Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11738
- Subject:
- XM_006524693.2
- Aligned Length:
- 4229
- Identities:
- 1668
- Gaps:
- 2320
Alignment
Query 1 ATGTCTGCGGAGAGCGGCCCTGGGACGAGATTGAGAAATCTGCCAGTAATGGGGGATGGACTAGAAACTTCCCA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 AATGTCTACAACACAGGCCCAGGCCCAACCCCAGCCAGCCAACGCAGCCAGCACCAACCCCCCGCCCCCAGAGA 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 CCTCCAACCCTAACAAGCCCAAGAGGCAGACCAACCAACTGCAATACCTGCTCAGAGTGGTGCTCAAGACACTA 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 TGGAAACACCAGTTTGCATGGCCTTTCCAGCAGCCTGTGGATGCCGTCAAGCTGAACCTCCCTGATTACTATAA 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 GATCATTAAAACGCCTATGGATATGGGAACAATAAAGAAGCGCTTGGAAAACAACTATTACTGGAATGCTCAGG 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 AATGTATCCAGGACTTCAACACTATGTTTACAAATTGTTACATCTACAACAAGCCTGGAGATGACATAGTCTTA 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 ATGGCAGAAGCTCTGGAAAAGCTCTTCTTGCAAAAAATAAATGAGCTACCCACAGAAGAAACCGAGATCATGAT 518
|||||||||||||||||.||||||||||||||||||||.|||||.||.||.|||||||||||.|||||||||||
Sbjct 1 ATGGCAGAAGCTCTGGAGAAGCTCTTCTTGCAAAAAATCAATGAACTGCCTACAGAAGAAACTGAGATCATGAT 74
Query 519 AGTCCAGGCAAAAGGAAGAGGACGTGGGAGGAAAGAAACAGGGACAGCAAAACCTGGCGTTTCCACGGTACCAA 592
||||||||||||||||||||||||.||||||||||||||||||.|||||||.|||||.||.|||||||||||||
Sbjct 75 AGTCCAGGCAAAAGGAAGAGGACGAGGGAGGAAAGAAACAGGGGCAGCAAAGCCTGGTGTATCCACGGTACCAA 148
Query 593 ACACAACTCAAGCATCGACTCCTCCGCAGACCCAGACCCCTCAGCCGAA---TCCTCCTCCTGTGCAGGCCACG 663
||||||||||||||||.|||.||||||||||||||||.|||||||.||| ||||||.||||||||||||||.
Sbjct 149 ACACAACTCAAGCATCAACTTCTCCGCAGACCCAGACGCCTCAGCAGAACCCTCCTCCACCTGTGCAGGCCACA 222
Query 664 CCTCACCCCTTCCCTGCCGTCACCCCGGACCTCATCGTCCAGACCCCTGTCATGACAGTGGTGCCTCCCCAGCC 737
.||||||||||.|||||.||||||||.||||||||.|.||||.|.||||||||||||.|||||||.||.|||||
Sbjct 223 ACTCACCCCTTTCCTGCTGTCACCCCAGACCTCATTGCCCAGCCTCCTGTCATGACAATGGTGCCCCCTCAGCC 296
Query 738 ACTGCAGACGCCCCCGCCAGTGCCCCCCCAGCCACAACCCCCACCCGCTCCAGCTCCCCAGCCCGTACAGAGCC 811
|||.|||||.||..|.||.||.|||||||||||||.|||||||||.|||||||.|||.|||||.||.|||||.|
Sbjct 297 ACTTCAGACTCCTTCACCGGTACCCCCCCAGCCACCACCCCCACCTGCTCCAGTTCCACAGCCTGTGCAGAGTC 370
Query 812 ACCCACCCATCATCGCGGCCACCCCACAGCCTGTGAAGACAAAGAAGGGAGTGAAGAGGAAAGCAGACACCACC 885
||||.||||||||.|||.|||||||.||||||||||||||||||||.||.|||||||||||||||||.||||||
Sbjct 371 ACCCGCCCATCATTGCGACCACCCCCCAGCCTGTGAAGACAAAGAAAGGGGTGAAGAGGAAAGCAGATACCACC 444
Query 886 ACCCCCACCACCATTGACCCCATTCACGAGCCACCCTCGCTGCCCCCGGAGCCCAAGACCACCAAGCTGGGCCA 959
|||||.||||||||.|||||||||||.|||||||||||.|||.||||.||||||||||||.||||||||||.|.
Sbjct 445 ACCCCTACCACCATCGACCCCATTCATGAGCCACCCTCACTGGCCCCAGAGCCCAAGACCGCCAAGCTGGGTCC 518
Query 960 GCGGCGGGAGAGCAGCCGGCCTGTGAAACCTCCAAAGAAGGACGTGCCCGACTCTCAGCAGCACCCAGCACCAG 1033
.|||||||||||||||.|.||||||||.||||||||||||||.||.||.|||||.|||||||||||||..||||
Sbjct 519 TCGGCGGGAGAGCAGCAGACCTGTGAAGCCTCCAAAGAAGGATGTACCGGACTCACAGCAGCACCCAGGGCCAG 592
Query 1034 AGAAGAGCAGCAAGGTCTCGGAGCAGCTCAAGTGCTGCAGCGGCATCCTCAAGGAGATGTTTGCCAAGAAGCAC 1107
||||||||||||||.||||.||||||||.|||||||||||.|||||||||||||||||||||||||||||.||.
Sbjct 593 AGAAGAGCAGCAAGATCTCTGAGCAGCTAAAGTGCTGCAGTGGCATCCTCAAGGAGATGTTTGCCAAGAAACAT 666
Query 1108 GCCGCCTACGCCTGGCCCTTCTACAAGCCTGTGGACGTGGAGGCACTGGGCCTACACGACTACTGTGACATCAT 1181
||.|||||.||||||||.|||||||||||||||||.||||||||||||||.||.||||||||||||||||||||
Sbjct 667 GCTGCCTATGCCTGGCCTTTCTACAAGCCTGTGGATGTGGAGGCACTGGGTCTGCACGACTACTGTGACATCAT 740
Query 1182 CAAGCACCCCATGGACATGAGCACAATCAAGTCTAAACTGGAGGCCCGTGAGTACCGTGATGCTCAGGAGTTTG 1255
|||.||.||||||||||||||||||||||||||||||||.|||.||||.||||||.|.|||||.|||||.||||
Sbjct 741 CAAACATCCCATGGACATGAGCACAATCAAGTCTAAACTAGAGTCCCGAGAGTACAGAGATGCCCAGGAATTTG 814
Query 1256 GTGCTGACGTCCGATTGATGTTCTCCAACTGCTATAAGTACAACCCTCCTGACCATGAGGTGGTGGCCATGGCC 1329
|||||||.||||||||||||||||||||||||||.|||||||||||.|||||||||||.|||||.||||||||.
Sbjct 815 GTGCTGATGTCCGATTGATGTTCTCCAACTGCTACAAGTACAACCCCCCTGACCATGAAGTGGTAGCCATGGCT 888
Query 1330 CGCAAGCTCCAGGATGTGTTCGAAATGCGCTTTGCCAAGATGCCGGACGAGCCTGAGGAGCCAGTGGTGGCCGT 1403
||.||.||||||||||||||.|||||||||||||||||||||||.||.||||||||.||||||||.||..|.||
Sbjct 889 CGAAAACTCCAGGATGTGTTTGAAATGCGCTTTGCCAAGATGCCTGATGAGCCTGAAGAGCCAGTTGTTACAGT 962
Query 1404 GTCCTCCCCGGCAGTGCCCCCTCCCACCAAGGTTGTGGCCCCGCCCTCATCCAGCGACAGCAGCAGCGATAGCT 1477
||||||.||.||||||||.||.||.||.|||||.||.|||||.||||||||.||.||||||||||||||.||.|
Sbjct 963 GTCCTCTCCTGCAGTGCCACCCCCTACAAAGGTGGTAGCCCCACCCTCATCTAGTGACAGCAGCAGCGACAGTT 1036
Query 1478 CCTCGGACAGTGACAGTTCGACTGATGACTCTGAGGAGGAGCGAGCCCAGCGGCTGGCTGAGCTCCAGGAGCAG 1551
|.||.|||||.||||||||.|||||.|||||||||||.|||||||||||||||||||||||.||||||||.|||
Sbjct 1037 CTTCCGACAGCGACAGTTCCACTGACGACTCTGAGGAAGAGCGAGCCCAGCGGCTGGCTGAACTCCAGGAACAG 1110
Query 1552 CTCAAAGCCGTGCACGAGCAGCTTGCAGCCCTCTCTCAGCCCCAGCAGAACAAACCAAAGAAAAAGGAGAAAGA 1625
|||||.||||||||.||||||||||||||||||||.|||||||||||||||||||||||||||||||||||.||
Sbjct 1111 CTCAAGGCCGTGCATGAGCAGCTTGCAGCCCTCTCACAGCCCCAGCAGAACAAACCAAAGAAAAAGGAGAAGGA 1184
Query 1626 CAAGAAGGAAAAGAAAAAAGAAAAGCACAAAAGGAAAGAGGAAGTGGAAGAGAATAAAAAAAGCAAAGCCAAGG 1699
||||||||||||||||||.|||||||||||||.||||||.||||||||.||.|||||||||||||||.||||||
Sbjct 1185 CAAGAAGGAAAAGAAAAAGGAAAAGCACAAAAAGAAAGAAGAAGTGGAGGAAAATAAAAAAAGCAAAACCAAGG 1258
Query 1700 AACCTCCTCCTAAAAAGACGAAGAAAAATAATAGCAGCAACAGCAATGTGAGCAAGAAGGAGCCAGCGCCCATG 1773
|||.||||||.||||||||.|||||||||||.|||||||||||||||||||||||||||||.||||..||||.|
Sbjct 1259 AACTTCCTCCCAAAAAGACAAAGAAAAATAACAGCAGCAACAGCAATGTGAGCAAGAAGGAACCAGTACCCACG 1332
Query 1774 AAGAGCAAGCCCCCTCCCACGTATGAGTCGGAGGAAGAGGACAAGTGCAAGCCTATGTCCTATGAGGAGAAGCG 1847
||||.||||||.||||||||.|||||.||.||.||.|||||.|||||.|||||.|||||.||||||||||||||
Sbjct 1333 AAGACCAAGCCGCCTCCCACATATGAATCAGAAGAGGAGGATAAGTGTAAGCCCATGTCTTATGAGGAGAAGCG 1406
Query 1848 GCAGCTCAGCTTGGACATCAACAAGCTCCCCGGCGAGAAGCTGGGCCGCGTGGTGCACATCATCCAGTCACGGG 1921
||||||.||..|.||.||||||||.||.||.||.||||||||.|||||.||.||.|||||.||.||||||.|||
Sbjct 1407 GCAGCTAAGTCTAGATATCAACAAACTTCCTGGTGAGAAGCTAGGCCGTGTAGTACACATAATTCAGTCAAGGG 1480
Query 1922 AGCCCTCCCTGAAGAATTCCAACCCCGACGAGATTGAAATCGACTTTGAGACCCTGAAGCCGTCCACACTGCGT 1995
|.||.||.||.||.||.|||||||||||.||||||||.||.||||||||||||||||||||.||.|||||.||.
Sbjct 1481 AACCATCACTTAAAAACTCCAACCCCGATGAGATTGAGATTGACTTTGAGACCCTGAAGCCATCTACACTACGA 1554
Query 1996 GAGCTGGAGCGCTATGTCACCTCCTGTTTGCGGAAGAAAAGGAAACCTCAAGCTGAGAAAGTTGATGTGATTGC 2069
|||.|||||||.||||||||||||||||||||||||||||||||||||||||||||.||||||||.||||||||
Sbjct 1555 GAGTTGGAGCGATATGTCACCTCCTGTTTGCGGAAGAAAAGGAAACCTCAAGCTGAAAAAGTTGACGTGATTGC 1628
Query 2070 CGGCTCCTCCAAGATGAAGGGCTTCTCGTCCTCAGAGTCGGAGAGCTCCAGTGAGTCCAGCTCCTCTGACAGCG 2143
.||.||.||||||||||||||.|||||.|||||.||||||||||||.||||.||.|||||||||||||||||.|
Sbjct 1629 TGGTTCTTCCAAGATGAAGGGATTCTCATCCTCTGAGTCGGAGAGCACCAGCGAATCCAGCTCCTCTGACAGTG 1702
Query 2144 AAGACTCCGAAACA------GCT----------------------------------------------TTCTG 2165
|||||||.|||||| ||| .||..
Sbjct 1703 AAGACTCTGAAACAGAGATGGCTCCCAAGTCAAAAAAGAAGGGGCACACTGGGAGGGACCAGAAAAAGCATCAT 1776
Query 2166 CACCA-------------GTGGAG--------ACTTCGTGT-CCCCAG----------------------GGCC 2195
||||| .||.|| |..||.||| |||||| .|||
Sbjct 1777 CACCATCACCATCCACAGATGCAGCCAGCCCCAGCTCCTGTGCCCCAGCAGCCGCCCCCACCTCCACAGCAGCC 1850
Query 2196 T--TCC----------CCGTATCA-CAGTCACGTGCAG--------------------TGCGGCC-----GCTT 2231
| ||| |||.|.|| ||| || |||| |.||.|| ||..
Sbjct 1851 TCCTCCACCCCCACCTCCGCAGCAGCAG-CA---GCAGCAACCTCCACCCCCACCACCTCCGCCCTCCATGCCA 1920
Query 2232 CAG-----------GGAGATG-------------------------CTTCGCTGGT-----TTCTGGTGGATGT 2264
||| .|.|||| ||.|.|.||| |.||||
Sbjct 1921 CAGCAGACTGCCCCAGCGATGAAGTCCTCGCCCCCACCCTTCATCACTGCCCAGGTCCCCGTCCTGG------- 1987
Query 2265 GGAGCAGACTGCAGCTGGCCA----------------------GCCGCATC-----GCCAGTCT---------- 2301
.||..||||| |||| |||.|.|| |||..|||
Sbjct 1988 ------AACCACAGCT-GCCAGGCAGTGTCTTTGACCCTATTGGCCACTTCACCCAGCCCATCTTGCACCTGCC 2054
Query 2302 GCTGCTGGCCCTGC--CATCACCTGGGCCCCAGCCATTGCCT---------ACCCCTCCCCAGAGTGTGCTC-- 2362
||.||.||..|||| |.|||||| |||||||||| ||| ||.||.||||| .|||
Sbjct 2055 GCAGCCGGAGCTGCCTCCTCACCT--GCCCCAGCCA---CCTGAGCACAGCACTCCACCCCA------TCTCAA 2117
Query 2363 ----GTTGCTGTGTTGGCTGCTCC-------------------------------------------------- 2382
..|||||||.|..||.||||
Sbjct 2118 CCAGCATGCTGTGGTCTCTCCTCCAGCTTTGCACAATGCGCTGCCCCAACAGCCATCTCGGCCCAGTAACCGAG 2191
Query 2383 -------------------------------------------------------------------------- 2382
Sbjct 2192 CTGCTGCTCTGCCCCCAAAGCCTACCCGACCCCCAGCTGTGTCCCCTGCCCTGGCCCAGCCCCCCCTGCTCCCA 2265
Query 2383 -------------------------------------------------------------------------- 2382
Sbjct 2266 CAACCACCAATGGCTCAGCCCCCCCAAGTGCTGCTGGAGGATGAAGAGCCACCTGCCCCACCCCTCACCTCCAT 2339
Query 2383 -------------------------------------------------------------------------- 2382
Sbjct 2340 GCAGATGCAGTTGTACCTACAGCAGCTGCAGAAGGTGCAGCCTCCCACACCACTACTCCCTTCCGTGAAGGTGC 2413
Query 2383 -------------------------------------------------------------------------- 2382
Sbjct 2414 AGTCCCAACCCCCACCGCCTTTGCCGCCTCCACCCCACCCTTCTGTGCAGCAGCAGCAGCTCCAGCCACAGCCA 2487
Query 2383 -------------------------------------------------------------------------- 2382
Sbjct 2488 CCGCCACCCCCACCTCCTCAGCCACAGCCACCACCCCAGCAACAACACCAGCCTCCACCACGACCAGTTCACTT 2561
Query 2383 -------------------------------------------------------------------------- 2382
Sbjct 2562 GCCATCCATGCCCTTTTCTGCTCATATTCAGCAGCCCCCACCACCCCCAGGACAGCAACCTACTCACCCACCCC 2635
Query 2383 -------------------------------------------------------------------------- 2382
Sbjct 2636 CAGGACAGCAGCCCCCACCACCACAGCCTGCCAAGCCCCAGCAAGTCATCCAGCATCACCCTTCCCCCCGGCAC 2709
Query 2383 -------------------------------------------------------------------------- 2382
Sbjct 2710 CACAAGTCAGACCCCTACTCAGCTGGTCATCTTCGTGAGGCTCCCTCTCCGCTTATGATACATTCCCCTCAGAT 2783
Query 2383 -------------------------------------------------------------------------- 2382
Sbjct 2784 GCCACAGTTCCAGAGCCTGACCCATCAGTCTCCTCCCCAGCAAAACGTCCAGCCTAAGAAGCAGGTAAAGGGCA 2857
Query 2383 -------------------------------------------------------------------------- 2382
Sbjct 2858 GGGCTGAGCCACAGCCACCAGGGCCAGTCATGGGCCAAGGCCAGGGATGCCCACCTGCCTCACCGGCTGCCGTG 2931
Query 2383 -------------------------------------------------------------------------- 2382
Sbjct 2932 CCTATGCTGTCCCAGGAGCTGCGACCACCTTCAGTCGTCCAGCCCCAGCCCCTGGTGGTAGTAAAGGAGGAGAA 3005
Query 2383 -------------------------------------------------------------------------- 2382
Sbjct 3006 GATTCACTCACCAATCATTCGCAGCGAGCCTTTCAGCACCTCACTTCGACCAGAGCCCCCCAAGCACCCAGAGA 3079
Query 2383 -------------------------------------------------------------------------- 2382
Sbjct 3080 ACATCAAGGCCCCAGTCCACCTGCCCCAGCGGCCTGAGATGAAGCCTGTAGACATAGGGAGGCCTGTGATCCGG 3153
Query 2383 -------------------------------------------------------------------------- 2382
Sbjct 3154 CCTCCAGAGCAGAGTGCACCCCCACCAGGGGCCCCTGACAAGGACAAACAGAAGCAGGAGCCAAAAACACCAGT 3227
Query 2383 -------------------------------------------------------------------------- 2382
Sbjct 3228 GGCACCCAAAAAGGACCTGAAAATTAAGAACATGGGCTCCTGGGCCAGCCTGGTACAGAAGCATCCGACCACCC 3301
Query 2383 -------------------------------------------------------------------------- 2382
Sbjct 3302 CATCCTCCACAGCCAAGTCCTCAAGTGACAGCTTTGAGCATTTCCGCCGTGCTGCTCGGGAGAAGGAGGAGAGG 3375
Query 2383 -------------------------------------------------------------------------- 2382
Sbjct 3376 GAAAAGGCCCTGAAGGCTCAGGCTGAGCATGCAGAGAAGGAGAAGGAGCGGCTGAGGCAGGAGCGCATGAGGAG 3449
Query 2383 -------------------------------------------------------------------------- 2382
Sbjct 3450 CCGAGAGGATGAAGATGCGCTGGAACAGGCACGTCGAGCCCATGAGGAGGCACGACGGCGCCAGGAGCAGCAGC 3523
Query 2383 -------------------------------------------------------------------------- 2382
Sbjct 3524 AGCAGCAGCAGCAGCAGAGACAGGAGCAGCAGCAGCAGCAGCAGCAGGCAGCTGCTGTGGCCGCTGCCTCTGCC 3597
Query 2383 -------------------------------------------------------------------------- 2382
Sbjct 3598 CCCCAGGCCCAGAGCTCCCAGCCCCAGTCTATGCTGGACCAGCAGAGGGAGTTGGCCCGGAAACGAGAGCAGGA 3671
Query 2383 -------------------------------------------------------------------------- 2382
Sbjct 3672 GCGGAGGCGCAGGGAGGCAATGGCAGCTACAATTGACATGAATTTCCAGAGTGATCTTTTGTCAATATTTGAAG 3745
Query 2383 ----------- 2382
Sbjct 3746 AAAATCTTTTT 3756
