Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11742
- Subject:
- XM_005263911.1
- Aligned Length:
- 5600
- Identities:
- 769
- Gaps:
- 4828
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGGGAAGCGGGCGGGAGGAGGAGCAACCGGAGCCACCACCGCCGCCGTCTCCACGTCCGCCGGGGCCGGGCT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGAACCTGCGGCCGCCCGTAGCGGGGGCCCGCGGAGCGCGGCCGCCGGCCTCCTAGGCGCGCTGCACCTGGTGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGACCCTCGTAGTGGCTGCGGCGCGGGCCGAGAAGGAAGCATTCGTTCAGTCAGAGAGCATAATAGAAGTACTG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CGTTTTGATGATGGAGGGCTACTACAGATCCTTTGCATTGAGTATCTGCTTATCTTTCACAAGACAGCTTCCTC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 ATTTACCGAGACAACACTTGGACTCAGTTCATATCAGCAGAAAAGTATATCTCTCTACCGGGGGAATTGCAGGC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CCATACGATTTGAGCCACCAATGCTGGATTTCCATGAACAACCAGTTGGAATGCCAAAAATGGAAAAAGTCTAC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TTACATAATCCTAGTTCTGAAGAAACGATTACTTTAGTATCAATATCTGCTACAACATCACATTTTCATGCATC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 ATTTTTTCAAAATAGGGTATTTGGTGTTGGAGTTCCAAATCCATATCGATTGAGGCCGTTCCTTGGGGCCAGAG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TCCCTGTGAATAGCAGTTTCTCACCTATAATAAACATCCACAATCCTCACAGTGAGCCTTTACAGGTTGTAGAA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 ATGTACTCTAGTGGAGGAGACCTTCACCTAGAACTCCCAACGGGTCAACAAGGAGGTACCAGAAAACTGTGGGA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AATTCCTCCTTATGAAACCAAGGGAGTGATGAGAGCCAGTTTTTCATCTAGAGAAGCAGATAATCACACAGCCT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TCATAAGAATAAAGACTAATGCTTCAGACAGCACAGAGTTTATCATTCTTCCTGTTGAGGTTGAAGTTACAACA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GCTCCTGGAATTTATTCCTCAACTGAAATGTTAGATTTTGGTACACTAAGAACACAAGATCTACCAAAAGTTTT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AAACCTTCATTTATTAAATTCAGGAACAAAAGATGTACCAATAACAAGTGTTCGACCTACACCACAAAATGATG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CTATAACGGTACACTTTAAACCAATTACATTAAAAGCATCAGAAAGTAAATACACCAAGGTTGCAAGCATTAGT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TTTGATGCATCGAAGGCAAAAAAGCCATCTCAGTTTTCTGGGAAAATAACAGTTAAAGCAAAGGAAAAGAGTTA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TTCTAAACTTGAAATACCATATCAAGCAGAAGTTTTAGATGGTTATTTGGGATTTGATCATGCTGCAACATTAT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TTCACATCCGAGACAGCCCTGCTGATCCTGTGGAAAGGCCAATTTACCTTACTAACACTTTCAGTTTTGCGATC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CTCATTCACGATGTGTTGCTACCAGAAGAAGCCAAAACAATGTTTAAAGTTCACAACTTCAGCAAACCAGTCTT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 AATTCTTCCTAATGAATCAGGATACATTTTTACCCTGCTTTTTATGCCTTCCACATCATCCATGCACATTGATA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 ACAACATTTTACTTATTACCAATGCTTCTAAATTTCATTTACCCGTGCGGGTATACACAGGCTTTTTAGATTAC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TTTGTATTGCCCCCCAAAATAGAGGAACGTTTCATAGATTTTGGAGTACTGAGTGCTACAGAAGCAAGTAATAT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TTTATTTGCAATTATAAACAGCAATCCAATTGAGTTGGCTATAAAAAGTTGGCATATCATAGGAGACGGTTTAT 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CAATAGAACTTGTAGCTGTGGAAAGAGGCAATAGAACTACAATAATTTCAAGCCTGCCAGAGTTTGAAAAATCC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TCTTTATCAGATCAATCATCGGTAACATTAGCTTCAGGCTATTTTGCAGTCTTCAGAGTCAAACTTACTGCAAA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 AAAATTAGAGGGGATTCATGATGGAGCCATCCAGATCACAACAGACTATGAGATCCTGACAATCCCTGTGAAGG 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CTGTGATTGCAGTAGGCTCACTGACCTGCTTCCCTAAGCACGTGGTTCTTCCACCTTCCTTTCCAGGGAAAATA 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GTTCATCAAAGTTTAAATATTATGAATTCCTTCTCACAGAAGGTAAAAATACAGCAAATACGATCTTTGTCAGA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 AGATGTGCGATTTTACTATAAACGATTACGGGGCAATAAGGAAGACTTGGAGCCAGGAAAAAAATCAAAGATTG 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 CAAACATTTATTTTGATCCTGGACTACAGTGTGGGGATCATTGCTATGTTGGCTTGCCTTTTCTATCCAAATCT 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GAACCCAAAGTGCAGCCTGGTGTAGCCATGCAGGAAGATATGTGGGATGCTGACTGGGATTTGCATCAAAGCCT 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 GTTCAAGGGATGGACAGGAATAAAGGAAAATTCAGGTCATAGATTGAGTGCTATATTTGAAGTAAATACAGACC 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TTCAAAAAAATATAATATCAAAAATCACTGCTGAGCTCTCCTGGCCTTCCATACTTAGCTCACCCCGGCACTTG 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 AAATTTCCACTTACTAATACAAACTGCTCCTCAGAAGAAGAGATTACTTTAGAAAATCCTGCAGATGTTCCTGT 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 CTATGTTCAGTTTATTCCTCTGGCTTTATATTCCAACCCTTCAGTGTTTGTAGATAAGTTAGTATCAAGGTTTA 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 ACTTGAGTAAGGTGGCAAAGATAGATTTGAGAACACTAGAATTTCAAGTCTTCAGAAACAGTGCTCATCCACTG 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 CAGAGTTCAACAGGATTTATGGAGGGCCTCTCTCGACATTTAATTTTAAACCTAATTTTAAAACCTGGAGAAAA 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 GAAATCTGTCAAAGTAAAGTTTACTCCAGTTCACAACAGAACTGTTTCTTCACTTATCATAGTCAGAAATAACC 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 TGACTGTGATGGATGCTGTGATGGTCCAAGGACAAGGAACAACTGAGAACTTGAGGGTGGCAGGCAAGCTTCCA 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 GGTCCAGGAAGCTCCTTACGCTTTAAAATCACGGAAGCATTGTTAAAAGATTGTACAGATAGTTTAAAACTAAG 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 AGAACCAAATTTCACATTGAAAAGAACATTTAAGGTAGAGAATACAGGACAACTTCAAATTCACATAGAAACCA 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 TTGAAATCAGTGGATACTCATGTGAAGGATATGGCTTTAAAGTTGTTAATTGTCAAGAGTTTACTCTAAGTGCC 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 AATGCTTCTAGAGATATAATCATATTGTTTACTCCTGATTTTACAGCTTCTAGAGTTATTCGGGAACTGAAGTT 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 TATAACAACCAGTGGCTCTGAGTTTGTATTTATATTGAATGCATCCCTTCCTTACCATATGTTAGCAACCTGTG 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 CAGAAGCCCTACCCAGACCTAACTGGGAACTGGCTCTGTATATCATCATCTCAGGAATAATGAGTGCACTGTTT 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 CTTTTGGTCATTGGAACAGCCTATTTGGAAGCTCAAGGAATATGGGAGCCATTTCGAAGGCGGCTATCCTTTGA 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 GGCCTCGAACCCGCCCTTCGATGTGGGAAGGCCATTTGATCTCAGGAGAATCGTTGGTATTTCATCTGAAGGAA 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 ACTTGAACACACTCAGCTGTGACCCCGGTCACAGTAGGGGGTTCTGTGGAGCAGGCGGTTCATCATCCCGACCC 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 AGTGCCGGGAGTCATAAGCAGTGTGGCCCATCGGTCCACCCACACAGCAGTCACAGCAATAGAAACTCAGCTGA 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 CGTGGAAAACGTCAGAGCCAAAAACAGTTCAAGTACCTCTAGTAGGACTTCTGCTCAAGCAGCTTCTTCACAGT 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 CTGCTAACAAAACAAGCCCCCTTGTCTTAGATTCGAACACAGTGACTCAAGGTCATACAGCGGGCAGAAAGTCC 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 AAAGGGGCAAAGCAGAGCCAGCACGGCAGCCAGCACCATGCCCACAGCCCGCTGGAGCAGCACCCTCAGCCTCC 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 TCTGCCACCGCCAGTGCCTCAGCCCCAGGAGCCGCAGCCTGAAAGGCTGTCTCCCGCCCCCCTCGCACACCCTT 3922
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3923 CCCACCCAGAACGTGCCAGCAGCGCGAGGCACAGTTCCGAGGACTCGGACATCACCAGTCTCATAGAAGCCATG 3996
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3997 GACAAAGACTTCGACCACCATGACTCCCCAGCCCTAGAAGTGTTTACAGAGCAGCCTCCATCGCCATTGCCAAA 4070
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4071 AAGCAAAGGGAAAGGAAAACCTCTTCAGCGCAAGGTGAAACCACCTAAGAAGCAAGAGGAAAAGGAGAAGAAGG 4144
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4145 GAAAGGGAAAGCCACAGGAAGATGAGCTGAAGGACTCTTTGGCTGATGATGATAGCTCCTCCACCACCACAGAG 4218
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4219 ACCTCCAACCCTGACACAGAACCGCTCCTCAAGGAGGATACAGAAAAGCAAAAGGGAAAACAAGCCATGCCTGA 4292
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4293 AAAACATGAAAGTGAAATGTCTCAAGTGAAGCAAAAAAGCAAAAAACTCTTAAATATTAAGAAAGAAATCCCAA 4366
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4367 CAGATGTGAAACCCAGTTCATTAGAACTACCATATACTCCCCCTTTGGAAAGTAAGCAACGTAGAAATCTCCCA 4440
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4441 AGCAAGATTCCTCTTCCAACTGCAATGACAAGTGGATCCAAATCACGAAATGCCCAGAAAACAAAAGGTACAAG 4514
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4515 TAAGTTAGTGGATAACAGACCACCTGCCCTAGCAAAATTCCTCCCGAATAGTCAAGAATTAGGCAACACCAGTA 4588
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4589 GCTCAGAGGGTGAAAAAGACTCTCCTCCACCGGAGTGGGATTCCGTTCCAGTTCACAAACCTGGCAGCTCTACT 4662
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4663 GATAGTCTTTATAAACTTTCTCTGCAAACCCTCAACGCAGACATTTTCTTAAAACAACGCCAGACCTCACCGAC 4736
Query 1 -------------------------------------------------------------------------A 1
|
Sbjct 4737 ACCTGCTTCCCCGTCTCCCCCAGCTGCCCCCTGCCCCTTTGTGGCCCGGGGCAGCTACAGCAGCATCGTCAACA 4810
Query 2 TGAGTTCTCTCTTTGCTTCTTTTTCA--AGTGACCCTAAAATAAAACAGCCAAATGGAAGCAAACACAAGTTGA 73
..||.|| || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4811 GCAGCTC-----------------CAGCAGTGACCCTAAAATAAAACAGCCAAATGGAAGCAAACACAAGTTGA 4867
Query 74 CAAAGGCAGCCTCGCTCCCGGGCAAGAACGGCAACCCCACTTTTGCTGCAGTCACGGCTGGCTACGACAAGAGC 147
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4868 CAAAGGCAGCCTCGCTCCCGGGCAAGAACGGCAACCCCACTTTTGCTGCAGTCACGGCTGGCTACGACAAGAGC 4941
Query 148 CCAGGTGGGAATGGCTTTGCTAAAGTTTCTTCAAACAAAACAGGTTTCTCCAGCAGCCTTGGCATTTCACACGC 221
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4942 CCAGGTGGGAATGGCTTTGCTAAAGTTTCTTCAAACAAAACAGGTTTCTCCAGCAGCCTTGGCATTTCACACGC 5015
Query 222 TCCTGTTGACAGCGATGGCTCAGACAGCTCGGGTTTGTGGAGTCCCGTCAGCAACCCAAGCAGCCCTGACTTCA 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5016 TCCTGTTGACAGCGATGGCTCAGACAGCTCGGGTTTGTGGAGTCCCGTCAGCAACCCAAGCAGCCCTGACTTCA 5089
Query 296 CTCCCCTCAATTCGTTCTCCGCCTTTGGAAACTCTTTTAATCTAACTGGTGAAGTTTTCAGCAAACTCGGATTA 369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5090 CTCCCCTCAATTCGTTCTCCGCCTTTGGAAACTCTTTTAATCTAACTGGTGAAGTTTTCAGCAAACTCGGATTA 5163
Query 370 TCTCGATCGTGCAATCAGGCCTCACAGAGGAGCTGGAACGAGTTTAATAGTGGCCCTTCATACCTTTGGGAGTC 443
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5164 TCTCGATCGTGCAATCAGGCCTCACAGAGGAGCTGGAACGAGTTTAATAGTGGCCCTTCATACCTTTGGGAGTC 5237
Query 444 GCCAGCGACAGATCCCAGTCCTTCCTGGCCAGCCAGTTCCGGCTCCCCGACCCACACAGCCACATCGGTCCTCG 517
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5238 GCCAGCGACAGATCCCAGTCCTTCCTGGCCAGCCAGTTCCGGCTCCCCGACCCACACAGCCACATCGGTCCTCG 5311
Query 518 GTAACACCAGCGGCCTGTGGTCCACCACTCCATTCAGCAGCTCCATTTGGTCCAGCAACCTTAGCAGCGCCCTT 591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5312 GTAACACCAGCGGCCTGTGGTCCACCACTCCATTCAGCAGCTCCATTTGGTCCAGCAACCTTAGCAGCGCCCTT 5385
Query 592 CCCTTCACCACTCCAGCAAACACGCTGGCAAGCATCGGCCTCATGGGCACAGAAAACTCCCCTGCTCCTCACGC 665
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5386 CCCTTCACCACTCCAGCAAACACGCTGGCAAGCATCGGCCTCATGGGCACAGAAAACTCCCCTGCTCCTCACGC 5459
Query 666 TCCCTCCACCTCCAGTCCAGCTGACGACTTGGGACAGACCTACAACCCGTGGCGGATATGGAGCCCCACGATTG 739
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5460 TCCCTCCACCTCCAGTCCAGCTGACGACTTGGGACAGACCTACAACCCGTGGCGGATATGGAGCCCCACGATTG 5533
Query 740 GAAGAAGAAGCTCGGACCCTTGGTCTAATTCGCACTTTCCTCACGAGAAT 789
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5534 GAAGAAGAAGCTCGGACCCTTGGTCTAATTCGCACTTTCCTCACGAGAAT 5583
