Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11742
- Subject:
- XM_005263910.1
- Aligned Length:
- 5717
- Identities:
- 766
- Gaps:
- 4948
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGGGAAGCGGGCGGGAGGAGGAGCAACCGGAGCCACCACCGCCGCCGTCTCCACGTCCGCCGGGGCCGGGCT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGAACCTGCGGCCGCCCGTAGCGGGGGCCCGCGGAGCGCGGCCGCCGGCCTCCTAGGCGCGCTGCACCTGGTGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGACCCTCGTAGTGGCTGCGGCGCGGGCCGAGAAGGAAGCATTCGTTCAGTCAGAGAGCATAATAGAAGTACTG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CGTTTTGATGATGGAGGGCTACTACAGATCCTTTGCATTGAGTATCTGCTTATCTTTCACAAGACAGCTTCCTC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 ATTTACCGAGACAACACTTGGACTCAGTTCATATCAGCAGAAAAGTATATCTCTCTACCGGGGGAATTGCAGGC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CCATACGATTTGAGCCACCAATGCTGGATTTCCATGAACAACCAGTTGGAATGCCAAAAATGGAAAAAGTCTAC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TTACATAATCCTAGTTCTGAAGAAACGATTACTTTAGTATCAATATCTGCTACAACATCACATTTTCATGCATC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 ATTTTTTCAAAATAGGAAAATTCTTCCAGGAGGAAATACATCATTTGATGTAGTTTTTCTTGCAAGAGTAGTAG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GAAATGTAGAAAATACTTTATTTATTAATACATCTAATCATGGGGTATTTACTTACCAGGTATTTGGTGTTGGA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GTTCCAAATCCATATCGATTGAGGCCGTTCCTTGGGGCCAGAGTCCCTGTGAATAGCAGTTTCTCACCTATAAT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AAACATCCACAATCCTCACAGTGAGCCTTTACAGGTTGTAGAAATGTACTCTAGTGGAGGAGACCTTCACCTAG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AACTCCCAACGGGTCAACAAGGAGGTACCAGAAAACTGTGGGAAATTCCTCCTTATGAAACCAAGGGAGTGATG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AGAGCCAGTTTTTCATCTAGAGAAGCAGATAATCACACAGCCTTCATAAGAATAAAGACTAATGCTTCAGACAG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CACAGAGTTTATCATTCTTCCTGTTGAGGTTGAAGTTACAACAGCTCCTGGAATTTATTCCTCAACTGAAATGT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TAGATTTTGGTACACTAAGAACACAAGATCTACCAAAAGTTTTAAACCTTCATTTATTAAATTCAGGAACAAAA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GATGTACCAATAACAAGTGTTCGACCTACACCACAAAATGATGCTATAACGGTACACTTTAAACCAATTACATT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AAAAGCATCAGAAAGTAAATACACCAAGGTTGCAAGCATTAGTTTTGATGCATCGAAGGCAAAAAAGCCATCTC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 AGTTTTCTGGGAAAATAACAGTTAAAGCAAAGGAAAAGAGTTATTCTAAACTTGAAATACCATATCAAGCAGAA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GTTTTAGATGGTTATTTGGGATTTGATCATGCTGCAACATTATTTCACATCCGAGACAGCCCTGCTGATCCTGT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GGAAAGGCCAATTTACCTTACTAACACTTTCAGTTTTGCGATCCTCATTCACGATGTGTTGCTACCAGAAGAAG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CCAAAACAATGTTTAAAGTTCACAACTTCAGCAAACCAGTCTTAATTCTTCCTAATGAATCAGGATACATTTTT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 ACCCTGCTTTTTATGCCTTCCACATCATCCATGCACATTGATAACAACATTTTACTTATTACCAATGCTTCTAA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 ATTTCATTTACCCGTGCGGGTATACACAGGCTTTTTAGATTACTTTGTATTGCCCCCCAAAATAGAGGAACGTT 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TCATAGATTTTGGAGTACTGAGTGCTACAGAAGCAAGTAATATTTTATTTGCAATTATAAACAGCAATCCAATT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GAGTTGGCTATAAAAAGTTGGCATATCATAGGAGACGGTTTATCAATAGAACTTGTAGCTGTGGAAAGAGGCAA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TAGAACTACAATAATTTCAAGCCTGCCAGAGTTTGAAAAATCCTCTTTATCAGATCAATCATCGGTAACATTAG 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CTTCAGGCTATTTTGCAGTCTTCAGAGTCAAACTTACTGCAAAAAAATTAGAGGGGATTCATGATGGAGCCATC 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 CAGATCACAACAGACTATGAGATCCTGACAATCCCTGTGAAGGCTGTGATTGCAGTAGGCTCACTGACCTGCTT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CCCTAAGCACGTGGTTCTTCCACCTTCCTTTCCAGGGAAAATAGTTCATCAAAGTTTAAATATTATGAATTCCT 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 TCTCACAGAAGGTAAAAATACAGCAAATACGATCTTTGTCAGAAGATGTGCGATTTTACTATAAACGATTACGG 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GGCAATAAGGAAGACTTGGAGCCAGGAAAAAAATCAAAGATTGCAAACATTTATTTTGATCCTGGACTACAGTG 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 TGGGGATCATTGCTATGTTGGCTTGCCTTTTCTATCCAAATCTGAACCCAAAGTGCAGCCTGGTGTAGCCATGC 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 AGGAAGATATGTGGGATGCTGACTGGGATTTGCATCAAAGCCTGTTCAAGGGATGGACAGGAATAAAGGAAAAT 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 TCAGGTCATAGATTGAGTGCTATATTTGAAGTAAATACAGACCTTCAAAAAAATATAATATCAAAAATCACTGC 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 TGAGCTCTCCTGGCCTTCCATACTTAGCTCACCCCGGCACTTGAAATTTCCACTTACTAATACAAACTGCTCCT 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 CAGAAGAAGAGATTACTTTAGAAAATCCTGCAGATGTTCCTGTCTATGTTCAGTTTATTCCTCTGGCTTTATAT 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 TCCAACCCTTCAGTGTTTGTAGATAAGTTAGTATCAAGGTTTAACTTGAGTAAGGTGGCAAAGATAGATTTGAG 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 AACACTAGAATTTCAAGTCTTCAGAAACAGTGCTCATCCACTGCAGAGTTCAACAGGATTTATGGAGGGCCTCT 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 CTCGACATTTAATTTTAAACCTAATTTTAAAACCTGGAGAAAAGAAATCTGTCAAAGTAAAGTTTACTCCAGTT 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 CACAACAGAACTGTTTCTTCACTTATCATAGTCAGAAATAACCTGACTGTGATGGATGCTGTGATGGTCCAAGG 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 ACAAGGAACAACTGAGAACTTGAGGGTGGCAGGCAAGCTTCCAGGTCCAGGAAGCTCCTTACGCTTTAAAATCA 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 CGGAAGCATTGTTAAAAGATTGTACAGATAGTTTAAAACTAAGAGAACCAAATTTCACATTGAAAAGAACATTT 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 AAGGTAGAGAATACAGGACAACTTCAAATTCACATAGAAACCATTGAAATCAGTGGATACTCATGTGAAGGATA 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 TGGCTTTAAAGTTGTTAATTGTCAAGAGTTTACTCTAAGTGCCAATGCTTCTAGAGATATAATCATATTGTTTA 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 CTCCTGATTTTACAGCTTCTAGAGTTATTCGGGAACTGAAGTTTATAACAACCAGTGGCTCTGAGTTTGTATTT 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 ATATTGAATGCATCCCTTCCTTACCATATGTTAGCAACCTGTGCAGAAGCCCTACCCAGACCTAACTGGGAACT 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 GGCTCTGTATATCATCATCTCAGGAATAATGAGTGCACTGTTTCTTTTGGTCATTGGAACAGCCTATTTGGAAG 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 CTCAAGGAATATGGGAGCCATTTCGAAGGCGGCTATCCTTTGAGGCCTCGAACCCGCCCTTCGATGTGGGAAGG 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 CCATTTGATCTCAGGAGAATCGTTGGTATTTCATCTGAAGGAAACTTGAACACACTCAGCTGTGACCCCGGTCA 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 CAGTAGGGGGTTCTGTGGAGCAGGCGGTTCATCATCCCGACCCAGTGCCGGGAGTCATAAGCAGTGTGGCCCAT 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 CGGTCCACCCACACAGCAGTCACAGCAATAGAAACTCAGCTGACGTGGAAAACGTCAGAGCCAAAAACAGTTCA 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 AGTACCTCTAGTAGGACTTCTGCTCAAGCAGCTTCTTCACAGTCTGCTAACAAAACAAGCCCCCTTGTCTTAGA 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 TTCGAACACAGTGACTCAAGGTCATACAGCGGGCAGAAAGTCCAAAGGGGCAAAGCAGAGCCAGCACGGCAGCC 3922
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3923 AGCACCATGCCCACAGCCCGCTGGAGCAGCACCCTCAGCCTCCTCTGCCACCGCCAGTGCCTCAGCCCCAGGAG 3996
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3997 CCGCAGCCTGAAAGGCTGTCTCCCGCCCCCCTCGCACACCCTTCCCACCCAGAACGTGCCAGCAGCGCGAGGCA 4070
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4071 CAGTTCCGAGGACTCGGACATCACCAGTCTCATAGAAGCCATGGACAAAGACTTCGACCACCATGACTCCCCAG 4144
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4145 CCCTAGAAGTGTTTACAGAGCAGCCTCCATCGCCATTGCCAAAAAGCAAAGGGAAAGGAAAACCTCTTCAGCGC 4218
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4219 AAGGTGAAACCACCTAAGAAGCAAGAGGAAAAGGAGAAGAAGGGAAAGGGAAAGCCACAGGAAGATGAGCTGAA 4292
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4293 GGACTCTTTGGCTGATGATGATAGCTCCTCCACCACCACAGAGACCTCCAACCCTGACACAGAACCGCTCCTCA 4366
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4367 AGGAGGATACAGAAAAGCAAAAGGGAAAACAAGCCATGCCTGAAAAACATGAAAGTGAAATGTCTCAAGTGAAG 4440
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4441 CAAAAAAGCAAAAAACTCTTAAATATTAAGAAAGAAATCCCAACAGATGTGAAACCCAGTTCATTAGAACTACC 4514
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4515 ATATACTCCCCCTTTGGAAAGTAAGCAACGTAGAAATCTCCCAAGCAAGATTCCTCTTCCAACTGCAATGACAA 4588
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4589 GTGGATCCAAATCACGAAATGCCCAGAAAACAAAAGGTACAAGTAAGTTAGTGGATAACAGACCACCTGCCCTA 4662
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4663 GCAAAATTCCTCCCGAATAGTCAAGAATTAGGCAACACCAGTAGCTCAGAGGGTGAAAAAGACTCTCCTCCACC 4736
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4737 GGAGTGGGATTCCGTTCCAGTTCACAAACCTGGCAGCTCTACTGATAGTCTTTATAAACTTTCTCTGCAAACCC 4810
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4811 TCAACGCAGACATTTTCTTAAAACAACGCCAGACCTCACCGACACCTGCTTCCCCGTCTCCCCCAGCTGCCCCC 4884
Query 1 ------------------------------------------ATGAGTTCTCTCTTTGCTTCTTTTTCA--AGT 30
|..||.|| || |||
Sbjct 4885 TGCCCCTTTGTGGCCCGGGGCAGCTACAGCAGCATCGTCAACAGCAGCTC-----------------CAGCAGT 4941
Query 31 GACCCTAAAATAAAACAGCCAAATGGAAGCAAACACAAGTTGACAAAGGCAGCCTCGCTCCCGGGCAAGAACGG 104
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4942 GACCCTAAAATAAAACAGCCAAATGGAAGCAAACACAAGTTGACAAAGGCAGCCTCGCTCCCGGGCAAGAACGG 5015
Query 105 CAACCCCACTTTTGCTGCAGTCACGGCTGGCTACGACAAGAGCCCAGGTGGGAATGGCTTTGCTAAAGTTTCTT 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5016 CAACCCCACTTTTGCTGCAGTCACGGCTGGCTACGACAAGAGCCCAGGTGGGAATGGCTTTGCTAAAGTTTCTT 5089
Query 179 CAAACAAAACAGGTTTCTCCAGCAGCCTTGGCATTTCACACGCTCCTGTTGACAGCGATGGCTCAGACAGCTCG 252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5090 CAAACAAAACAGGTTTCTCCAGCAGCCTTGGCATTTCACACGCTCCTGTTGACAGCGATGGCTCAGACAGCTCG 5163
Query 253 GGTTTGTGGAGTCCCGTCAGCAACCCAAGCAGCCCTGACTTCACTCCCCTCAATTCGTTCTCCGCCTTTGGAAA 326
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5164 GGTTTGTGGAGTCCCGTCAGCAACCCAAGCAGCCCTGACTTCACTCCCCTCAATTCGTTCTCCGCCTTTGGAAA 5237
Query 327 CTCTTTTAATCTAACTGGTGAAGTTTTCAGCAAACTCGGATTATCTCGATCGTGCAATCAGGCCTCACAGAGGA 400
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5238 CTCTTTTAATCTAACTGGT---GTTTTCAGCAAACTCGGATTATCTCGATCGTGCAATCAGGCCTCACAGAGGA 5308
Query 401 GCTGGAACGAGTTTAATAGTGGCCCTTCATACCTTTGGGAGTCGCCAGCGACAGATCCCAGTCCTTCCTGGCCA 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5309 GCTGGAACGAGTTTAATAGTGGCCCTTCATACCTTTGGGAGTCGCCAGCGACAGATCCCAGTCCTTCCTGGCCA 5382
Query 475 GCCAGTTCCGGCTCCCCGACCCACACAGCCACATCGGTCCTCGGTAACACCAGCGGCCTGTGGTCCACCACTCC 548
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5383 GCCAGTTCCGGCTCCCCGACCCACACAGCCACATCGGTCCTCGGTAACACCAGCGGCCTGTGGTCCACCACTCC 5456
Query 549 ATTCAGCAGCTCCATTTGGTCCAGCAACCTTAGCAGCGCCCTTCCCTTCACCACTCCAGCAAACACGCTGGCAA 622
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5457 ATTCAGCAGCTCCATTTGGTCCAGCAACCTTAGCAGCGCCCTTCCCTTCACCACTCCAGCAAACACGCTGGCAA 5530
Query 623 GCATCGGCCTCATGGGCACAGAAAACTCCCCTGCTCCTCACGCTCCCTCCACCTCCAGTCCAGCTGACGACTTG 696
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5531 GCATCGGCCTCATGGGCACAGAAAACTCCCCTGCTCCTCACGCTCCCTCCACCTCCAGTCCAGCTGACGACTTG 5604
Query 697 GGACAGACCTACAACCCGTGGCGGATATGGAGCCCCACGATTGGAAGAAGAAGCTCGGACCCTTGGTCTAATTC 770
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5605 GGACAGACCTACAACCCGTGGCGGATATGGAGCCCCACGATTGGAAGAAGAAGCTCGGACCCTTGGTCTAATTC 5678
Query 771 GCACTTTCCTCACGAGAAT 789
|||||||||||||||||||
Sbjct 5679 GCACTTTCCTCACGAGAAT 5697
