Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11738
- Subject:
- XM_006524687.2
- Aligned Length:
- 4232
- Identities:
- 2093
- Gaps:
- 1879
Alignment
Query 1 ATGTCTGCGGAGAGCGGCCCTGGGACGAGATTGAGAAATCTGCCAGTAATGGGGGATGGACTAGAAACTTCCCA 74
||||||.|||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||.|||||
Sbjct 1 ATGTCTACGGAGAGCGGCCCTGGGACAAGATTGAGAAATCTGCCAGTAATGGGGGATGGACTAGAAACCTCCCA 74
Query 75 AATGTCTACAACACAGGCCCAGGCCCAACCCCAGCCAGCCAACGCAGCCAGCACCAACCCCCCGCCCCCAGAGA 148
||||||||||||.||||||||||||||||||||||||||.||.||||||||||||||.||.||.||||||||||
Sbjct 75 AATGTCTACAACGCAGGCCCAGGCCCAACCCCAGCCAGCAAATGCAGCCAGCACCAATCCTCCACCCCCAGAGA 148
Query 149 CCTCCAACCCTAACAAGCCCAAGAGGCAGACCAACCAACTGCAATACCTGCTCAGAGTGGTGCTCAAGACACTA 222
|||||||||||||||||||||||||.|||||.||||||||||||||.|||||||||||||||||||||||||||
Sbjct 149 CCTCCAACCCTAACAAGCCCAAGAGACAGACAAACCAACTGCAATATCTGCTCAGAGTGGTGCTCAAGACACTA 222
Query 223 TGGAAACACCAGTTTGCATGGCCTTTCCAGCAGCCTGTGGATGCCGTCAAGCTGAACCTCCCTGATTACTATAA 296
|||||||||||||||||.|||||||||||||||||.||||||||||||||||||||||||||||||||||||||
Sbjct 223 TGGAAACACCAGTTTGCGTGGCCTTTCCAGCAGCCCGTGGATGCCGTCAAGCTGAACCTCCCTGATTACTATAA 296
Query 297 GATCATTAAAACGCCTATGGATATGGGAACAATAAAGAAGCGCTTGGAAAACAACTATTACTGGAATGCTCAGG 370
|||.||||||||.||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GATTATTAAAACACCCATGGATATGGGAACAATAAAGAAGCGCTTGGAAAACAACTATTACTGGAATGCTCAGG 370
Query 371 AATGTATCCAGGACTTCAACACTATGTTTACAAATTGTTACATCTACAACAAGCCTGGAGATGACATAGTCTTA 444
||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||.||||||
Sbjct 371 AATGTATCCAGGACTTCAACACTATGTTTACAAATTGTTACATCTATAACAAGCCTGGAGATGACATCGTCTTA 444
Query 445 ATGGCAGAAGCTCTGGAAAAGCTCTTCTTGCAAAAAATAAATGAGCTACCCACAGAAGAAACCGAGATCATGAT 518
|||||||||||||||||.||||||||||||||||||||.|||||.||.||.|||||||||||.|||||||||||
Sbjct 445 ATGGCAGAAGCTCTGGAGAAGCTCTTCTTGCAAAAAATCAATGAACTGCCTACAGAAGAAACTGAGATCATGAT 518
Query 519 AGTCCAGGCAAAAGGAAGAGGACGTGGGAGGAAAGAAACAG---GGACAGCAAAACCTGGCGTTTCCACGGTAC 589
||||||||||||||||||||||||.|||||||||||||||| ||.|||||||.|||||.||.||||||||||
Sbjct 519 AGTCCAGGCAAAAGGAAGAGGACGAGGGAGGAAAGAAACAGGTAGGGCAGCAAAGCCTGGTGTATCCACGGTAC 592
Query 590 CAAACACAACTCAAGCATCGACTCCTCCGCAGACCCAGACCCCTCAGCCGAA---TCCTCCTCCTGTGCAGGCC 660
|||||||||||||||||||.|||.||||||||||||||||.|||||||.||| ||||||.||||||||||||
Sbjct 593 CAAACACAACTCAAGCATCAACTTCTCCGCAGACCCAGACGCCTCAGCAGAACCCTCCTCCACCTGTGCAGGCC 666
Query 661 ACGCCTCACCCCTTCCCTGCCGTCACCCCGGACCTCATCGTCCAGACCCCTGTCATGACAGTGGTGCCTCCCCA 734
||..||||||||||.|||||.||||||||.||||||||.|.||||.|.||||||||||||.|||||||.||.||
Sbjct 667 ACAACTCACCCCTTTCCTGCTGTCACCCCAGACCTCATTGCCCAGCCTCCTGTCATGACAATGGTGCCCCCTCA 740
Query 735 GCCACTGCAGACGCCCCCGCCAGTGCCCCCCCAGCCACAACCCCCACCCGCTCCAGCTCCCCAGCCCGTACAGA 808
||||||.|||||.||..|.||.||.|||||||||||||.|||||||||.|||||||.|||.|||||.||.||||
Sbjct 741 GCCACTTCAGACTCCTTCACCGGTACCCCCCCAGCCACCACCCCCACCTGCTCCAGTTCCACAGCCTGTGCAGA 814
Query 809 GCCACCCACCCATCATCGCGGCCACCCCACAGCCTGTGAAGACAAAGAAGGGAGTGAAGAGGAAAGCAGACACC 882
|.|||||.||||||||.|||.|||||||.||||||||||||||||||||.||.|||||||||||||||||.|||
Sbjct 815 GTCACCCGCCCATCATTGCGACCACCCCCCAGCCTGTGAAGACAAAGAAAGGGGTGAAGAGGAAAGCAGATACC 888
Query 883 ACCACCCCCACCACCATTGACCCCATTCACGAGCCACCCTCGCTGCCCCCGGAGCCCAAGACCACCAAGCTGGG 956
||||||||.||||||||.|||||||||||.|||||||||||.|||.||||.||||||||||||.||||||||||
Sbjct 889 ACCACCCCTACCACCATCGACCCCATTCATGAGCCACCCTCACTGGCCCCAGAGCCCAAGACCGCCAAGCTGGG 962
Query 957 CCAGCGGCGGGAGAGCAGCCGGCCTGTGAAACCTCCAAAGAAGGACGTGCCCGACTCTCAGCAGCACCCAGCAC 1030
.|..|||||||||||||||.|.||||||||.||||||||||||||.||.||.|||||.|||||||||||||..|
Sbjct 963 TCCTCGGCGGGAGAGCAGCAGACCTGTGAAGCCTCCAAAGAAGGATGTACCGGACTCACAGCAGCACCCAGGGC 1036
Query 1031 CAGAGAAGAGCAGCAAGGTCTCGGAGCAGCTCAAGTGCTGCAGCGGCATCCTCAAGGAGATGTTTGCCAAGAAG 1104
|||||||||||||||||.||||.||||||||.|||||||||||.|||||||||||||||||||||||||||||.
Sbjct 1037 CAGAGAAGAGCAGCAAGATCTCTGAGCAGCTAAAGTGCTGCAGTGGCATCCTCAAGGAGATGTTTGCCAAGAAA 1110
Query 1105 CACGCCGCCTACGCCTGGCCCTTCTACAAGCCTGTGGACGTGGAGGCACTGGGCCTACACGACTACTGTGACAT 1178
||.||.|||||.||||||||.|||||||||||||||||.||||||||||||||.||.|||||||||||||||||
Sbjct 1111 CATGCTGCCTATGCCTGGCCTTTCTACAAGCCTGTGGATGTGGAGGCACTGGGTCTGCACGACTACTGTGACAT 1184
Query 1179 CATCAAGCACCCCATGGACATGAGCACAATCAAGTCTAAACTGGAGGCCCGTGAGTACCGTGATGCTCAGGAGT 1252
||||||.||.||||||||||||||||||||||||||||||||.|||.||||.||||||.|.|||||.|||||.|
Sbjct 1185 CATCAAACATCCCATGGACATGAGCACAATCAAGTCTAAACTAGAGTCCCGAGAGTACAGAGATGCCCAGGAAT 1258
Query 1253 TTGGTGCTGACGTCCGATTGATGTTCTCCAACTGCTATAAGTACAACCCTCCTGACCATGAGGTGGTGGCCATG 1326
||||||||||.||||||||||||||||||||||||||.|||||||||||.|||||||||||.|||||.||||||
Sbjct 1259 TTGGTGCTGATGTCCGATTGATGTTCTCCAACTGCTACAAGTACAACCCCCCTGACCATGAAGTGGTAGCCATG 1332
Query 1327 GCCCGCAAGCTCCAGGATGTGTTCGAAATGCGCTTTGCCAAGATGCCGGACGAGCCTGAGGAGCCAGTGGTGGC 1400
||.||.||.||||||||||||||.|||||||||||||||||||||||.||.||||||||.||||||||.||..|
Sbjct 1333 GCTCGAAAACTCCAGGATGTGTTTGAAATGCGCTTTGCCAAGATGCCTGATGAGCCTGAAGAGCCAGTTGTTAC 1406
Query 1401 CGTGTCCTCCCCGGCAGTGCCCCCTCCCACCAAGGTTGTGGCCCCGCCCTCATCCAGCGACAGCAGCAGCGATA 1474
.||||||||.||.||||||||.||.||.||.|||||.||.|||||.||||||||.||.||||||||||||||.|
Sbjct 1407 AGTGTCCTCTCCTGCAGTGCCACCCCCTACAAAGGTGGTAGCCCCACCCTCATCTAGTGACAGCAGCAGCGACA 1480
Query 1475 GCTCCTCGGACAGTGACAGTTCGACTGATGACTCTGAGGAGGAGCGAGCCCAGCGGCTGGCTGAGCTCCAGGAG 1548
|.||.||.|||||.||||||||.|||||.|||||||||||.|||||||||||||||||||||||.||||||||.
Sbjct 1481 GTTCTTCCGACAGCGACAGTTCCACTGACGACTCTGAGGAAGAGCGAGCCCAGCGGCTGGCTGAACTCCAGGAA 1554
Query 1549 CAGCTCAAAGCCGTGCACGAGCAGCTTGCAGCCCTCTCTCAGCCCCAGCAGAACAAACCAAAGAAAAAGGAGAA 1622
||||||||.||||||||.||||||||||||||||||||.|||||||||||||||||||||||||||||||||||
Sbjct 1555 CAGCTCAAGGCCGTGCATGAGCAGCTTGCAGCCCTCTCACAGCCCCAGCAGAACAAACCAAAGAAAAAGGAGAA 1628
Query 1623 AGACAAGAAGGAAAAGAAAAAAGAAAAGCACAAAAGGAAAGAGGAAGTGGAAGAGAATAAAAAAAGCAAAGCCA 1696
.||||||||||||||||||||.|||||||||||||.||||||.||||||||.||.|||||||||||||||.|||
Sbjct 1629 GGACAAGAAGGAAAAGAAAAAGGAAAAGCACAAAAAGAAAGAAGAAGTGGAGGAAAATAAAAAAAGCAAAACCA 1702
Query 1697 AGGAACCTCCTCCTAAAAAGACGAAGAAAAATAATAGCAGCAACAGCAATGTGAGCAAGAAGGAGCCAGCGCCC 1770
||||||.||||||.||||||||.|||||||||||.|||||||||||||||||||||||||||||.||||..|||
Sbjct 1703 AGGAACTTCCTCCCAAAAAGACAAAGAAAAATAACAGCAGCAACAGCAATGTGAGCAAGAAGGAACCAGTACCC 1776
Query 1771 ATGAAGAGCAAGCCCCCTCCCACGTATGAGTCGGAGGAAGAGGACAAGTGCAAGCCTATGTCCTATGAGGAGAA 1844
|.|||||.||||||.||||||||.|||||.||.||.||.|||||.|||||.|||||.|||||.|||||||||||
Sbjct 1777 ACGAAGACCAAGCCGCCTCCCACATATGAATCAGAAGAGGAGGATAAGTGTAAGCCCATGTCTTATGAGGAGAA 1850
Query 1845 GCGGCAGCTCAGCTTGGACATCAACAAGCTCCCCGGCGAGAAGCTGGGCCGCGTGGTGCACATCATCCAGTCAC 1918
|||||||||.||..|.||.||||||||.||.||.||.||||||||.|||||.||.||.|||||.||.||||||.
Sbjct 1851 GCGGCAGCTAAGTCTAGATATCAACAAACTTCCTGGTGAGAAGCTAGGCCGTGTAGTACACATAATTCAGTCAA 1924
Query 1919 GGGAGCCCTCCCTGAAGAATTCCAACCCCGACGAGATTGAAATCGACTTTGAGACCCTGAAGCCGTCCACACTG 1992
||||.||.||.||.||.||.|||||||||||.||||||||.||.||||||||||||||||||||.||.|||||.
Sbjct 1925 GGGAACCATCACTTAAAAACTCCAACCCCGATGAGATTGAGATTGACTTTGAGACCCTGAAGCCATCTACACTA 1998
Query 1993 CGTGAGCTGGAGCGCTATGTCACCTCCTGTTTGCGGAAGAAAAGGAAACCTCAAGCTGAGAAAGTTGATGTGAT 2066
||.|||.|||||||.||||||||||||||||||||||||||||||||||||||||||||.||||||||.|||||
Sbjct 1999 CGAGAGTTGGAGCGATATGTCACCTCCTGTTTGCGGAAGAAAAGGAAACCTCAAGCTGAAAAAGTTGACGTGAT 2072
Query 2067 TGCCGGCTCCTCCAAGATGAAGGGCTTCTCGTCCTCAGAGTCGGAGAGCTCCAGTGAGTCCAGCTCCTCTGACA 2140
|||.||.||.||||||||||||||.|||||.|||||.||||||||||||.||||.||.||||||||||||||||
Sbjct 2073 TGCTGGTTCTTCCAAGATGAAGGGATTCTCATCCTCTGAGTCGGAGAGCACCAGCGAATCCAGCTCCTCTGACA 2146
Query 2141 GCGAAGACTCCGAAACA------GCT----------------------------------------------TT 2162
|.||||||||.|||||| ||| .|
Sbjct 2147 GTGAAGACTCTGAAACAGAGATGGCTCCCAAGTCAAAAAAGAAGGGGCACACTGGGAGGGACCAGAAAAAGCAT 2220
Query 2163 CTGCACCA-------------GTGGAG--------ACTTCGTGT-CCCCAG----------------------G 2192
|..||||| .||.|| |..||.||| |||||| .
Sbjct 2221 CATCACCATCACCATCCACAGATGCAGCCAGCCCCAGCTCCTGTGCCCCAGCAGCCGCCCCCACCTCCACAGCA 2294
Query 2193 GCCT--TCC----------CCGTATCA-CAGTCACGTGCAG--------------------TGCGGCC-----G 2228
|||| ||| |||.|.|| ||| || |||| |.||.|| |
Sbjct 2295 GCCTCCTCCACCCCCACCTCCGCAGCAGCAG-CA---GCAGCAACCTCCACCCCCACCACCTCCGCCCTCCATG 2364
Query 2229 CTTCAG-----------GGAGATG-------------------------CTTCGCTGGT-----TTCTGGTGGA 2261
|..||| .|.|||| ||.|.|.||| |.||||
Sbjct 2365 CCACAGCAGACTGCCCCAGCGATGAAGTCCTCGCCCCCACCCTTCATCACTGCCCAGGTCCCCGTCCTGG---- 2434
Query 2262 TGTGGAGCAGACTGCAGCTGGCCA----------------------GCCGCATC-----GCCAGTCT------- 2301
.||..||||| |||| |||.|.|| |||..|||
Sbjct 2435 ---------AACCACAGCT-GCCAGGCAGTGTCTTTGACCCTATTGGCCACTTCACCCAGCCCATCTTGCACCT 2498
Query 2302 ---GCTGCTGGCCCTGC--CATCACCTGGGCCCCAGCCATTGCCT---------ACCCCTCCCCAGAGTGTGCT 2361
||.||.||..|||| |.|||||| |||||||||| ||| ||.||.||||| .||
Sbjct 2499 GCCGCAGCCGGAGCTGCCTCCTCACCT--GCCCCAGCCA---CCTGAGCACAGCACTCCACCCCA------TCT 2561
Query 2362 C------GTTGCTGTGTTGGCTGCTCC----------------------------------------------- 2382
| ..|||||||.|..||.||||
Sbjct 2562 CAACCAGCATGCTGTGGTCTCTCCTCCAGCTTTGCACAATGCGCTGCCCCAACAGCCATCTCGGCCCAGTAACC 2635
Query 2383 -------------------------------------------------------------------------- 2382
Sbjct 2636 GAGCTGCTGCTCTGCCCCCAAAGCCTACCCGACCCCCAGCTGTGTCCCCTGCCCTGGCCCAGCCCCCCCTGCTC 2709
Query 2383 -------------------------------------------------------------------------- 2382
Sbjct 2710 CCACAACCACCAATGGCTCAGCCCCCCCAAGTGCTGCTGGAGGATGAAGAGCCACCTGCCCCACCCCTCACCTC 2783
Query 2383 -------------------------------------------------------------------------- 2382
Sbjct 2784 CATGCAGATGCAGTTGTACCTACAGCAGCTGCAGAAGGTGCAGCCTCCCACACCACTACTCCCTTCCGTGAAGG 2857
Query 2383 -------------------------------------------------------------------------- 2382
Sbjct 2858 TGCAGTCCCAACCCCCACCGCCTTTGCCGCCTCCACCCCACCCTTCTGTGCAGCAGCAGCAGCTCCAGCCACAG 2931
Query 2383 -------------------------------------------------------------------------- 2382
Sbjct 2932 CCACCGCCACCCCCACCTCCTCAGCCACAGCCACCACCCCAGCAACAACACCAGCCTCCACCACGACCAGTTCA 3005
Query 2383 -------------------------------------------------------------------------- 2382
Sbjct 3006 CTTGCCATCCATGCCCTTTTCTGCTCATATTCAGCAGCCCCCACCACCCCCAGGACAGCAACCTACTCACCCAC 3079
Query 2383 -------------------------------------------------------------------------- 2382
Sbjct 3080 CCCCAGGACAGCAGCCCCCACCACCACAGCCTGCCAAGCCCCAGCAAGTCATCCAGCATCACCCTTCCCCCCGG 3153
Query 2383 -------------------------------------------------------------------------- 2382
Sbjct 3154 CACCACAAGTCAGACCCCTACTCAGCTGGTCATCTTCGTGAGGCTCCCTCTCCGCTTATGATACATTCCCCTCA 3227
Query 2383 -------------------------------------------------------------------------- 2382
Sbjct 3228 GATGCCACAGTTCCAGAGCCTGACCCATCAGTCTCCTCCCCAGCAAAACGTCCAGCCTAAGAAGCAGGTAAAGG 3301
Query 2383 -------------------------------------------------------------------------- 2382
Sbjct 3302 GCAGGGCTGAGCCACAGCCACCAGGGCCAGTCATGGGCCAAGGCCAGGGATGCCCACCTGCCTCACCGGCTGCC 3375
Query 2383 -------------------------------------------------------------------------- 2382
Sbjct 3376 GTGCCTATGCTGTCCCAGGAGCTGCGACCACCTTCAGTCGTCCAGCCCCAGCCCCTGGTGGTAGTAAAGGAGGA 3449
Query 2383 -------------------------------------------------------------------------- 2382
Sbjct 3450 GAAGATTCACTCACCAATCATTCGCAGCGAGCCTTTCAGCACCTCACTTCGACCAGAGCCCCCCAAGCACCCAG 3523
Query 2383 -------------------------------------------------------------------------- 2382
Sbjct 3524 AGAACATCAAGGCCCCAGTCCACCTGCCCCAGCGGCCTGAGATGAAGCCTGTAGACATAGGGAGGCCTGTGATC 3597
Query 2383 -------------------------------------------------------------------------- 2382
Sbjct 3598 CGGCCTCCAGAGCAGAGTGCACCCCCACCAGGGGCCCCTGACAAGGACAAACAGAAGCAGGAGCCAAAAACACC 3671
Query 2383 -------------------------------------------------------------------------- 2382
Sbjct 3672 AGTGGCACCCAAAAAGGACCTGAAAATTAAGAACATGGGCTCCTGGGCCAGCCTGGTACAGAAGCATCCGACCA 3745
Query 2383 -------------------------------------------------------------------------- 2382
Sbjct 3746 CCCCATCCTCCACAGCCAAGTCCTCAAGTGACAGCTTTGAGCATTTCCGCCGTGCTGCTCGGGAGAAGGAGGAG 3819
Query 2383 -------------------------------------------------------------------------- 2382
Sbjct 3820 AGGGAAAAGGCCCTGAAGGCTCAGGCTGAGCATGCAGAGAAGGAGAAGGAGCGGCTGAGGCAGGAGCGCATGAG 3893
Query 2383 -------------------------------------------------------------------------- 2382
Sbjct 3894 GAGCCGAGAGGATGAAGATGCGCTGGAACAGGCACGTCGAGCCCATGAGGAGGCACGACGGCGCCAGGAGCAGC 3967
Query 2383 -------------------------------------------------------------------------- 2382
Sbjct 3968 AGCAGCAGCAGCAGCAGCAGAGACAGGAGCAGCAGCAGCAGCAGCAGCAGGCAGCTGCTGTGGCCGCTGCCTCT 4041
Query 2383 -------------------------------------------------------------------------- 2382
Sbjct 4042 GCCCCCCAGGCCCAGAGCTCCCAGCCCCAGTCTATGCTGGACCAGCAGAGGGAGTTGGCCCGGAAACGAGAGCA 4115
Query 2383 -------------------------------------------------------------------------- 2382
Sbjct 4116 GGAGCGGAGGCGCAGGGAGGCAATGGCAGCTACAATTGACATGAATTTCCAGAGTGATCTTTTGTCAATATTTG 4189
Query 2383 -------------- 2382
Sbjct 4190 AAGAAAATCTTTTT 4203
