Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11713
- Subject:
- XM_024450681.1
- Aligned Length:
- 4164
- Identities:
- 1533
- Gaps:
- 2631
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAAGGAATTAAAGGAGGCCAGGCCGCGCAAAGATAACAGGCGTCCAGATCTGGAAATCTATAAGCCTGGCCT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TTCTCGGCTAAGGAACAAGCCCAAAATCAAGGAACCCCCTGGGAGTGAGGAATTCAAAGATGAAATTGTTAATG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ACCGAGATTGCTCTGCTGTTGAAAATGGTACACAGCCCGTTAAAGATGTCTGCAAGGAACTGAACAACCAAGAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CAGAATGGTCCTATAGACCCAGAAAATAATCGGGGACAAGAATCCTTTCCTAGGACTGCTGGACAAGAGGATCG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TAGTCTAAAAATTATCAAAAGAACAAAGAAACCCGACCTGCAGATCTATCAGCCTGGACGACGTTTGCAGACTG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TTAGCAAAGAATCCGCCAGTCGGGTGGAGGAGGAAGAAGTCCTCAACCAGGTAGAACAACTGAGAGTAGAGGAA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GATGAGTGTAGGGGAAATGTTGCGAAGGAGGAAGTTGCGAATAAACCAGACAGGGCTGAGATAGAAAAGAGCCC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AGGTGGTGGGAGAGTAGGGGCTGCAAAAGGAGAAAAAGGAAAGAGGATGGGAAAAGGGGAGGGGGTGAGGGAAA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CCCACGACGACCCAGCCCGCGGGAGGCCGGGCTCCGCAAAGCGCTACTCCCGCTCAGACAAACGAAGGAATCGC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TACCGCACGCGCAGCACCAGCTCAGCTGGCAGCAACAACAGCGCTGAGGGAGCTGGCCTGACGGATAATGGATG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TCGCCGCCGCCGACAGGATAGGACCAAGGAGAGGCCACGACTGAAGAAGCAAGTGTCTGTGTCCTCAACCGATT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CCTTAGACGAGGACAGAATTGATGAGCCTGATGGATTAGGACCCAGGAGAAGTTCAGAAAGGAAGAGACATTTA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GAAAGAAACTGGTCTGGCCGTGGGGAGGGTGAGCAGAAAAACAGTGCTAAAGAATATCGAGGCACTCTTCGTGT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CACTTTCGATGCAGAAGCCATGAACAAAGAGTCTCCCATGGTGAGGTCAGCCAGGGATGATATGGATAGAGGAA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AGCCTGACAAAGGCTTGAGCAGTGGGGGCAAAGGCTCTGAGAAGCAGGAGTCCAAAAACCCGAAACAAGAACTT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CGGGGTCGTGGTCGTGGCATTCTGATTTTGCCTGCCCATACCACCCTATCTGTCAATTCAGCAGGTTCTCCAGA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GTCCGCGCCTTTGGGACCTCGGCTTTTGTTTGGATCTGGTAGTAAGGGATCTCGGAGTTGGGGCCGTGGAGGCA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CCACACGCCGATTGTGGGACCCAAACAATCCTGATCAGAAACCTGCTCTAAAGACTCAGACGCCCCAGCTACAT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TTCTTGGACACTGATGATGAAGTCAGCCCTACATCTTGGGGTGACTCACGCCAGGCTCAGGCATCTTACTATAA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GTTTCAAAACTCTGACAACCCCTATTATTACCCCCGGACACCAGGCCCTGCCTCCCAGTATCCCTATACGGGCT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 ATAACCCTCTACAGTACCCAGTGGGCCCTACGAATGGTGTGTACCCAGGGCCTTACTACCCAGGCTACCCGACT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CCGTCAGGACAGTATGTGTGTAGCCCTCTACCTACCAGCACCATGAGTCCCGAGGAGGTAGAGCAGCACATGAG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GAACCTGCAGCAACAGGAGCTGCACAGGCTTCTCCGGGTGGCTGACAACCAGGAACTGCAGCTCAGCAACCTGC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TCTCCAGGGACCGCATCAGTCCGGAGGGCCTGGAGAAGATGGCGCAACTCAGAGCTGAACTGCTGCAGCTATAT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GAGCGCTGTATTCTATTAGATATTGAGTTCTCTGATAATCAGAATGTGGATCAGATCCTGTGGAAGAATGCTTT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CTATCAGGTGATTGAGAAGTTCAGGCAACTTGTCAAGGATCCGAATGTTGAGAACCCAGAACAGATTCGGAACA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 GACTTTTGGAGCTCTTGGATGAGGGTAGTGACTTCTTTGATAGTTTGCTTCAGAAGCTGCAGGTTACTTACAAG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 TTCAAACTGGAAGACTACATGGATGGTCTTGCCATTCGCAGCAAGCCATTACGCAAGACAGTAAAATATGCCTT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 GATCAGTGCCCAGCGATGCATGATATGCCAAGGAGATATTGCTAGGTACCGGGAGCAAGCCAGTGATACAGCGA 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 ATTATGGGAAAGCACGCAGTTGGTACCTGAAGGCCCAGCACATTGCTCCCAAGAATGGGCGCCCCTATAACCAG 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 TTGGCTTTGCTGGCAGTGTATACGAGGAGGAAGCTTGACGCTGTCTATTACTATATGCGCAGTTTAGCTGCCAG 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 CAACCCTATCCTGACTGCCAAGGAGAGTCTCATGAGCTTGTTTGAAGAGACCAAGCGGAAGGCAGAACAGATGG 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 AAAAGAAGCAACATGAGGAATTTGACCTGAGCCCTGACCAGTGGCGGAAAGGAAAGAAGTCTACTTTCCGGCAT 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 GTTGGAGATGACACCACTCGCCTGGAGATCTGGATTCATCCATCCCATCCACGGTCTTCCCAGGGCACTGAGTC 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 TGGGAAGGATTCTGAGCAAGAGAATGGGCTGGGCAGCCTGAGTCCCAGTGATCTGAACAAAAGGTTCATCCTCA 2590
Query 1 -----------------------------------------ATGGAGACATTCCCTGCAGTGGCTGAGAAGGTC 33
|||||||||||||||||||||||||||||||||
Sbjct 2591 GTTTTCTCCATGCCCATGGGAAGCTGTTTACCCGGATTGGGATGGAGACATTCCCTGCAGTGGCTGAGAAGGTC 2664
Query 34 CTCAAGGAGTTCCAGGTGTTACTGCAGCACAGCCCCTCTCCCATTGGAAGTACCCGCATGCTGCAGCTTATGAC 107
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2665 CTCAAGGAGTTCCAGGTGTTACTGCAGCACAGCCCCTCTCCCATTGGAAGTACCCGCATGCTGCAGCTTATGAC 2738
Query 108 CATCAATATGTTTGCAGTACACAACTCCCAGCTGAAAGACTGCTTCTCGGAGGAGTGCCGCTCTGTGATCCAGG 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2739 CATCAATATGTTTGCAGTACACAACTCCCAGCTGAAAGACTGCTTCTCGGAGGAGTGCCGCTCTGTGATCCAGG 2812
Query 182 AACAAGCCGCAGCTCTGGGCTTGGCCATGTTTTCTCTACTGGTCCGCCGCTGCACCTGCTTACTTAAGGAGTCC 255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2813 AACAAGCCGCAGCTCTGGGCTTGGCCATGTTTTCTCTACTGGTCCGCCGCTGCACCTGCTTACTTAAGGAGTCC 2886
Query 256 GCCAAAGCTCAGCTGTCCTCTCCTGAGGACCAGGATGACCAAGACGACATCAAGGTGTCTTCCTTTGTCCCGGA 329
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2887 GCCAAAGCTCAGCTGTCCTCTCCTGAGGACCAGGATGACCAAGACGACATCAAGGTGTCTTCCTTTGTCCCGGA 2960
Query 330 CCTGAAGGAGCTGCTCCCCAGTGTCAAAGTCTGGTCAGATTGGATGCTCGGCTACCCGGACACCTGGAATCCTC 403
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2961 CCTGAAGGAGCTGCTCCCCAGTGTCAAAGTCTGGTCAGATTGGATGCTCGGCTACCCGGACACCTGGAATCCTC 3034
Query 404 CTCCCACATCCCTGGATCTGCCCTCGCATGTTGCTGTGGATGTATGGTCGACGCTGGCTGATTTCTGTAACATA 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3035 CTCCCACATCCCTGGATCTGCCCTCGCATGTTGCTGTGGATGTATGGTCGACGCTGGCTGATTTCTGTAACATA 3108
Query 478 CTGACTGCAGTGAATCAGTCTGAGGTGCCACTGTACAAGGACCCGGATGATGACCTCACCCTTCTTATCCTGGA 551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3109 CTGACTGCAGTGAATCAGTCTGAGGTGCCACTGTACAAGGACCCGGATGATGACCTCACCCTTCTTATCCTGGA 3182
Query 552 AGAGGATCGGCTTCTCTCGGGCTTTGTCCCCTTGCTGGCTGCCCCTCAGGACCCCTGCTACGTGGAGAAAACCT 625
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3183 AGAGGATCGGCTTCTCTCGGGCTTTGTCCCCTTGCTGGCTGCCCCTCAGGACCCCTGCTACGTGGAGAAAACCT 3256
Query 626 CGGATAAGGTTATTGCAGCTGACTGCAAAAGGGTCACAGTGCTGAAGTATTTTCTGGAAGCCCTTTGTGGACAA 699
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3257 CGGATAAGGTTATTGCAGCTGACTGCAAAAGGGTCACAGTGCTGAAGTATTTTCTGGAAGCCCTTTGTGGACAA 3330
Query 700 GAAGAGCCTCTGCTGGCATTCAAGGGTGGAAAGTATGTGTCAGTGGCACCCGTCCCAGACACCATGGGAAAGGA 773
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3331 GAAGAGCCTCTGCTGGCATTCAAGGGTGGAAAGTATGTGTCAGTGGCACCCGTCCCAGACACCATGGGAAAGGA 3404
Query 774 AATGGGAAGCCAAGAGGGAACACGACTGGAAGATGAGGAGGAGGATGTGGTGATTGAAGACTTTGAGGAAGATT 847
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3405 AATGGGAAGCCAAGAGGGAACACGACTGGAAGATGAGGAGGAGGATGTGGTGATTGAAGACTTTGAGGAAGATT 3478
Query 848 CAGAGGCTGAAGGCAGCGGAGGCGAGGATGACATCAGGGAGCTTCGGGCCAAGAAGCTGGCTCTGGCCAGGAAG 921
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3479 CAGAGGCTGAAGGCAGCGGAGGCGAGGATGACATCAGGGAGCTTCGGGCCAAGAAGCTGGCTCTGGCCAGGAAG 3552
Query 922 ATAGCTGAGCAGCAGCGTCGCCAGGAAAAGATCCAGGCTGTCCTGGAGGACCACAGTCAGATGAGGCAGATGGA 995
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3553 ATAGCTGAGCAGCAGCGTCGCCAGGAAAAGATCCAGGCTGTCCTGGAGGACCACAGTCAGATGAGGCAGATGGA 3626
Query 996 GCTCGAAATCAGACCTTTGTTCCTCGTACCAGACACCAACGGCTTCATTGACCACCTGGCCAGTCTGGCGCGGC 1069
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3627 GCTCGAAATCAGACCTTTGTTCCTCGTACCAGACACCAACGGCTTCATTGACCACCTGGCCAGTCTGGCGCGGC 3700
Query 1070 TGCTGGAGAGCAGGAAGTACATCCTGGTGGTGCCCCTCATCGTGATCAATGAGCTGGACGGCCTGGCCAAGGGG 1143
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3701 TGCTGGAGAGCAGGAAGTACATCCTGGTGGTGCCCCTCATCGTGATCAATGAGCTGGACGGCCTGGCCAAGGGG 3774
Query 1144 CAGGAGACAGACCACCGGGCTGGGGGCTACGCCCGTGTGGTACAAGAGAAGGCCCGCAAGTCCATCGAGTTCCT 1217
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3775 CAGGAGACAGACCACCGGGCTGGGGGCTACGCCCGTGTGGTACAAGAGAAGGCCCGCAAGTCCATCGAGTTCCT 3848
Query 1218 CGAGCAGCGATTCGAGAGTCGGGACTCTTGCCTGCGAGCCCTGACCAGCCGTGGCAATGAACTCGAATCCATCG 1291
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3849 CGAGCAGCGATTCGAGAGTCGGGACTCTTGCCTGCGAGCCCTGACCAGCCGTGGCAATGAACTCGAATCCATCG 3922
Query 1292 CCTTCCGCAGTGAGGACATCACTGGCCAGCTGGGTAACAACGATGATCTCATCCTGTCCTGCTGCCTCCACTAC 1365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3923 CCTTCCGCAGTGAGGACATCACTGGCCAGCTGGGTAACAACGATGATCTCATCCTGTCCTGCTGCCTCCACTAC 3996
Query 1366 TGCAAAGACAAGGCTAAGGACTTCATGCCCGCCAGCAAAGAGGAGCCAATCCGGCTACTGCGGGAGGTGGTGCT 1439
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3997 TGCAAAGACAAGGCTAAGGACTTCATGCCCGCCAGCAAAGAGGAGCCAATCCGGCTACTGCGGGAGGTGGTGCT 4070
Query 1440 GTTGACGGATGACCGGAACCTGCGTGTGAAGGCGCTCACAAGGAATGTTCCTGTACGGGACATCCCAGCCTTCC 1513
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4071 GTTGACGGATGACCGGAACCTGCGTGTGAAGGCGCTCACAAGGAATGTTCCTGTACGGGACATCCCAGCCTTCC 4144
Query 1514 TCACGTGGGCCCAGGTGGGC 1533
||||||||||||||||||||
Sbjct 4145 TCACGTGGGCCCAGGTGGGC 4164
