Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11737
- Subject:
- XR_002957301.1
- Aligned Length:
- 5395
- Identities:
- 1573
- Gaps:
- 3810
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TCCGACCTTGCAGCGGCGCAGCGCGGGTGGGAGGCGGGGAGGAGCAGCGGGAAGAGCGGAGCGAGGACCGCGTC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CGGCGCAGTCTTCAATGAGCAGCGCGGAAACTGCACCCCAGACCCGAGCCTGCTGCGCGCCCCCTCCCAGAGCT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CACCTGGTGCCAGGTAACAGGCCTGGCCTCGCCCTGTGGATGATGATGGCCTTGCCCCCGTGAGCTACAACCTG 222
Query 1 ---------------------------------ATGCGGCTGTGGAAGGCGGTGGTGGTGACTTTGGCCTTCAT 41
|||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GCCTTCAGCACCCGCCCACCTCCAACCAGCAGGATGCGGCTGTGGAAGGCGGTGGTGGTGACTTTGGCCTTCAT 296
Query 42 GAGTGTGGACATCTGCGTGACCACGGCCATCTATGTCTTCAGCCACCTGGACCGCAGCCTCCTGGAGGACATCC 115
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GAGTGTGGACATCTGCGTGACCACGGCCATCTATGTCTTCAGCCACCTGGACCGCAGCCTCCTGGAGGACATCC 370
Query 116 GCCACTTCAACATCTTTGACTCGGTGCTGGATCTCTGGGCAGCCTGCCTGTACCGCAGCTGCCTGCTGCTGGGA 189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GCCACTTCAACATCTTTGACTCGGTGCTGGATCTCTGGGCAGCCTGCCTGTACCGCAGCTGCCTGCTGCTGGGA 444
Query 190 GCCACCATTGGTGTGGCCAAGAACAGTGCGCTGGGGCCCCGGCGGCTGCGGGCCTCGTGGCTGGTCATCACCCT 263
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GCCACCATTGGTGTGGCCAAGAACAGTGCGCTGGGGCCCCGGCGGCTGCGGGCCTCGTGGCTGGTCATCACCCT 518
Query 264 CGTGTGCCTCTTCGTGGGCATCTATGCCATGGTGAAGCTGCTGCTCTTCTCAGAGGTGCGCAGGCCCATCCGGG 337
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CGTGTGCCTCTTCGTGGGCATCTATGCCATGGTGAAGCTGCTGCTCTTCTCAGAGGTGCGCAGGCCCATCCGGG 592
Query 338 ACCCCTGGTTTTGGGCCCTGTTCGTGTGGACGTACATTTCACTCGGCGCATCCTTCCTGCTCTGGTGGCTGCTG 411
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 ACCCCTGGTTTTGGGCCCTGTTCGTGTGGACGTACATTTCACTCGGCGCATCCTTCCTGCTCTGGTGGCTGCTG 666
Query 412 TCCACCGTGCGGCCAGGCACCCAGGCCCTGGAGCCAGGGGCGGCCACCGAGGCTGAGGGCTTCCCTGGGAGCGG 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TCCACCGTGCGGCCAGGCACCCAGGCCCTGGAGCCAGGGGCGGCCACCGAGGCTGAGGGCTTCCCTGGGAGCGG 740
Query 486 CCGGCCACCGCCCGAGCAGGCGTCTGGGGCCACGCTGCAGAAGCTGCTCTCCTACACCAAGCCCGACGTGGCCT 559
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CCGGCCACCGCCCGAGCAGGCGTCTGGGGCCACGCTGCAGAAGCTGCTCTCCTACACCAAGCCCGACGTGGCCT 814
Query 560 TCCTCGTGGCCGCCTCCTTCTTCCTCATCGTGGCAGCTCTGGGAGAGACCTTCCTGCCCTACTACACGGGCCGC 633
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TCCTCGTGGCCGCCTCCTTCTTCCTCATCGTGGCAGCTCTGGGAGAGACCTTCCTGCCCTACTACACGGGCCGC 888
Query 634 GCCATTGATGGCATCGTCATCCAGAAAAGCATGGATCAGTTCAGCACGGCTGTCGTCATCGTGTGCCTGCTGGC 707
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 GCCATTGATGGCATCGTCATCCAGAAAAGCATGGATCAGTTCAGCACGGCTGTCGTCATCGTGTGCCTGCTGGC 962
Query 708 CATTGGCAGCTCATTTGCCGCAGGTATTCGGGGCGGCATTTTTACCCTCATATTTGCCAGACTGAACATTCGCC 781
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 CATTG--------------GCAGGTATTCGGGGCGGCATTTTTACCCTCATATTTGCCAGACTGAACATTCGCC 1022
Query 782 TTCGAAACTGTCTCTTCCGCTCACTGGTGTCCCAGGAGACAAGCTTCTTTGATGAGAACCGCACAGGGGACCTC 855
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1023 TTCGAAACTGTCTCTTCCGCTCACTGGTGTCCCAGGAGACAAGCTTCTTTGATGAGAACCGCACAGGGGACCTC 1096
Query 856 ATCTCCCGCCTGACCTCGGACACCACCATGGTCAGCGACCTGGTCTCCCAGAACATCAATGTCTTCCTGCGGAA 929
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1097 ATCTCCCGCCTGACCTCGGACACCACCATGGTCAGCGACCTGGTCTCCCAGAACATCAATGTCTTCCTGCGGAA 1170
Query 930 CACAGTCAAGGTCACGGGCGTGGTGGTCTTCATGTTCAGCCTCTCATGGCAGCTCTCCTTGGTCACCTTCATGG 1003
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1171 CACAGTCAAGGTCACGGGCGTGGTGGTCTTCATGTTCAGCCTCTCATGGCAGCTCTCCTTGGTCACCTTCATGG 1244
Query 1004 GCTTCCCCATCATCATGATGGTGTCCAACATCTACGGCAAGTACTACAAGAGGCTCTCCAAAGAGGTCCAGAAT 1077
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1245 GCTTCCCCATCATCATGATGGTGTCCAACATCTACGGCAAGTACTACAAGAGGCTCTCCAAAGAGGTCCAGAAT 1318
Query 1078 GCCCTGGCCAGAGCGAGCAACACGGCGGAGGAGACCATCAGTGCCATGAAGACTGTCCGGAGCTTCGCCAATGA 1151
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1319 GCCCTGGCCAGAGCGAGCAACACGGCGGAGGAGACCATCAGTGCCATGAAGACTGTCCGGAGCTTCGCCAATGA 1392
Query 1152 GGAGGAGGAGGCAGAGGTGTACCTGCGGAAGCTGCAGCAGGTGTACAAGCTGAACAGGAAGGAGGCAGCTGCCT 1225
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1393 GGAGGAGGAGGCAGAGGTGTACCTGCGGAAGCTGCAGCAGGTGTACAAGCTGAACAGGAAGGAGGCAGCTGCCT 1466
Query 1226 ACATGTACTACGTCTGGGGCAGCGGGCTCACACTGCTGGTGGTCCAGGTCAGCATCCTCTACTACGGGGGCCAC 1299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1467 ACATGTACTACGTCTGGGGCAGCGGGCTCACACTGCTGGTGGTCCAGGTCAGCATCCTCTACTACGGGGGCCAC 1540
Query 1300 CTTGTCATCTCAGGCCAGATGACCAGCGGCAACCTCATCGCCTTCATCATCTACGAGTTTGTCCTGGGAGATTG 1373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1541 CTTGTCATCTCAGGCCAGATGACCAGCGGCAACCTCATCGCCTTCATCATCTACGAGTTTGTCCTGGGAGATTG 1614
Query 1374 TATGGAGTCCGTGGGCTCCGTCTACAGTGGCCTGATGCAGGGAGTGGGGGCTGCTGAGAAGGTGTTCGAGTTCA 1447
|||||
Sbjct 1615 TATGG--------------------------------------------------------------------- 1619
Query 1448 TCGACCGGCAGCCGACCATGGTGCACGATGGCAGCTTGGCCCCCGACCACCTGGAGGGCCGGGTGGACTTTGAG 1521
Sbjct 1620 -------------------------------------------------------------------------- 1619
Query 1522 AATGTGACCTTCACCTACCGCACTCGGCCCCACACCCAGGTCCTGCAGAATGTCTCCTTCAGCCTGTCCCCCGG 1595
||||||||||||||||||||||||||||
Sbjct 1620 ----------------------------------------------AGAATGTCTCCTTCAGCCTGTCCCCCGG 1647
Query 1596 CAAGGTGACGGCCCTGGTGGGGCCCTCGGGCAGTGGGAAGAGCTCCTGTGTCAACATCCTGGAGAACTTCTACC 1669
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1648 CAAGGTGACGGCCCTGGTGGGGCCCTCGGGCAGTGGGAAGAGCTCCTGTGTCAACATCCTGGAGAACTTCTACC 1721
Query 1670 CCCTGGAGGGGGGCCGGGTGCTGCTGGACGGCAAGCCCATCAGCGCCTACGACCACAAGTACTTGCACCGTGTG 1743
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1722 CCCTGGAGGGGGGCCGGGTGCTGCTGGACGGCAAGCCCATCAGCGCCTACGACCACAAGTACTTGCACCGTGTG 1795
Query 1744 GTAT-----GTG---CACGGGCCTGGGC----------------CAC-----ACTTCTCC--------GCCCTT 1780
.|.| ||| ||.|.|||.|.|| ||| ||.||||| ||||..
Sbjct 1796 ATCTCCCTGGTGAGCCAGGAGCCCGTGCTGTTCGCCCGCTCCATCACGGATAACATCTCCTACGGCCTGCCCAC 1869
Query 1781 TCTGCATC------------------------------------------------------------------ 1788
|.|||.|.
Sbjct 1870 TGTGCCTTTCGAGATGGTGGTGGAGGCCGCACAGAAGGCCAATGCCCACGGCTTCATCATGGAACTCCAGGACG 1943
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 1944 GCTACAGCACAGAGACAGGGGAGAAGGGCGCCCAGCTGTCAGGTGGCCAGAAGCAGCGGGTGGCCATGGCCCGG 2017
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 2018 GCTCTGGTGCGGAACCCCCCAGTCCTCATCCTGGATGAAGCCACCAGCGCTTTGGATGCCGAGAGCGAGTATCT 2091
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 2092 GATCTGAATGACCAGCCTGCAGATATCAGAACCGAGATGGATTGATGATGATGACAATGATAACCATTCAGTTG 2165
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 2166 TCACTAAGGGCTGCTTGTTGCACCTCAGGAGCTGGGGATAGTGAAGGAGATACCTGTGCTGAGTCACTAACAGG 2239
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 2240 AAAGGGCTGAGAAAGAAGCATCGCCAATGGTTTCTCTTTCCTGGTTTTTATTCTTTCCTCAGAGAGGAGGAAGT 2313
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 2314 TGACCATTTAAACAGGTGAGTTGGCTGGGCGTGGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCCGAGG 2387
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 2388 CAGGCGGACCACTTGAGGTCAGGAGTTGGAGACCAGCCTGGCCAACATGGTGAAAACTCATCTCTACTAAAAAC 2461
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 2462 ACAAAAATTAGCCAGGTGTGGTGGGGAGGCTGAGGCAGGAGAATCACTTGAACCCGGGAGGCAGAGGTGGCAGT 2535
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 2536 GAGCCGAGATTGTGCCTCTGAACTCCAGCCTGGACGACAGAGTGAGACTCCATCTAAAATAAATAAATAAATAA 2609
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 2610 ATAAATAAATAAATAAATAAATAAACAAACAAACAGATGAGTCACCCAGGGGGAGGTCCTAACAGCGACCTAAG 2683
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 2684 GTGACAGTGACAGTGCCTCACATTATTACAGCTCTTTACCTTTGACTACCTGAGATCAGTCATTCAGTAAGCAT 2757
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 2758 TTATTGAGAACCTCCGTCTACCAGAAACTGTGCTAGGTTGTGGGTCACAGTGGAGACTAAGAGGTCCGAGATCA 2831
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 2832 CCTACATCCTACTGGGTAATAAACTCCAGATGGTGAAAAGATGGCAGCAGACAAGAGAGTGACTTGGGAGAGGA 2905
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 2906 GCACTGTTTGAGCTGGGGTGGTCTGGGGAGGTGATATGGGAGCTGAGCCCTGAATGACAAGGAGGTACCAGCTT 2979
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 2980 TGGGTATCTAGAGGAAAGAATGATCCCAACCACAGTCTGGCACTTCCTCAAAAAGCTCAACATGGACCTGGGCA 3053
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 3054 CAGTGGCTCACAGTTGTAATCCCAGCACTTTGGGAGGCTGAGGCGGGAGGATTGCTTGAAGCCAGGAGTTTGAG 3127
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 3128 AACAGCCTGGGCAACATAGTGGGACCCCATCCCTACAAAAATTTAAAAATCAGCCAGGCGTGGTAGTGCATACC 3201
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 3202 GGTCGTCCCAGCTACTTGTGTGGCTGAGGCAGGAGGATCCTTTGAGCTCAAGGAGGTTGAGGCTGCAACGAACC 3275
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 3276 ATGGTGGTGCCACTGCACTCCAGCCTGGATGACAGAGTGAGACCTCGTCTCTAAAAATAATAAAATAAAGCCAA 3349
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 3350 AAAGTGCAAACAATCCAATGTATGAATGGATAAACAAACTGCAAACCGTGGTATGCACATACTGTGGGATATGA 3423
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 3424 TTCAGCTGTAGAAAGGAATGAAGTGCTGGTACATGCTATAACATAGATGGTCCTTAGAAGCATTATGCAAATGA 3497
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 3498 AAGATGCCAGGCAGGGAAGGTCACCTATGGTATGATTCTTTTTACATGATATATTCAGAAGAAGCAAATCTATA 3571
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 3572 GGGATAGAAAGCAGATTAGAGGTTACCAGGGCATGGGGAGGGAGGAATGGGGAGTGACTGCTTGCTGGATACAA 3645
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 3646 GATGTTTTTTACAGGGTGATGAGAAAGTTTGGAAGCTGGAGAGACCTGGTGTTTGCACAATATTGTGAATACAT 3719
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 3720 TTAATACCAATGCATTTGTACACTTTAAAATGGGTAAGTGGCCAGGTGCAATGGCTCATGCCTGTAATCCCAGC 3793
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 3794 ACTTTAGGAGGCCGAAGTGGGAGGATCGCTTGAGCCCAGGAGTTCGAGACCAGCCTGGGCAACATAGGGAGACC 3867
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 3868 CCATCTCTACAAAAAATAAAATATTAGTCGTGCGTGGTGGCCTGTGCCTATAGTCCCAGTTACTTCACAGACTG 3941
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 3942 AGGGGGGATGATTGCTGGGCCCAGGAGTTTGAGGCTGGAGTGAGCCATGATTGTACCACTGCACTTCAGCCTGG 4015
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 4016 GTGACAGATTGAGACTCTGTCTCAAAAATAAAAAAGAAAAAAAGGTTAAGTGCATGTCATGTGAATTTCACCTC 4089
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 4090 ATCAAGGAAAAAAAAAAAAGATAAGTAGGGGAGGAGATGGATCCCACAAAGGATTGTGAAGTACAGAGACCTCC 4163
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 4164 AGACAGCAAGAGGTGGGACATCTGCCAAGCAGGACACGGCCAGGGGACAGAGTGGGGGGCACCCAAGGGAGGAA 4237
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 4238 GGAGGAGGGGACAGGAAGGCGAGGGCTCCTGGGGCCATGGCGAGGTAGTTGACTTTTATTTCATGAAAACTGGG 4311
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 4312 GGCATTGAAGGGTTCTGATCAGGGCGTGACCTGATTGATCCTTGGGCTCAGTGTGGAGAAGGTACTGGACGAGG 4385
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 4386 ACCCAGAGAAGTGGCTCCCCCAACACCCCGGGCAGCCAGGCCTGGGCTCACCCCACTCTGTAGATAAGGAAATG 4459
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 4460 CTGCCTGCAGAGGCTGCAGCCACGGTCTCATCGCCAAACCTTCTGCAACCCTTATTCAGCATGTCCTGCTGTTA 4533
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 4534 TTTATAGCTGAAGGAACCTTGCGAGTGGAGGGTGCATGGAGAAATGCTTCAAGGAATTTTCTGCTCTGCATACA 4607
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 4608 GCAACAAGCAGTGGCCAGCAAGGGCCCCGGGGCAGCAGCACAGGCCCACACAGACATGCAATAGAGGTCCTTTA 4681
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 4682 CCTCCCCTGGACCCAGGTCCATGCTGGGCACGCCCTGGCTGGGAAGAACTAATTCAGGGCAGTTACACAAGCGC 4755
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 4756 TGCCCGAGGCCCTGTGTTGACAAGGCCTGGTCAGCTGCCAGATAAATTCCTTACCTCTGGTCCTTAATGATCTG 4829
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 4830 GCTTTTCTGGACAATCCATGGCCTAAAGAAAGGGAAGATTCTTTTCAAACTGGAGCCTGGCTGGAGGCCATGAG 4903
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 4904 ACCGTAGTGGTGACTGATGTGTGCTGGCTCTGGCTGAGGACAGGCTTCTCCAGAACAGGAAGATGGCTGCTTTG 4977
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 4978 GGGACATCTGGATTGGACATCCTTCATGCCCCACTGCCACCAGGCAGTCTCCCCTGATTTCTCACTACCATAGC 5051
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 5052 TGGTCTCCTCCATCTTCATTTATTTGGCCTGTGTGGGCTTTTCTAGCATGTTGTTTGCTCTTCAAACACTCTAG 5125
Query 1789 ------------------------------------------------------------------- 1788
Sbjct 5126 GAATTTCTTAAAGGCTGGTACCTGTGTCCTCATGTAGCAGGTGTGCTCCCTGCTCACAGTAGGTGCT 5192
