Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11705
- Subject:
- XM_011541075.2
- Aligned Length:
- 2655
- Identities:
- 613
- Gaps:
- 2019
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGCGGGCGGCCGACTCGGGCTCGTGGGAGCGCGTCCGCCAGCTCGCGGCGCAGGGCGAGCCGGCGCCTTCCTG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CGGGGCGGGGGCCGGGCCCGCGCGGCCCCCGGGACCCGCAGCCTGCGAGCAGTGCGTGGACGCGGCGGGGCCCG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCGATCGGCCCCGCGCCGGGGTTCCCCGGGTCCGAGCGGATGGCGACTGCAGCCAGCCCGTGCTCCTGCGGGAA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GAAGTGTCGCGGCTCCAGGAGGAAGTTCACCTTCTCCGGCAGATGAAGGAGATGTTGGCGAAGGACCTGGAGGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GTCGCAGGGCGGCAAGTCCTCTGAGGTCCTCTCGGCCACCGAGCTCAGGGTCCAGCTGGCCCAGAAGGAGCAGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AGCTAGCCAGAGCCAAAGAAGCCTTGCAGGCCATGAAAGCTGATCGGAAGCGCTTAAAGGGCGAGAAGACAGAC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CTGGTGAGCCAGATGCAGCAGCTGTATGCCACACTGGAGAGCCGCGAGGAGCAGCTCCGAGACTTCATCCGCAA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CTATGAGCAGCACCGCAAGGAGAGCGAGGATGCGGTCAAAGCGCTGGCCAAGGAGAAGGACCTGCTGGAGCGTG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AGAAGTGGGAGCTGCGGCGCCAAGCCAAGGAGGCCACAGACCACGCCACGGCACTGCGCTCCCAGCTGGACCTC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AAGGACAACCGGATGAAGGAGCTGGAGGCCGAGCTGGCCATGGCCAAACAGTCCTTAGCTACGCTGACCAAGGA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CGTCCCCAAGCGGCATTCCCTCGCCATGCCGGGCGAGACGGTGCTCAATGGCAACCAGGAGTGGGTGGTGCAGG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CGGACCTCCCGCTGACCGCAGCCATCCGGCAGAGTCAACAGACTCTCTACCACTCACACCCCCCTCACCCTGCG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GACCGGCAAGCGGTCAGGGTGAGCCCCTGCCACTCCCGGCAGCCCTCTGTCATCTCCGACGCATCTGCCGCCGA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AGGCGACCGGTCGTCCACACCGAGCGACATCAACTCCCCTCGACACCGGACACACTCCCTCTGCAACGGCGACA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GTCCCGGCCCAGTTCAGAAGAACCTGCACAACCCTATTGTACAGTCACTAGAGGATCTTGAAGACCAAAAACGG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AAAAAGAAGAAAGAGAAGATGGGATTCGGCTCCATCTCCCGCGTCTTCGCCAGAGGGAAGCAGCGGAAGTCCCT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CGACCCCGGCCTCTTTGATGACTCGGACAGCCAGTGCAGCCCCACGCGGCAGAGCCTCAGCCTGTCGGAAGGCG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 AGGAGCAGATGGACCGGCTGCAGCAGGTGGAGCTGGTGAGGACCACCCCTATGTCCCACTGGAAGGCGGGCACC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GTCCAGGCCTGGCTGGAGGTGGTGATGGCCATGCCTATGTACGTCAAGGCCTGCACGGAGAACGTGAAGAGCGG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GAAGGTGCTGCTGAGCCTGAGTGACGAGGACCTGCAGCTGGGCCTTGGGGTGTGCAGCTCCCTGCACCGGCGCA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AGCTGCGCCTGGCCATCGAGGACTACCGTGATGCCGAGGCAGGCCGCAGCCTGTCCAAAGCTGCCGAGCTGGAC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CATCACTGGGTGGCCAAGGCCTGGCTGAATGACATTGGCCTGTCCCAGTACTCCCAGGCCTTTCAGAACCACCT 1628
Query 1 -------------ATGCTGAATTCCCTGATGAAGCGAGACCTGGAGAAGCACCTGAACGTGTCCAAGAAGTTCC 61
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 GGTTGATGGGCGGATGCTGAATTCCCTGATGAAGCGAGACCTGGAGAAGCACCTGAACGTGTCCAAGAAGTTCC 1702
Query 62 ACCAGGTCAGCATCCTGCTGGGGATCGAGCTGCTGTACCAAGTGAACTTCAGCAGGGAGGCCCTCCAGGAGCGC 135
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 ACCAGGTCAGCATCCTGCTGGGGATCGAGCTGCTGTACCAAGTGAACTTCAGCAGGGAGGCCCTCCAGGAGCGC 1776
Query 136 CGGGCCCGCTGCGAGACGCAGAACATTGACCCCGTGGTGTGGACCAACCAGCGGGTGCTCAAGTGGGTTCGAGA 209
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 CGGGCCCGCTGCGAGACGCAGAACATTGACCCCGTGGTGTGGACCAACCAGCGGGTGCTCAAGTGGGTTCGAGA 1850
Query 210 CATCGACCTGAAGGAGTACGCAGACAACCTGACCAACAGCGGCGTCCATGGTGCTGTGCTGGTGCTGGAGCCCA 283
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 CATCGACCTGAAGGAGTACGCAGACAACCTGACCAACAGCGGCGTCCATGGTGCTGTGCTGGTGCTGGAGCCCA 1924
Query 284 CATTCAATGCCGAGGCCATGGCCACTGCCCTGGGCATCCCCAGTGGGAAGCACATCCTCCGGAGACACCTGGCA 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 CATTCAATGCCGAGGCCATGGCCACTGCCCTGGGCATCCCCAGTGGGAAGCACATCCTCCGGAGACACCTGGCA 1998
Query 358 GAGGAGATGAGCGCCGTCTTCCACCCAGCCAACTCCACAGGCATCCGGGAGGCTGAGCGTTTTGGAACGCCCCC 431
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 GAGGAGATGAGCGCCGTCTTCCACCCAGCCAACTCCACAGGCATCCGGGAGGCTGAGCGTTTTGGAACGCCCCC 2072
Query 432 TGGCAGGGCCTCCAGCGTCACGCGGACAGGAAAGGAGGAGAACAGCAGCGGTCTCAAGTACAAGGCTGGCCGG- 504
|||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 TGGCAGGGCCTCCAGCGTCACGCGGGCAGGAAAGGAGGAGAACAGCAGCGGTCTCAAGTACAAGGCTGGCCGGG 2146
Query 505 ------------------------------CTGC---CCCTGGGGAAGAT-------------------AG--- 523
|||| ||| |||.|||.| ||
Sbjct 2147 TAAGTCTCTCAATGGATTTACCTGTGAGTCCTGCAGACCC-GGGAAAGGTCTTTTTTTCTCCTCCCGGGAGCTC 2219
Query 524 ----------------------GAA------------------------GGGGCTTCAGCAGCAAAGATCCC-- 549
||| |||||.|| |||.|.||||.||
Sbjct 2220 TGTGGCTCCTGTGCTGGCCTGTGAAGGTGGAGTGCCAGGCCGGGTCACGGGGGCATC--CAGGACAGATGCCCT 2291
Query 550 -GAT-----TTCCATGATGACTATGGCTCTCTTCAAAACGAAGATTGCGG---AG---ACGATGACCCCCAGAG 611
||| |||.|.|| || |||| ||||.|.||..|| || ||.|.|.|||| |
Sbjct 2292 GGATGTACCTTCAAGGA--AC---------CTTC---ACGATGCTTTGGGTACAGTGCACAAAGCCCCC----G 2347
Query 612 CAGG--------------CTGGA----ACAGTGC-CGTCTGGAAGGCTACAACAGCCTGGAGG----TCACC-- 660
|||| ||||| |.||||| .|||| ||.|.|||||.|.| |||||
Sbjct 2348 CAGGGCTTCGAGTAGCACCTGGATCTCAAAGTGCAGGTCT---------CACCTGCCTGCATGAGAATCACCTG 2412
Query 661 ------------AACGTG-------------------------------------------------------- 666
|||.||
Sbjct 2413 GGGCTATTACTGAACTTGCAGATTCTGGGACCCACCTTGGTCTCCTGGAAAAGGAGTTCTCTGGGGCGAGGGGG 2486
Query 667 -------------------------------------------------------------------------- 666
Sbjct 2487 ATCCTGCATTCAGCTAGGCTGCCCAGAGGGTTCCGGCGCAGCCCCAAACTCTGAGCCCCAATCACTGATTTCAA 2560
Query 667 ----------------------------------------------------------------- 666
Sbjct 2561 TTTGCGACTTCAGTGACCTGACCAATAGCAAAGATGAACCCTCTGGTGACTCCAACCAAACAGTA 2625
