Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_11738
Subject:
XM_006524693.2
Aligned Length:
4229
Identities:
1668
Gaps:
2320

Alignment

Query    1  ATGTCTGCGGAGAGCGGCCCTGGGACGAGATTGAGAAATCTGCCAGTAATGGGGGATGGACTAGAAACTTCCCA  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  AATGTCTACAACACAGGCCCAGGCCCAACCCCAGCCAGCCAACGCAGCCAGCACCAACCCCCCGCCCCCAGAGA  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  CCTCCAACCCTAACAAGCCCAAGAGGCAGACCAACCAACTGCAATACCTGCTCAGAGTGGTGCTCAAGACACTA  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  TGGAAACACCAGTTTGCATGGCCTTTCCAGCAGCCTGTGGATGCCGTCAAGCTGAACCTCCCTGATTACTATAA  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  GATCATTAAAACGCCTATGGATATGGGAACAATAAAGAAGCGCTTGGAAAACAACTATTACTGGAATGCTCAGG  370
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  371  AATGTATCCAGGACTTCAACACTATGTTTACAAATTGTTACATCTACAACAAGCCTGGAGATGACATAGTCTTA  444
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  445  ATGGCAGAAGCTCTGGAAAAGCTCTTCTTGCAAAAAATAAATGAGCTACCCACAGAAGAAACCGAGATCATGAT  518
            |||||||||||||||||.||||||||||||||||||||.|||||.||.||.|||||||||||.|||||||||||
Sbjct    1  ATGGCAGAAGCTCTGGAGAAGCTCTTCTTGCAAAAAATCAATGAACTGCCTACAGAAGAAACTGAGATCATGAT  74

Query  519  AGTCCAGGCAAAAGGAAGAGGACGTGGGAGGAAAGAAACAGGGACAGCAAAACCTGGCGTTTCCACGGTACCAA  592
            ||||||||||||||||||||||||.||||||||||||||||||.|||||||.|||||.||.|||||||||||||
Sbjct   75  AGTCCAGGCAAAAGGAAGAGGACGAGGGAGGAAAGAAACAGGGGCAGCAAAGCCTGGTGTATCCACGGTACCAA  148

Query  593  ACACAACTCAAGCATCGACTCCTCCGCAGACCCAGACCCCTCAGCCGAA---TCCTCCTCCTGTGCAGGCCACG  663
            ||||||||||||||||.|||.||||||||||||||||.|||||||.|||   ||||||.||||||||||||||.
Sbjct  149  ACACAACTCAAGCATCAACTTCTCCGCAGACCCAGACGCCTCAGCAGAACCCTCCTCCACCTGTGCAGGCCACA  222

Query  664  CCTCACCCCTTCCCTGCCGTCACCCCGGACCTCATCGTCCAGACCCCTGTCATGACAGTGGTGCCTCCCCAGCC  737
            .||||||||||.|||||.||||||||.||||||||.|.||||.|.||||||||||||.|||||||.||.|||||
Sbjct  223  ACTCACCCCTTTCCTGCTGTCACCCCAGACCTCATTGCCCAGCCTCCTGTCATGACAATGGTGCCCCCTCAGCC  296

Query  738  ACTGCAGACGCCCCCGCCAGTGCCCCCCCAGCCACAACCCCCACCCGCTCCAGCTCCCCAGCCCGTACAGAGCC  811
            |||.|||||.||..|.||.||.|||||||||||||.|||||||||.|||||||.|||.|||||.||.|||||.|
Sbjct  297  ACTTCAGACTCCTTCACCGGTACCCCCCCAGCCACCACCCCCACCTGCTCCAGTTCCACAGCCTGTGCAGAGTC  370

Query  812  ACCCACCCATCATCGCGGCCACCCCACAGCCTGTGAAGACAAAGAAGGGAGTGAAGAGGAAAGCAGACACCACC  885
            ||||.||||||||.|||.|||||||.||||||||||||||||||||.||.|||||||||||||||||.||||||
Sbjct  371  ACCCGCCCATCATTGCGACCACCCCCCAGCCTGTGAAGACAAAGAAAGGGGTGAAGAGGAAAGCAGATACCACC  444

Query  886  ACCCCCACCACCATTGACCCCATTCACGAGCCACCCTCGCTGCCCCCGGAGCCCAAGACCACCAAGCTGGGCCA  959
            |||||.||||||||.|||||||||||.|||||||||||.|||.||||.||||||||||||.||||||||||.|.
Sbjct  445  ACCCCTACCACCATCGACCCCATTCATGAGCCACCCTCACTGGCCCCAGAGCCCAAGACCGCCAAGCTGGGTCC  518

Query  960  GCGGCGGGAGAGCAGCCGGCCTGTGAAACCTCCAAAGAAGGACGTGCCCGACTCTCAGCAGCACCCAGCACCAG  1033
            .|||||||||||||||.|.||||||||.||||||||||||||.||.||.|||||.|||||||||||||..||||
Sbjct  519  TCGGCGGGAGAGCAGCAGACCTGTGAAGCCTCCAAAGAAGGATGTACCGGACTCACAGCAGCACCCAGGGCCAG  592

Query 1034  AGAAGAGCAGCAAGGTCTCGGAGCAGCTCAAGTGCTGCAGCGGCATCCTCAAGGAGATGTTTGCCAAGAAGCAC  1107
            ||||||||||||||.||||.||||||||.|||||||||||.|||||||||||||||||||||||||||||.||.
Sbjct  593  AGAAGAGCAGCAAGATCTCTGAGCAGCTAAAGTGCTGCAGTGGCATCCTCAAGGAGATGTTTGCCAAGAAACAT  666

Query 1108  GCCGCCTACGCCTGGCCCTTCTACAAGCCTGTGGACGTGGAGGCACTGGGCCTACACGACTACTGTGACATCAT  1181
            ||.|||||.||||||||.|||||||||||||||||.||||||||||||||.||.||||||||||||||||||||
Sbjct  667  GCTGCCTATGCCTGGCCTTTCTACAAGCCTGTGGATGTGGAGGCACTGGGTCTGCACGACTACTGTGACATCAT  740

Query 1182  CAAGCACCCCATGGACATGAGCACAATCAAGTCTAAACTGGAGGCCCGTGAGTACCGTGATGCTCAGGAGTTTG  1255
            |||.||.||||||||||||||||||||||||||||||||.|||.||||.||||||.|.|||||.|||||.||||
Sbjct  741  CAAACATCCCATGGACATGAGCACAATCAAGTCTAAACTAGAGTCCCGAGAGTACAGAGATGCCCAGGAATTTG  814

Query 1256  GTGCTGACGTCCGATTGATGTTCTCCAACTGCTATAAGTACAACCCTCCTGACCATGAGGTGGTGGCCATGGCC  1329
            |||||||.||||||||||||||||||||||||||.|||||||||||.|||||||||||.|||||.||||||||.
Sbjct  815  GTGCTGATGTCCGATTGATGTTCTCCAACTGCTACAAGTACAACCCCCCTGACCATGAAGTGGTAGCCATGGCT  888

Query 1330  CGCAAGCTCCAGGATGTGTTCGAAATGCGCTTTGCCAAGATGCCGGACGAGCCTGAGGAGCCAGTGGTGGCCGT  1403
            ||.||.||||||||||||||.|||||||||||||||||||||||.||.||||||||.||||||||.||..|.||
Sbjct  889  CGAAAACTCCAGGATGTGTTTGAAATGCGCTTTGCCAAGATGCCTGATGAGCCTGAAGAGCCAGTTGTTACAGT  962

Query 1404  GTCCTCCCCGGCAGTGCCCCCTCCCACCAAGGTTGTGGCCCCGCCCTCATCCAGCGACAGCAGCAGCGATAGCT  1477
            ||||||.||.||||||||.||.||.||.|||||.||.|||||.||||||||.||.||||||||||||||.||.|
Sbjct  963  GTCCTCTCCTGCAGTGCCACCCCCTACAAAGGTGGTAGCCCCACCCTCATCTAGTGACAGCAGCAGCGACAGTT  1036

Query 1478  CCTCGGACAGTGACAGTTCGACTGATGACTCTGAGGAGGAGCGAGCCCAGCGGCTGGCTGAGCTCCAGGAGCAG  1551
            |.||.|||||.||||||||.|||||.|||||||||||.|||||||||||||||||||||||.||||||||.|||
Sbjct 1037  CTTCCGACAGCGACAGTTCCACTGACGACTCTGAGGAAGAGCGAGCCCAGCGGCTGGCTGAACTCCAGGAACAG  1110

Query 1552  CTCAAAGCCGTGCACGAGCAGCTTGCAGCCCTCTCTCAGCCCCAGCAGAACAAACCAAAGAAAAAGGAGAAAGA  1625
            |||||.||||||||.||||||||||||||||||||.|||||||||||||||||||||||||||||||||||.||
Sbjct 1111  CTCAAGGCCGTGCATGAGCAGCTTGCAGCCCTCTCACAGCCCCAGCAGAACAAACCAAAGAAAAAGGAGAAGGA  1184

Query 1626  CAAGAAGGAAAAGAAAAAAGAAAAGCACAAAAGGAAAGAGGAAGTGGAAGAGAATAAAAAAAGCAAAGCCAAGG  1699
            ||||||||||||||||||.|||||||||||||.||||||.||||||||.||.|||||||||||||||.||||||
Sbjct 1185  CAAGAAGGAAAAGAAAAAGGAAAAGCACAAAAAGAAAGAAGAAGTGGAGGAAAATAAAAAAAGCAAAACCAAGG  1258

Query 1700  AACCTCCTCCTAAAAAGACGAAGAAAAATAATAGCAGCAACAGCAATGTGAGCAAGAAGGAGCCAGCGCCCATG  1773
            |||.||||||.||||||||.|||||||||||.|||||||||||||||||||||||||||||.||||..||||.|
Sbjct 1259  AACTTCCTCCCAAAAAGACAAAGAAAAATAACAGCAGCAACAGCAATGTGAGCAAGAAGGAACCAGTACCCACG  1332

Query 1774  AAGAGCAAGCCCCCTCCCACGTATGAGTCGGAGGAAGAGGACAAGTGCAAGCCTATGTCCTATGAGGAGAAGCG  1847
            ||||.||||||.||||||||.|||||.||.||.||.|||||.|||||.|||||.|||||.||||||||||||||
Sbjct 1333  AAGACCAAGCCGCCTCCCACATATGAATCAGAAGAGGAGGATAAGTGTAAGCCCATGTCTTATGAGGAGAAGCG  1406

Query 1848  GCAGCTCAGCTTGGACATCAACAAGCTCCCCGGCGAGAAGCTGGGCCGCGTGGTGCACATCATCCAGTCACGGG  1921
            ||||||.||..|.||.||||||||.||.||.||.||||||||.|||||.||.||.|||||.||.||||||.|||
Sbjct 1407  GCAGCTAAGTCTAGATATCAACAAACTTCCTGGTGAGAAGCTAGGCCGTGTAGTACACATAATTCAGTCAAGGG  1480

Query 1922  AGCCCTCCCTGAAGAATTCCAACCCCGACGAGATTGAAATCGACTTTGAGACCCTGAAGCCGTCCACACTGCGT  1995
            |.||.||.||.||.||.|||||||||||.||||||||.||.||||||||||||||||||||.||.|||||.||.
Sbjct 1481  AACCATCACTTAAAAACTCCAACCCCGATGAGATTGAGATTGACTTTGAGACCCTGAAGCCATCTACACTACGA  1554

Query 1996  GAGCTGGAGCGCTATGTCACCTCCTGTTTGCGGAAGAAAAGGAAACCTCAAGCTGAGAAAGTTGATGTGATTGC  2069
            |||.|||||||.||||||||||||||||||||||||||||||||||||||||||||.||||||||.||||||||
Sbjct 1555  GAGTTGGAGCGATATGTCACCTCCTGTTTGCGGAAGAAAAGGAAACCTCAAGCTGAAAAAGTTGACGTGATTGC  1628

Query 2070  CGGCTCCTCCAAGATGAAGGGCTTCTCGTCCTCAGAGTCGGAGAGCTCCAGTGAGTCCAGCTCCTCTGACAGCG  2143
            .||.||.||||||||||||||.|||||.|||||.||||||||||||.||||.||.|||||||||||||||||.|
Sbjct 1629  TGGTTCTTCCAAGATGAAGGGATTCTCATCCTCTGAGTCGGAGAGCACCAGCGAATCCAGCTCCTCTGACAGTG  1702

Query 2144  AAGACTCCGAAACA------GCT----------------------------------------------TTCTG  2165
            |||||||.||||||      |||                                              .||..
Sbjct 1703  AAGACTCTGAAACAGAGATGGCTCCCAAGTCAAAAAAGAAGGGGCACACTGGGAGGGACCAGAAAAAGCATCAT  1776

Query 2166  CACCA-------------GTGGAG--------ACTTCGTGT-CCCCAG----------------------GGCC  2195
            |||||             .||.||        |..||.||| ||||||                      .|||
Sbjct 1777  CACCATCACCATCCACAGATGCAGCCAGCCCCAGCTCCTGTGCCCCAGCAGCCGCCCCCACCTCCACAGCAGCC  1850

Query 2196  T--TCC----------CCGTATCA-CAGTCACGTGCAG--------------------TGCGGCC-----GCTT  2231
            |  |||          |||.|.|| ||| ||   ||||                    |.||.||     ||..
Sbjct 1851  TCCTCCACCCCCACCTCCGCAGCAGCAG-CA---GCAGCAACCTCCACCCCCACCACCTCCGCCCTCCATGCCA  1920

Query 2232  CAG-----------GGAGATG-------------------------CTTCGCTGGT-----TTCTGGTGGATGT  2264
            |||           .|.||||                         ||.|.|.|||     |.||||       
Sbjct 1921  CAGCAGACTGCCCCAGCGATGAAGTCCTCGCCCCCACCCTTCATCACTGCCCAGGTCCCCGTCCTGG-------  1987

Query 2265  GGAGCAGACTGCAGCTGGCCA----------------------GCCGCATC-----GCCAGTCT----------  2301
                  .||..||||| ||||                      |||.|.||     |||..|||          
Sbjct 1988  ------AACCACAGCT-GCCAGGCAGTGTCTTTGACCCTATTGGCCACTTCACCCAGCCCATCTTGCACCTGCC  2054

Query 2302  GCTGCTGGCCCTGC--CATCACCTGGGCCCCAGCCATTGCCT---------ACCCCTCCCCAGAGTGTGCTC--  2362
            ||.||.||..||||  |.||||||  ||||||||||   |||         ||.||.|||||      .|||  
Sbjct 2055  GCAGCCGGAGCTGCCTCCTCACCT--GCCCCAGCCA---CCTGAGCACAGCACTCCACCCCA------TCTCAA  2117

Query 2363  ----GTTGCTGTGTTGGCTGCTCC--------------------------------------------------  2382
                ..|||||||.|..||.||||                                                  
Sbjct 2118  CCAGCATGCTGTGGTCTCTCCTCCAGCTTTGCACAATGCGCTGCCCCAACAGCCATCTCGGCCCAGTAACCGAG  2191

Query 2383  --------------------------------------------------------------------------  2382
                                                                                      
Sbjct 2192  CTGCTGCTCTGCCCCCAAAGCCTACCCGACCCCCAGCTGTGTCCCCTGCCCTGGCCCAGCCCCCCCTGCTCCCA  2265

Query 2383  --------------------------------------------------------------------------  2382
                                                                                      
Sbjct 2266  CAACCACCAATGGCTCAGCCCCCCCAAGTGCTGCTGGAGGATGAAGAGCCACCTGCCCCACCCCTCACCTCCAT  2339

Query 2383  --------------------------------------------------------------------------  2382
                                                                                      
Sbjct 2340  GCAGATGCAGTTGTACCTACAGCAGCTGCAGAAGGTGCAGCCTCCCACACCACTACTCCCTTCCGTGAAGGTGC  2413

Query 2383  --------------------------------------------------------------------------  2382
                                                                                      
Sbjct 2414  AGTCCCAACCCCCACCGCCTTTGCCGCCTCCACCCCACCCTTCTGTGCAGCAGCAGCAGCTCCAGCCACAGCCA  2487

Query 2383  --------------------------------------------------------------------------  2382
                                                                                      
Sbjct 2488  CCGCCACCCCCACCTCCTCAGCCACAGCCACCACCCCAGCAACAACACCAGCCTCCACCACGACCAGTTCACTT  2561

Query 2383  --------------------------------------------------------------------------  2382
                                                                                      
Sbjct 2562  GCCATCCATGCCCTTTTCTGCTCATATTCAGCAGCCCCCACCACCCCCAGGACAGCAACCTACTCACCCACCCC  2635

Query 2383  --------------------------------------------------------------------------  2382
                                                                                      
Sbjct 2636  CAGGACAGCAGCCCCCACCACCACAGCCTGCCAAGCCCCAGCAAGTCATCCAGCATCACCCTTCCCCCCGGCAC  2709

Query 2383  --------------------------------------------------------------------------  2382
                                                                                      
Sbjct 2710  CACAAGTCAGACCCCTACTCAGCTGGTCATCTTCGTGAGGCTCCCTCTCCGCTTATGATACATTCCCCTCAGAT  2783

Query 2383  --------------------------------------------------------------------------  2382
                                                                                      
Sbjct 2784  GCCACAGTTCCAGAGCCTGACCCATCAGTCTCCTCCCCAGCAAAACGTCCAGCCTAAGAAGCAGGTAAAGGGCA  2857

Query 2383  --------------------------------------------------------------------------  2382
                                                                                      
Sbjct 2858  GGGCTGAGCCACAGCCACCAGGGCCAGTCATGGGCCAAGGCCAGGGATGCCCACCTGCCTCACCGGCTGCCGTG  2931

Query 2383  --------------------------------------------------------------------------  2382
                                                                                      
Sbjct 2932  CCTATGCTGTCCCAGGAGCTGCGACCACCTTCAGTCGTCCAGCCCCAGCCCCTGGTGGTAGTAAAGGAGGAGAA  3005

Query 2383  --------------------------------------------------------------------------  2382
                                                                                      
Sbjct 3006  GATTCACTCACCAATCATTCGCAGCGAGCCTTTCAGCACCTCACTTCGACCAGAGCCCCCCAAGCACCCAGAGA  3079

Query 2383  --------------------------------------------------------------------------  2382
                                                                                      
Sbjct 3080  ACATCAAGGCCCCAGTCCACCTGCCCCAGCGGCCTGAGATGAAGCCTGTAGACATAGGGAGGCCTGTGATCCGG  3153

Query 2383  --------------------------------------------------------------------------  2382
                                                                                      
Sbjct 3154  CCTCCAGAGCAGAGTGCACCCCCACCAGGGGCCCCTGACAAGGACAAACAGAAGCAGGAGCCAAAAACACCAGT  3227

Query 2383  --------------------------------------------------------------------------  2382
                                                                                      
Sbjct 3228  GGCACCCAAAAAGGACCTGAAAATTAAGAACATGGGCTCCTGGGCCAGCCTGGTACAGAAGCATCCGACCACCC  3301

Query 2383  --------------------------------------------------------------------------  2382
                                                                                      
Sbjct 3302  CATCCTCCACAGCCAAGTCCTCAAGTGACAGCTTTGAGCATTTCCGCCGTGCTGCTCGGGAGAAGGAGGAGAGG  3375

Query 2383  --------------------------------------------------------------------------  2382
                                                                                      
Sbjct 3376  GAAAAGGCCCTGAAGGCTCAGGCTGAGCATGCAGAGAAGGAGAAGGAGCGGCTGAGGCAGGAGCGCATGAGGAG  3449

Query 2383  --------------------------------------------------------------------------  2382
                                                                                      
Sbjct 3450  CCGAGAGGATGAAGATGCGCTGGAACAGGCACGTCGAGCCCATGAGGAGGCACGACGGCGCCAGGAGCAGCAGC  3523

Query 2383  --------------------------------------------------------------------------  2382
                                                                                      
Sbjct 3524  AGCAGCAGCAGCAGCAGAGACAGGAGCAGCAGCAGCAGCAGCAGCAGGCAGCTGCTGTGGCCGCTGCCTCTGCC  3597

Query 2383  --------------------------------------------------------------------------  2382
                                                                                      
Sbjct 3598  CCCCAGGCCCAGAGCTCCCAGCCCCAGTCTATGCTGGACCAGCAGAGGGAGTTGGCCCGGAAACGAGAGCAGGA  3671

Query 2383  --------------------------------------------------------------------------  2382
                                                                                      
Sbjct 3672  GCGGAGGCGCAGGGAGGCAATGGCAGCTACAATTGACATGAATTTCCAGAGTGATCTTTTGTCAATATTTGAAG  3745

Query 2383  -----------  2382
                       
Sbjct 3746  AAAATCTTTTT  3756

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