAGGAGAAGATGCCGGTGTGCTCCTACTTCCTGAAGGGCA 2206
Query 368 TCTGCAGCAACAGCAACTGTCCCTATAGCCACGTGTACGTGTCCCGCAAGGCCGAGGTCTGCAGCGACTTCCTC 441
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2207 TCTGCAGCAACAGCAACTGTCCCTATAGCCACGTGTACGTGTCCCGCAAGGCCGAGGTCTGCAGCGACTTCCTC 2280
Query 442 AAAGGCTACTGCCCCCTGGGTGCAAAGTGCAAGAAGAAACACACGCTGCTGTGCCCCGACTTTGCCCGCAGGGG 515
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2281 AAAGGCTACTGCCCCCTGGGTGCAAAGTGCAAGAAGAAACACACGCTGCTGTGCCCCGACTTTGCCCGCAGGGG 2354
Query 516 GGCGTGTCCCCGCGGCGCCCAGTGCCAGCTGCTCCACCGTACCCAGAAACGCCACAGTCGGCGGGCAGCCACGT 589
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2355 GGCGTGTCCCCGCGGCGCCCAGTGCCAGCTGCTCCACCGTACCCAGAAACGCCACAGTCGGCGGGCAGCCACGT 2428
Query 590 CCCCCGCCCCAGGGCCCAGCGACGCAACCGCCAGGAGCAGGGTCTCGGCCAGCCACGGGCCCAGGAAGCCTTCA 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2429 CCCCCGCCCCAGGGCCCAGCGACGCAACCGCCAGGAGCAGGGTCTCGGCCAGCCACGGGCCCAGGAAGCCTTCA 2502
Query 664 GCATCCCAGCGCCCCACCAGGCAGACGCCCAGCTCGGCTGCCCTCACTGCGGCTGCCGTGGCTGCACCTCCCCA 737
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2503 GCATCCCAGCGCCCCACCAGGCAGACGCCCAGCTCGGCTGCCCTCACTGCGGCTGCCGTGGCTGCACCTCCCCA 2576
Query 738 CTGCCCAGGGGGGTCAGCCTCTCCCTCATCCTCGAAGGCTTCCTCCTCCTCCTCCTCCTCCTCATCCCCTCCCG 811
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2577 CTGCCCAGGGGGGTCAGCCTCTCCCTCATCCTCGAAGGCTTCCTCCTCCTCCTCCTCCTCCTCATCCCCTCCCG 2650
Query 812 CTTCCTTGGACCACGAGGCACCATCTCTCCAGGAGGCTGCCTTAGCAGCAGCGTGCTCCAACAGGCTCTGCAAG 885
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2651 CTTCCTTGGACCACGAGGCACCATCTCTCCAGGAGGCTGCCTTAGCAGCAGCGTGCTCCAACAGGCTCTGCAAG 2724
Query 886 CTGCCTTCCTTCATCTCCCTGCAGTCCTCGCCGAGCCCAGGAGCCCAGCCCAGGGTCCGGGCCCCTAGGGCCCC 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2725 CTGCCTTCCTTCATCTCCCTGCAGTCCTCGCCGAGCCCAGGAGCCCAGCCCAGGGTCCGGGCCCCTAGGGCCCC 2798
Query 960 CCTCACCAAGGACTCAGGGAAGCCTCTGCACATCAAACCACGTCTG 1005
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2799 CCTCACCAAGGACTCAGGGAAGCCTCTGCACATCAAACCACGTCTG 2844
